Regulator ID target symbol target name hgnc_id ensembl_gene_id uniprot ID Entrez_id type type_class cell_line cell_id species cell_disease ICD_disease method PMID GSE log2FoldChange perturbation direction pvalue REG00012 RN7SK RNA component of 7SK nuclear ribonucleoprotein HGNC:10037 ENSG00000283293 . 125050 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RN7SL1 RNA component of signal recognition particle 7SL1 HGNC:10038 ENSG00000276168 . 6029 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.62E+00 . . . REG00012 RN7SL1 RNA component of signal recognition particle 7SL1 HGNC:10038 ENSG00000276168 . 6029 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG3 Small nucleolar RNA host gene 3 HGNC:10118 ENSG00000242125 . 8420 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.86452283 knock down down-regulator 0.016738802 REG00012 SNHG3 Small nucleolar RNA host gene 3 HGNC:10118 ENSG00000242125 . 8420 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.910616871 knock down down-regulator 0.006079256 REG00012 SNHG3 Small nucleolar RNA host gene 3 HGNC:10118 ENSG00000242125 . 8420 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.977165786 knock down down-regulator 0.013877809 REG00012 SNHG3 Small nucleolar RNA host gene 3 HGNC:10118 ENSG00000242125 . 8420 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.787532292 knock down down-regulator 0.005461237 REG00012 SNHG3 Small nucleolar RNA host gene 3 HGNC:10118 ENSG00000242125 . 8420 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.868144235 knock down down-regulator 0.009546126 REG00012 SNHG3 Small nucleolar RNA host gene 3 HGNC:10118 ENSG00000242125 . 8420 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.592789204 knock down down-regulator 0.003160704 REG00012 BCYRN1 Brain cytoplasmic RNA 1 HGNC:1022 ENSG00000236824 . 618 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 BCYRN1 Brain cytoplasmic RNA 1 HGNC:1022 ENSG00000236824 . 618 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.762051571 knock down down-regulator 0.000858589 REG00012 BCYRN1 Brain cytoplasmic RNA 1 HGNC:1022 ENSG00000236824 . 618 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.624408907 knock down down-regulator 0.007408615 REG00012 BCYRN1 Brain cytoplasmic RNA 1 HGNC:1022 ENSG00000236824 . 618 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.662977176 knock down down-regulator 0.001922055 REG00012 SLC22A18AS SLC22A18 antisense RNA HGNC:10965 ENSG00000254827 BWR1B_HUMAN 5003 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLC22A18AS SLC22A18 antisense RNA HGNC:10965 ENSG00000254827 BWR1B_HUMAN 5003 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.059680272 knock down down-regulator 9.58E-05 REG00012 SLC22A18AS SLC22A18 antisense RNA HGNC:10965 ENSG00000254827 BWR1B_HUMAN 5003 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.60892041 knock down down-regulator 0.000441593 REG00012 LINC00597 Long intergenic non-protein coding RNA 597 HGNC:1193 . CO005_HUMAN 81698 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GAS8-AS1 GAS8 antisense RNA 1 HGNC:1197 ENSG00000221819 GAAS1_HUMAN 750 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00470 Long intergenic non-protein coding RNA 470 HGNC:1225 ENSG00000132204 CR002_HUMAN 56651 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.624533461 knock down up-regulate 2.22E-08 REG00012 LINC00113 Long intergenic non-protein coding RNA 113 HGNC:1264 ENSG00000225298 . 54088 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TSPEAR-AS1 TSPEAR antisense RNA 1 HGNC:1271 ENSG00000235890 . 54082 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TSPEAR-AS1 TSPEAR antisense RNA 1 HGNC:1271 ENSG00000235890 . 54082 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 2.252467259 knock down up-regulate 0.000375614 REG00012 TSPEAR-AS1 TSPEAR antisense RNA 1 HGNC:1271 ENSG00000235890 . 54082 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.179760445 knock down down-regulator 0.000491529 REG00012 TSPEAR-AS1 TSPEAR antisense RNA 1 HGNC:1271 ENSG00000235890 . 54082 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.743856736 knock down down-regulator 0.00234275 REG00012 MIR99AHG Mir-99a-let-7c cluster host gene HGNC:1274 ENSG00000215386 . 388815 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.679630572 knock down down-regulator 0.003622543 REG00012 LINC01549 Long intergenic non-protein coding RNA 1549 HGNC:1277 ENSG00000232560 CU037_HUMAN 100505929 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.959802684 knock down up-regulate 0.007566265 REG00012 LINC01549 Long intergenic non-protein coding RNA 1549 HGNC:1277 ENSG00000232560 CU037_HUMAN 100505929 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.00495006 knock down up-regulate 0.040535597 REG00012 C21orf62-AS1 C21orf62 antisense RNA 1 HGNC:1290 ENSG00000205930 CMAS1_HUMAN 54067 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.586488733 knock down down-regulator 7.73E-09 REG00012 C21orf62-AS1 C21orf62 antisense RNA 1 HGNC:1290 ENSG00000205930 CMAS1_HUMAN 54067 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.586488733 knock down down-regulator 7.73E-09 REG00012 LINC01587 Long intergenic non-protein coding RNA 1587 HGNC:13716 ENSG00000082929 CD006_HUMAN 10141 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DLEU2 Deleted in lymphocytic leukemia 2 HGNC:13748 ENSG00000231607 . 8847 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DLEU2 Deleted in lymphocytic leukemia 2 HGNC:13748 ENSG00000231607 . 8847 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.596789244 knock down down-regulator 0.006381715 REG00012 DLEU2 Deleted in lymphocytic leukemia 2 HGNC:13748 ENSG00000231607 . 8847 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.857782734 knock down up-regulate 5.42E-06 REG00012 DLEU2 Deleted in lymphocytic leukemia 2 HGNC:13748 ENSG00000231607 . 8847 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.717488068 knock down down-regulator 0.000222471 REG00012 DLEU2 Deleted in lymphocytic leukemia 2 HGNC:13748 ENSG00000231607 . 8847 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.006012212 knock down down-regulator 2.74E-06 REG00012 IGF2-AS IGF2 antisense RNA HGNC:14062 ENSG00000099869 IG2AS_HUMAN 51214 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.89927883 knock down up-regulate 0.02477746 REG00012 IGF2-AS IGF2 antisense RNA HGNC:14062 ENSG00000099869 IG2AS_HUMAN 51214 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.088189729 knock down down-regulator 0.013136104 REG00012 IGF2-AS IGF2 antisense RNA HGNC:14062 ENSG00000099869 IG2AS_HUMAN 51214 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 4.35676662 knock down up-regulate 0.028003198 REG00012 LINC01621 Long intergenic non-protein coding RNA 1621 HGNC:14109 ENSG00000235357 . 89758 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.232868862 knock down down-regulator 0.04893135 REG00012 LINC00235 Long intergenic non-protein coding RNA 235 HGNC:14138 ENSG00000277142 . 64493 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CFLAR-AS1 CFLAR antisense RNA 1 HGNC:14437 ENSG00000226312 . 65072 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MEG8 Maternally expressed 8, small nucleolar RNA host gene HGNC:14574 ENSG00000225746 . 79104 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.918274325 knock down up-regulate 0.022940367 REG00012 MEG3 Maternally expressed 3 HGNC:14575 ENSG00000214548 . 55384 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.626807056 knock out down-regulator 0.008339769 REG00012 MEG3 Maternally expressed 3 HGNC:14575 ENSG00000214548 . 55384 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.665496596 knock down down-regulator 4.61E-08 REG00012 LINC01547 Long intergenic non-protein coding RNA 1547 HGNC:15707 ENSG00000183250 CU067_HUMAN 84536 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.593942199 knock down up-regulate 0.017876842 REG00012 LINC01547 Long intergenic non-protein coding RNA 1547 HGNC:15707 ENSG00000183250 CU067_HUMAN 84536 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.587990642 knock down up-regulate 0.018795986 REG00012 LINC01547 Long intergenic non-protein coding RNA 1547 HGNC:15707 ENSG00000183250 CU067_HUMAN 84536 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.362098741 knock down down-regulator 0.020424377 REG00012 LINC01547 Long intergenic non-protein coding RNA 1547 HGNC:15707 ENSG00000183250 CU067_HUMAN 84536 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.854965337 knock down down-regulator 0.010279729 REG00012 LINC01547 Long intergenic non-protein coding RNA 1547 HGNC:15707 ENSG00000183250 CU067_HUMAN 84536 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.751380106 knock down down-regulator 0.018906758 REG00012 DIRC1 Disrupted in renal carcinoma 1 HGNC:15760 ENSG00000174325 DIRC1_HUMAN 116093 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ST7-AS1 ST7 antisense RNA 1 HGNC:16000 ENSG00000227199 . 93653 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ST7-AS1 ST7 antisense RNA 1 HGNC:16000 ENSG00000227199 . 93653 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.841598281 knock down down-regulator 0.001956679 REG00012 BACE2-IT1 BACE2 intronic transcript 1 HGNC:16024 ENSG00000224388 . 282569 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.819551033 knock down down-regulator 1.97E-16 REG00012 BACE2-IT1 BACE2 intronic transcript 1 HGNC:16024 ENSG00000224388 . 282569 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.58428141 knock down down-regulator 2.10E-07 REG00012 ST7-AS2 ST7 antisense RNA 2 HGNC:16044 ENSG00000226367 . 93654 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FAM83C-AS1 FAM83C antisense RNA 1 HGNC:16113 ENSG00000235214 . 140846 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -5.0665755 knock out down-regulator 0.011695136 REG00012 LINC00261 Long intergenic non-protein coding RNA 261 HGNC:16189 ENSG00000259974 . 140828 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DSCR9 Down syndrome critical region 9 HGNC:16301 ENSG00000230366 DSCR9_HUMAN 257203 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GAS5 Growth arrest specific 5 HGNC:16355 ENSG00000234741 . 60674 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 GAS5 Growth arrest specific 5 HGNC:16355 ENSG00000234741 . 60674 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.923214661 knock down up-regulate 2.00E-40 REG00012 LINC00313 Long intergenic non-protein coding RNA 313 HGNC:16416 ENSG00000185186 CU084_HUMAN 114038 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MCM3AP-AS1 MCM3AP antisense RNA 1 HGNC:16417 ENSG00000215424 . 114044 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.753726788 knock down down-regulator 0.014933663 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.178713895 knock down up-regulate 0.013565274 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.111143444 knock down down-regulator 0.013544071 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.689844316 knock down down-regulator 0.000676675 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.721803643 knock down up-regulate 0.031051904 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.745517619 knock down down-regulator 0.036807693 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.968133075 knock down down-regulator 0.037500606 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.688590168 knock down down-regulator 0.032527905 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.596359117 knock down down-regulator 0.00358457 REG00012 LINC00205 Long intergenic non-protein coding RNA 205 HGNC:16420 ENSG00000223768 . 642852 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.860652662 knock down up-regulate 0.032703655 REG00012 BRWD1-AS2 BRWD1 antisense RNA 2 HGNC:16423 ENSG00000255568 BRAS2_HUMAN 103091865 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.269398804 knock down up-regulate 1.93E-08 REG00012 BRWD1-AS2 BRWD1 antisense RNA 2 HGNC:16423 ENSG00000255568 BRAS2_HUMAN 103091865 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.972453101 knock down up-regulate 5.90E-08 REG00012 LINC00334 Long intergenic non-protein coding RNA 334 HGNC:16425 ENSG00000182586 . 114042 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TSPEAR-AS2 TSPEAR antisense RNA 2 HGNC:16428 ENSG00000182912 TSAS2_HUMAN 114043 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TSPEAR-AS2 TSPEAR antisense RNA 2 HGNC:16428 ENSG00000182912 TSAS2_HUMAN 114043 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.410687067 knock down down-regulator 0.000423916 REG00012 TSPEAR-AS2 TSPEAR antisense RNA 2 HGNC:16428 ENSG00000182912 TSAS2_HUMAN 114043 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.339496396 knock down up-regulate 0.003070641 REG00012 GRIK1-AS1 GRIK1 antisense RNA 1 HGNC:16458 ENSG00000174680 . 642976 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.799255002 knock down down-regulator 5.94E-36 REG00012 DSCR8 Down syndrome critical region 8 HGNC:16707 ENSG00000198054 DSCR8_HUMAN 84677 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.792021016 knock out down-regulator 0.010702346 REG00012 C21orf91-OT1 C21orf91 overlapping transcript 1 HGNC:16729 ENSG00000240770 . 246312 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DIAPH2-AS1 DIAPH2 antisense RNA 1 HGNC:16972 ENSG00000236256 EPAG_HUMAN 10824 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DIAPH2-AS1 DIAPH2 antisense RNA 1 HGNC:16972 ENSG00000236256 EPAG_HUMAN 10824 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.782213244 knock out up-regulate 0.002332653 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.465321535 knock down down-regulator 0.018089571 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.486382745 knock down up-regulate 0.00379971 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.701910335 knock down up-regulate 0.010500846 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.769911908 knock down down-regulator 0.00597457 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.720531724 knock down down-regulator 0.006530035 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.593776506 knock down up-regulate 0.001419861 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.031766305 knock down down-regulator 0.000726331 REG00012 TP53TG1 TP53 target 1 HGNC:17026 ENSG00000182165 . 11257 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.261226272 knock down down-regulator 0.000284033 REG00012 PSORS1C3 Psoriasis susceptibility 1 candidate 3 HGNC:17203 ENSG00000204528 . 100130889 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.329508684 knock down down-regulator 0.001891494 REG00012 PSORS1C3 Psoriasis susceptibility 1 candidate 3 HGNC:17203 ENSG00000204528 . 100130889 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.812880245 knock down down-regulator 0.03101054 REG00012 DGCR11 DiGeorge syndrome critical region gene 11 HGNC:17226 ENSG00000273311 . 25786 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DGCR11 DiGeorge syndrome critical region gene 11 HGNC:17226 ENSG00000273311 . 25786 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.104063252 knock down down-regulator 8.30E-10 REG00012 DGCR11 DiGeorge syndrome critical region gene 11 HGNC:17226 ENSG00000273311 . 25786 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.620847249 knock down up-regulate 0.001864499 REG00012 DGCR11 DiGeorge syndrome critical region gene 11 HGNC:17226 ENSG00000273311 . 25786 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.942021273 knock down down-regulator 0.009359214 REG00012 DGCR11 DiGeorge syndrome critical region gene 11 HGNC:17226 ENSG00000273311 . 25786 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 3.110265757 knock down up-regulate 1.54E-37 REG00012 PART1 Prostate androgen-regulated transcript 1 HGNC:17263 ENSG00000152931 . 25859 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PART1 Prostate androgen-regulated transcript 1 HGNC:17263 ENSG00000152931 . 25859 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.601265632 knock down down-regulator 0.000808635 REG00012 PART1 Prostate androgen-regulated transcript 1 HGNC:17263 ENSG00000152931 . 25859 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.517272922 knock down down-regulator 0.000182635 REG00012 DIRC3 Disrupted in renal carcinoma 3 HGNC:17805 ENSG00000231672 . 729582 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SMCR2 Smith-Magenis syndrome chromosome region, candidate 2 HGNC:17914 ENSG00000223979 . 105371564 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.770768408 knock down down-regulator 0.000237006 REG00012 SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 HGNC:17918 ENSG00000226746 SMCR5_HUMAN 140771 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 WT1-AS WT1 antisense RNA HGNC:18135 ENSG00000183242 WIT1_HUMAN 51352 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.809899488 knock down up-regulate 2.07E-05 REG00012 HCG14 HLA complex group 14 HGNC:18323 ENSG00000224157 . 414760 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TTTY14 Testis-specific transcript, Y-linked 14 HGNC:18495 ENSG00000176728 . 83869 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 EMX2OS EMX2 opposite strand/antisense RNA HGNC:18511 ENSG00000229847 . 196047 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TTTY15 Testis-specific transcript, Y-linked 15 HGNC:18567 ENSG00000233864 . 64595 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.70282993 knock down down-regulator 0.037311788 REG00012 TTTY15 Testis-specific transcript, Y-linked 15 HGNC:18567 ENSG00000233864 . 64595 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.971694548 knock down down-regulator 0.022497104 REG00012 LINC00533 Long intergenic non-protein coding RNA 533 HGNC:18690 ENSG00000235570 . 387055 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ST7-OT4 ST7 overlapping transcript 4 HGNC:18835 ENSG00000214188 . 338069 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 C9orf92 Chromosome 9 open reading frame 92 HGNC:19054 ENSG00000205549 CI092_HUMAN 100129385 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC03041 Long intergenic non-protein coding RNA 3041 HGNC:19054 ENSG00000205549 CI092_HUMAN 100129385 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.590547265 knock out up-regulate 0.000205978 REG00012 LINC03041 Long intergenic non-protein coding RNA 3041 HGNC:19054 ENSG00000205549 CI092_HUMAN 100129385 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.976099688 knock down down-regulator 0.000309397 REG00012 LINC03041 Long intergenic non-protein coding RNA 3041 HGNC:19054 ENSG00000205549 CI092_HUMAN 100129385 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.569958113 knock down down-regulator 3.35E-44 REG00012 C6orf48 Small nucleolar RNA host gene 32 HGNC:19078 ENSG00000204387 . 50854 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG32 Small nucleolar RNA host gene 32 HGNC:19078 ENSG00000204387 . 50854 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.627493469 knock down down-regulator 0.010197018 REG00012 SNHG32 Small nucleolar RNA host gene 32 HGNC:19078 ENSG00000204387 . 50854 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.71638043 knock down down-regulator 0.009071135 REG00012 SNHG32 Small nucleolar RNA host gene 32 HGNC:19078 ENSG00000204387 . 50854 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.74601659 knock down down-regulator 0.011237163 REG00012 SNHG32 Small nucleolar RNA host gene 32 HGNC:19078 ENSG00000204387 . 50854 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.753306174 knock down down-regulator 0.008925717 REG00012 SNHG32 Small nucleolar RNA host gene 32 HGNC:19078 ENSG00000204387 . 50854 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.720319007 knock down down-regulator 0.005024722 REG00012 TMEM9B-AS1 TMEM9B antisense RNA 1 HGNC:19230 ENSG00000254860 . 493900 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.212282533 knock down down-regulator 0.002550402 REG00012 TMEM9B-AS1 TMEM9B antisense RNA 1 HGNC:19230 ENSG00000254860 . 493900 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.764973448 knock down up-regulate 0.000790173 REG00012 FAM13A-AS1 FAM13A antisense RNA 1 HGNC:19370 ENSG00000248019 . 285512 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FAM13A-AS1 FAM13A antisense RNA 1 HGNC:19370 ENSG00000248019 . 285512 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.303678015 knock out down-regulator 0.004765887 REG00012 FAM13A-AS1 FAM13A antisense RNA 1 HGNC:19370 ENSG00000248019 . 285512 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.457235261 knock down up-regulate 0.044749642 REG00012 FAM13A-AS1 FAM13A antisense RNA 1 HGNC:19370 ENSG00000248019 . 285512 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.788238233 knock down up-regulate 0.017683253 REG00012 LINC00316 Long intergenic non-protein coding RNA 316 HGNC:19723 ENSG00000237664 . 388830 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.651065333 knock down up-regulate 6.25E-09 REG00012 LINC00316 Long intergenic non-protein coding RNA 316 HGNC:19723 ENSG00000237664 . 388830 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.864637233 knock down down-regulator 4.40E-12 REG00012 LINC00479 Long intergenic non-protein coding RNA 479 HGNC:19727 ENSG00000236384 CU129_HUMAN 150135 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.776999027 knock down down-regulator 2.40E-25 REG00012 LINC00479 Long intergenic non-protein coding RNA 479 HGNC:19727 ENSG00000236384 CU129_HUMAN 150135 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.251128551 knock down up-regulate 0.000474655 REG00012 NOVA1-DT NOVA1 divergent transcript HGNC:19827 ENSG00000257842 . 102725045 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.075050213 knock down up-regulate 0.042493479 REG00012 NOVA1-DT NOVA1 divergent transcript HGNC:19827 ENSG00000257842 . 102725045 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.041674762 knock down up-regulate 0.021724368 REG00012 LINC01551 Long intergenic non-protein coding RNA 1551 HGNC:19828 ENSG00000186960 CN023_HUMAN 387978 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.391117521 knock down down-regulator 0.023539272 REG00012 LINC01551 Long intergenic non-protein coding RNA 1551 HGNC:19828 ENSG00000186960 CN023_HUMAN 387978 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.688614068 knock down up-regulate 0.04649526 REG00012 LINC00519 Long intergenic non-protein coding RNA 519 HGNC:19838 ENSG00000258955 . 161342 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -2.584317198 knock out down-regulator 2.06E-43 REG00012 LINC00519 Long intergenic non-protein coding RNA 519 HGNC:19838 ENSG00000258955 . 161342 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.333409379 knock down up-regulate 1.54E-07 REG00012 LINC00519 Long intergenic non-protein coding RNA 519 HGNC:19838 ENSG00000258955 . 161342 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.638167334 knock down down-regulator 0.00027502 REG00012 KTN1-AS1 KTN1 antisense RNA 1 HGNC:19842 ENSG00000186615 KTAS1_HUMAN 100129075 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PEG13 Paternally expressed 13 HGNC:19969 ENSG00000282164 . 359809 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PEG13 Paternally expressed 13 HGNC:19969 ENSG00000282164 . 359809 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.773276525 knock down up-regulate 0.000691257 REG00012 PEG13 Paternally expressed 13 HGNC:19969 ENSG00000282164 . 359809 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.670806605 knock down up-regulate 0.007495016 REG00012 LINC00239 Long intergenic non-protein coding RNA 239 HGNC:20119 ENSG00000258512 . 145200 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.143527742 knock down down-regulator 0.014244654 REG00012 LINC00239 Long intergenic non-protein coding RNA 239 HGNC:20119 ENSG00000258512 . 145200 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.143527742 knock down down-regulator 0.014244654 REG00012 FRMD6-AS1 FRMD6 antisense RNA 1 HGNC:20129 ENSG00000273888 FMAS1_HUMAN 145438 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.915832947 knock down up-regulate 4.26E-11 REG00012 FRMD6-AS1 FRMD6 antisense RNA 1 HGNC:20129 ENSG00000273888 FMAS1_HUMAN 145438 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 3.639459839 knock down up-regulate 3.44E-12 REG00012 ACTN1-AS1 ACTN1 divergent transcript HGNC:20131 ENSG00000259062 . 161159 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 HCG25 HLA complex group 25 HGNC:20196 ENSG00000232940 . 414765 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NOP14-AS1 NOP14 antisense RNA 1 HGNC:20205 ENSG00000249673 . 317648 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head) HGNC:20279 ENSG00000258655 ARAS1_HUMAN 84837 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.06030114 knock down down-regulator 0.004490742 REG00012 ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head) HGNC:20279 ENSG00000258655 ARAS1_HUMAN 84837 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.757836069 knock down down-regulator 0.027055511 REG00012 DIO3OS DIO3 opposite strand upstream RNA HGNC:20348 ENSG00000258498 . 64150 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.457778319 knock out up-regulate 1.17E-13 REG00012 NBR2 Neighbor of BRCA1 lncRNA 2 HGNC:20691 ENSG00000198496 . 10230 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NBR2 Neighbor of BRCA1 lncRNA 2 HGNC:20691 ENSG00000198496 . 10230 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.921156684 knock down down-regulator 1.12E-06 REG00012 NBR2 Neighbor of BRCA1 lncRNA 2 HGNC:20691 ENSG00000198496 . 10230 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.64704188 knock down down-regulator 1.23E-06 REG00012 NBR2 Neighbor of BRCA1 lncRNA 2 HGNC:20691 ENSG00000198496 . 10230 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.860983752 knock down up-regulate 0.003720915 REG00012 NBR2 Neighbor of BRCA1 lncRNA 2 HGNC:20691 ENSG00000198496 . 10230 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.997495416 knock down up-regulate 0.000730513 REG00012 KIF25-AS1 KIF25 antisense RNA 1 HGNC:20953 ENSG00000229921 KIAS1_HUMAN 100505879 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.702029779 knock down up-regulate 0.000325132 REG00012 KIF25-AS1 KIF25 antisense RNA 1 HGNC:20953 ENSG00000229921 KIAS1_HUMAN 100505879 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.984412604 knock down up-regulate 0.029001359 REG00012 AGPAT4-IT1 AGPAT4 intronic transcript 1 HGNC:20988 ENSG00000279355 AGIT1_HUMAN 79992 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 AGPAT4-IT1 AGPAT4 intronic transcript 1 HGNC:20988 ENSG00000279355 AGIT1_HUMAN 79992 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.1670091 knock down up-regulate 2.74E-06 REG00012 AGPAT4-IT1 AGPAT4 intronic transcript 1 HGNC:20988 ENSG00000279355 AGIT1_HUMAN 79992 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.162084873 knock down up-regulate 0.014590732 REG00012 AGPAT4-IT1 AGPAT4 intronic transcript 1 HGNC:20988 ENSG00000279355 AGIT1_HUMAN 79992 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.827883582 knock down up-regulate 0.000147046 REG00012 SNHG5 Small nucleolar RNA host gene 5 HGNC:21026 ENSG00000203875 . 387066 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG5 Small nucleolar RNA host gene 5 HGNC:21026 ENSG00000203875 . 387066 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.621474421 knock down down-regulator 0.012618638 REG00012 KAAG1 Kidney associated DCDC2 antisense RNA 1 HGNC:21031 ENSG00000146049 KAAG1_HUMAN 353219 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 KAAG1 Kidney associated DCDC2 antisense RNA 1 HGNC:21031 ENSG00000146049 KAAG1_HUMAN 353219 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.773316558 knock out down-regulator 2.31E-15 REG00012 AFDN-AS1 AFDN divergent transcript HGNC:21236 ENSG00000198221 AFDDT_HUMAN 653483 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00242 Long intergenic non-protein coding RNA 242 HGNC:21249 ENSG00000229214 CF122_HUMAN 401288 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00472 Long intergenic non-protein coding RNA 472 HGNC:21380 ENSG00000233237 CF155_HUMAN 79940 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.325957738 knock down down-regulator 5.91E-05 REG00012 LINC00472 Long intergenic non-protein coding RNA 472 HGNC:21380 ENSG00000233237 CF155_HUMAN 79940 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.900252555 knock down down-regulator 1.52E-22 REG00012 LINC00222 Long intergenic non-protein coding RNA 222 HGNC:21560 ENSG00000203801 . 387111 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00574 Long intergenic non-protein coding RNA 574 HGNC:21598 ENSG00000231690 CF208_HUMAN 80069 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 WDFY3-AS2 WDFY3 antisense RNA 2 HGNC:21603 ENSG00000180769 . 404201 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.70660687 knock down down-regulator 1.76E-06 REG00012 FAM66C Family with sequence similarity 66 member C HGNC:21644 ENSG00000226711 . 440078 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.654647034 knock down down-regulator 0.039578325 REG00012 FAM66C Family with sequence similarity 66 member C HGNC:21644 ENSG00000226711 . 440078 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.60255894 knock down up-regulate 0.027401378 REG00012 HCP5 HLA complex P5 HGNC:21659 ENSG00000206337 HCP5_HUMAN 10866 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.95508016 knock down down-regulator 0.000501832 REG00012 HCP5 HLA complex P5 HGNC:21659 ENSG00000206337 HCP5_HUMAN 10866 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.911169955 knock down up-regulate 0.000258546 REG00012 FAM225B Family with sequence similarity 225 member B HGNC:21865 ENSG00000225684 . 100128385 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.592285545 knock down up-regulate 0.030528851 REG00012 POU6F2-AS2 POU6F2 antisense RNA 2 HGNC:21887 ENSG00000233854 . 100689074 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.6355 knock down down-regulator 8.43E-05 REG00012 PKD1L1-AS1 PKD1L1 antisense RNA 1 HGNC:21911 ENSG00000136275 CG069_HUMAN 80099 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.690956825 knock down up-regulate 0.000187485 REG00012 PKD1L1-AS1 PKD1L1 antisense RNA 1 HGNC:21911 ENSG00000136275 CG069_HUMAN 80099 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.719913307 knock out down-regulator 0.019344785 REG00012 PKD1L1-AS1 PKD1L1 antisense RNA 1 HGNC:21911 ENSG00000136275 CG069_HUMAN 80099 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.850872457 knock down down-regulator 3.87E-06 REG00012 PKD1L1-AS1 PKD1L1 antisense RNA 1 HGNC:21911 ENSG00000136275 CG069_HUMAN 80099 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.118668056 knock down up-regulate 6.77E-07 REG00012 PKD1L1-AS1 PKD1L1 antisense RNA 1 HGNC:21911 ENSG00000136275 CG069_HUMAN 80099 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.661518913 knock down down-regulator 0.002271024 REG00012 PKD1L1-AS1 PKD1L1 antisense RNA 1 HGNC:21911 ENSG00000136275 CG069_HUMAN 80099 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.976507819 knock down down-regulator 0.000999565 REG00012 PKD1L1-AS1 PKD1L1 antisense RNA 1 HGNC:21911 ENSG00000136275 CG069_HUMAN 80099 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.566411938 knock down down-regulator 3.43E-06 REG00012 NPSR1-AS1 NPSR1 antisense RNA 1 HGNC:22128 ENSG00000197085 . 404744 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 BCAR4 Breast cancer anti-estrogen resistance 4 HGNC:22170 ENSG00000262117 . 400500 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 C22orf24 YWHAH antisense RNA 1 HGNC:23051 ENSG00000128254 CV024_HUMAN 25775 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 URB1-AS1 URB1 antisense RNA 1 (head to head) HGNC:23128 ENSG00000256073 URAS1_HUMAN 84996 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.063478256 knock down up-regulate 0.004657372 REG00012 URB1-AS1 URB1 antisense RNA 1 (head to head) HGNC:23128 ENSG00000256073 URAS1_HUMAN 84996 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.791582751 knock down up-regulate 0.000271311 REG00012 URB1-AS1 URB1 antisense RNA 1 (head to head) HGNC:23128 ENSG00000256073 URAS1_HUMAN 84996 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.938712578 knock down down-regulator 0.016895708 REG00012 ZNF295-AS1 ZNF295 antisense RNA 1 HGNC:23130 ENSG00000237232 ZNAS1_HUMAN 150142 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 COL18A1-AS1 COL18A1 antisense RNA 1 HGNC:23132 ENSG00000183535 . 378832 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RN7SL2 RNA component of signal recognition particle 7SL2 HGNC:23134 ENSG00000274012 . 378706 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 Metazoa_SRP RNA component of signal recognition particle 7SL3 HGNC:23135 ENSG00000278771 . 378707 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 2.34E+00 . . . REG00012 RN7SL3 RNA component of signal recognition particle 7SL3 HGNC:23135 ENSG00000278771 . 378707 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.912381267 knock down down-regulator 8.24E-05 REG00012 RN7SL3 RNA component of signal recognition particle 7SL3 HGNC:23135 ENSG00000278771 . 378707 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.846019471 knock down up-regulate 0.000388578 REG00012 RN7SL3 RNA component of signal recognition particle 7SL3 HGNC:23135 ENSG00000278771 . 378707 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.667855979 knock down down-regulator 7.42E-05 REG00012 RN7SL3 RNA component of signal recognition particle 7SL3 HGNC:23135 ENSG00000278771 . 378707 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.852842696 knock down up-regulate 0.00845894 REG00012 DHRS4-AS1 DHRS4 antisense RNA 1 HGNC:23175 ENSG00000215256 DHAS1_HUMAN 55449 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ARRDC1-AS1 ARRDC1 antisense RNA 1 HGNC:23395 ENSG00000203993 CI037_HUMAN 85026 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 C10orf25 ZNF22 antisense RNA 1 HGNC:23509 ENSG00000165511 ZFAS1_HUMAN 220979 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 CELF2-AS1 CELF2 antisense RNA 1 HGNC:23515 ENSG00000181800 CEAS1_HUMAN 414196 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01553 Long intergenic non-protein coding RNA 1553 HGNC:23524 ENSG00000235931 CJ040_HUMAN 283025 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ZNF503-AS2 ZNF503 antisense RNA 2 HGNC:23525 ENSG00000237149 ZNAS2_HUMAN 100131213 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MIR17HG MiR-17-92a-1 cluster host gene HGNC:23564 ENSG00000215417 MIRH1_HUMAN 407975 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MIR17HG MiR-17-92a-1 cluster host gene HGNC:23564 ENSG00000215417 MIRH1_HUMAN 407975 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.457598149 knock down down-regulator 0.016004577 REG00012 MIR17HG MiR-17-92a-1 cluster host gene HGNC:23564 ENSG00000215417 MIRH1_HUMAN 407975 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.586614049 knock down down-regulator 0.005109281 REG00012 MIR17HG MiR-17-92a-1 cluster host gene HGNC:23564 ENSG00000215417 MIRH1_HUMAN 407975 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.296241541 knock down down-regulator 0.012814878 REG00012 LINC00475 Long intergenic non-protein coding RNA 475 HGNC:23569 ENSG00000225511 . 158314 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ZNF32-AS1 ZNF32 antisense RNA 1 HGNC:23577 ENSG00000226245 . 414197 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 ZNF32-AS2 ZNF32 antisense RNA 2 HGNC:23593 ENSG00000230565 . 414208 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.476685429 knock down down-regulator 0.034097678 REG00012 MIR600HG MIR600 host gene HGNC:23642 ENSG00000236901 . 81571 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MIR600HG MIR600 host gene HGNC:23642 ENSG00000236901 . 81571 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.576700428 knock out down-regulator 0.024405252 REG00012 MIR600HG MIR600 host gene HGNC:23642 ENSG00000236901 . 81571 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.832628159 knock down down-regulator 0.010931424 REG00012 MIR600HG MIR600 host gene HGNC:23642 ENSG00000236901 . 81571 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.143517026 knock down up-regulate 0.011428174 REG00012 FAM27B Family with sequence similarity 27 member B HGNC:23667 ENSG00000278763 FAM27_HUMAN 100133121 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.718905221 knock down down-regulator 0.003198572 REG00012 FAM27B Family with sequence similarity 27 member B HGNC:23667 ENSG00000278763 FAM27_HUMAN 100133121 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.812455561 knock down down-regulator 0.044755579 REG00012 FAM27C Family with sequence similarity 27 member C HGNC:23668 ENSG00000231527 FAM27_HUMAN 100132948 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.605893352 knock down down-regulator 8.37E-05 REG00012 FAM27C Family with sequence similarity 27 member C HGNC:23668 ENSG00000231527 FAM27_HUMAN 100132948 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.749946695 knock down up-regulate 0.032990734 REG00012 C3orf35 APRG1 tumor suppressor candidate HGNC:24082 ENSG00000198590 APRG1_HUMAN 339883 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MAPKAPK5-AS1 MAPKAPK5 antisense RNA 1 HGNC:24091 ENSG00000234608 MAAS1_HUMAN 51275 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DBH-AS1 DBH antisense RNA 1 HGNC:24155 ENSG00000225756 . 138948 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DBH-AS1 DBH antisense RNA 1 HGNC:24155 ENSG00000225756 . 138948 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.779798391 knock down up-regulate 0.009673398 REG00012 DBH-AS1 DBH antisense RNA 1 HGNC:24155 ENSG00000225756 . 138948 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.604216219 knock down up-regulate 0.005090545 REG00012 DBH-AS1 DBH antisense RNA 1 HGNC:24155 ENSG00000225756 . 138948 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.452739679 knock down up-regulate 0.000783932 REG00012 DBH-AS1 DBH antisense RNA 1 HGNC:24155 ENSG00000225756 . 138948 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.721731041 knock down down-regulator 0.014541544 REG00012 DBH-AS1 DBH antisense RNA 1 HGNC:24155 ENSG00000225756 . 138948 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.20943489 knock down up-regulate 0.02154645 REG00012 DBH-AS1 DBH antisense RNA 1 HGNC:24155 ENSG00000225756 . 138948 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.753049786 knock down up-regulate 0.044336491 REG00012 SND1-IT1 SND1 intronic transcript 1 HGNC:24158 ENSG00000279078 SNIT1_HUMAN 27099 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DKFZP434K028 MYRF antisense RNA 1 HGNC:24506 ENSG00000124915 . 26070 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00202-1 Family with sequence similarity 238 member C HGNC:24672 ENSG00000283709 . 387644 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 FAM238C Family with sequence similarity 238 member C HGNC:24672 ENSG00000283709 . 387644 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.600769183 knock down down-regulator 0.02005189 REG00012 FAM238C Family with sequence similarity 238 member C HGNC:24672 ENSG00000283709 . 387644 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.655951924 knock down down-regulator 0.011665377 REG00012 FAM238C Family with sequence similarity 238 member C HGNC:24672 ENSG00000283709 . 387644 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.244100525 knock down down-regulator 2.15E-06 REG00012 FAM238C Family with sequence similarity 238 member C HGNC:24672 ENSG00000283709 . 387644 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.516994481 knock down down-regulator 0.04162413 REG00012 LINC01554 Long intergenic non-protein coding RNA 1554 HGNC:24687 ENSG00000236882 CE027_HUMAN 202299 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PCAT4 Prostate cancer associated transcript 4 HGNC:24853 ENSG00000251321 . 118425 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ASAP1-IT1 ASAP1 intronic transcript 1 HGNC:24998 . . 29065 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00339 Long intergenic non-protein coding RNA 339 HGNC:25011 ENSG00000218510 . 29092 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.674183452 knock down down-regulator 4.54E-05 REG00012 N4BP2L2-IT2 N4BPL2 intronic transcript 2 HGNC:25038 ENSG00000281026 . 116828 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG11 Small nucleolar RNA host gene 11 HGNC:25046 ENSG00000174365 . 128439 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.141120923 knock down down-regulator 0.004801713 REG00012 SNHG11 Small nucleolar RNA host gene 11 HGNC:25046 ENSG00000174365 . 128439 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.737040237 knock down down-regulator 0.002080975 REG00012 SNHG11 Small nucleolar RNA host gene 11 HGNC:25046 ENSG00000174365 . 128439 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.588672049 knock down down-regulator 0.020844418 REG00012 SNHG11 Small nucleolar RNA host gene 11 HGNC:25046 ENSG00000174365 . 128439 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.891058607 knock down down-regulator 0.00366411 REG00012 C2orf27A Chromosome 2 open reading frame 27A HGNC:25077 ENSG00000287151 CB27A_HUMAN 29798 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SHANK2-AS3 SHANK2 antisense RNA 3 HGNC:25098 ENSG00000171671 SHAS3_HUMAN 220070 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LBX2-AS1 LBX2 antisense RNA 1 HGNC:25136 ENSG00000257702 . 151534 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LBX2-AS1 LBX2 antisense RNA 1 HGNC:25136 ENSG00000257702 . 151534 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.966668395 knock down up-regulate 1.27E-13 REG00012 LBX2-AS1 LBX2 antisense RNA 1 HGNC:25136 ENSG00000257702 . 151534 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.77827097 knock down down-regulator 0.000606678 REG00012 CH17-340M24.3 ATP6AP1 divergent transcript HGNC:25138 ENSG00000197180 . 158960 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ATP6AP1-DT ATP6AP1 divergent transcript HGNC:25138 ENSG00000197180 . 158960 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.301826196 knock down up-regulate 0.011192802 REG00012 ATP6AP1-DT ATP6AP1 divergent transcript HGNC:25138 ENSG00000197180 . 158960 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.453032994 knock down up-regulate 4.19E-30 REG00012 ATP6AP1-DT ATP6AP1 divergent transcript HGNC:25138 ENSG00000197180 . 158960 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.674133677 knock down down-regulator 0.002203633 REG00012 EXOC3-AS1 EXOC3 antisense RNA 1 HGNC:25175 ENSG00000221990 EXAS1_HUMAN 116349 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.866730803 knock down up-regulate 0.0034361 REG00012 EXOC3-AS1 EXOC3 antisense RNA 1 HGNC:25175 ENSG00000221990 EXAS1_HUMAN 116349 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.593575972 knock down down-regulator 0.027131892 REG00012 ZNF582-AS1 ZNF582 divergent transcript HGNC:25213 ENSG00000267454 . 386758 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01963 Long intergenic non-protein coding RNA 1963 HGNC:25283 ENSG00000260804 . 150967 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01963 Long intergenic non-protein coding RNA 1963 HGNC:25283 ENSG00000260804 . 150967 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.816759014 knock down down-regulator 0.002514676 REG00012 LINC01963 Long intergenic non-protein coding RNA 1963 HGNC:25283 ENSG00000260804 . 150967 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.714753789 knock down down-regulator 0.010082219 REG00012 LINC01963 Long intergenic non-protein coding RNA 1963 HGNC:25283 ENSG00000260804 . 150967 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.755941269 knock down down-regulator 0.038255158 REG00012 LINC01963 Long intergenic non-protein coding RNA 1963 HGNC:25283 ENSG00000260804 . 150967 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.590195795 knock down down-regulator 0.046160877 REG00012 LINC01963 Long intergenic non-protein coding RNA 1963 HGNC:25283 ENSG00000260804 . 150967 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.6955631 knock down up-regulate 0.04620454 REG00012 MIR4453HG MIR4453 host gene HGNC:25288 ENSG00000268471 . 54553 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 2.645127411 knock down up-regulate 0.00154226 REG00012 MIR4453HG MIR4453 host gene HGNC:25288 ENSG00000268471 . 54553 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.666692517 knock down down-regulator 0.001326628 REG00012 ASB16-AS1 ASB16 antisense RNA 1 HGNC:25442 ENSG00000267080 ASAS1_HUMAN 339201 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FLJ10038 GABPB1 intronic transcript HGNC:25469 ENSG00000285410 . 55056 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ANP32A-IT1 ANP32A intronic transcript 1 HGNC:25672 . . 80035 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CEBPA-AS1 CEBPA divergent transcript HGNC:25710 ENSG00000267296 . 80054 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 CEBPA-DT CEBPA divergent transcript HGNC:25710 ENSG00000267296 . 80054 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.294772249 knock down down-regulator 0.022592709 REG00012 CEBPA-DT CEBPA divergent transcript HGNC:25710 ENSG00000267296 . 80054 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.294772249 knock down down-regulator 0.022592709 REG00012 KLF3-AS1 KLF3 antisense RNA 1 HGNC:25796 ENSG00000231160 . 79667 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 HEXA-AS1 HEXA antisense RNA 1 HGNC:25810 ENSG00000260339 HEAS1_HUMAN 80072 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ASMTL-AS1 ASMTL antisense RNA 1 HGNC:25811 ENSG00000236017 . 80161 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ASMTL-AS1 ASMTL antisense RNA 1 HGNC:25811 ENSG00000236017 . 80161 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.708309786 knock down down-regulator 0.012550954 REG00012 ASMTL-AS1 ASMTL antisense RNA 1 HGNC:25811 ENSG00000236017 . 80161 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.650640247 knock down down-regulator 2.75E-05 REG00012 ASMTL-AS1 ASMTL antisense RNA 1 HGNC:25811 ENSG00000236017 . 80161 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.871957491 knock down down-regulator 0.02444158 REG00012 LINC01521 Long intergenic non-protein coding RNA 1521 HGNC:26029 ENSG00000213888 . 54944 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.859996868 knock down up-regulate 0.000598234 REG00012 LINC01521 Long intergenic non-protein coding RNA 1521 HGNC:26029 ENSG00000213888 . 54944 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.666366109 knock down down-regulator 0.01809604 REG00012 LINC01521 Long intergenic non-protein coding RNA 1521 HGNC:26029 ENSG00000213888 . 54944 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.943771318 knock down up-regulate 0.021138295 REG00012 LINC01521 Long intergenic non-protein coding RNA 1521 HGNC:26029 ENSG00000213888 . 54944 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.673789695 knock down down-regulator 0.014679944 REG00012 LINC00115 Long intergenic non-protein coding RNA 115 HGNC:26211 ENSG00000225880 . 79854 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -2.512252807 knock down down-regulator 0.045066416 REG00012 LINC00115 Long intergenic non-protein coding RNA 115 HGNC:26211 ENSG00000225880 . 79854 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.206750885 knock down down-regulator 0.00365981 REG00012 TMEM51-AS1 TMEM51 antisense RNA 1 HGNC:26301 ENSG00000175147 . 200197 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TMEM51-AS1 TMEM51 antisense RNA 1 HGNC:26301 ENSG00000175147 . 200197 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.269648471 knock down down-regulator 4.96E-05 REG00012 TMEM51-AS1 TMEM51 antisense RNA 1 HGNC:26301 ENSG00000175147 . 200197 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.634134988 knock down down-regulator 0.002698316 REG00012 LINC01465 Long intergenic non-protein coding RNA 1465 HGNC:26364 ENSG00000221949 CL061_HUMAN 283416 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01465 Long intergenic non-protein coding RNA 1465 HGNC:26364 ENSG00000221949 CL061_HUMAN 283416 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.831003905 knock down up-regulate 0.033667707 REG00012 CRMA Cardiomyocyte maturation associated lncRNA HGNC:26393 ENSG00000174403 . 253868 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.937248636 knock down down-regulator 0.006224998 REG00012 CRMA Cardiomyocyte maturation associated lncRNA HGNC:26393 ENSG00000174403 . 253868 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.793716806 knock down down-regulator 0.000105933 REG00012 CRMA Cardiomyocyte maturation associated lncRNA HGNC:26393 ENSG00000174403 . 253868 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.631831314 knock down up-regulate 0.016370307 REG00012 PSMA3-AS1 PSMA3 antisense RNA 1 HGNC:26445 ENSG00000257621 . 379025 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PSMA3-AS1 PSMA3 antisense RNA 1 HGNC:26445 ENSG00000257621 . 379025 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.62968669 knock down down-regulator 0.046552564 REG00012 PSMA3-AS1 PSMA3 antisense RNA 1 HGNC:26445 ENSG00000257621 . 379025 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.910513809 knock down down-regulator 0.026820617 REG00012 FAM218A Family with sequence similarity 218 member A HGNC:26466 ENSG00000250486 F218A_HUMAN 152756 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SATB2-AS1 SATB2 antisense RNA 1 HGNC:26490 ENSG00000225953 . 150538 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.779364403 knock down up-regulate 0.00046312 REG00012 SATB2-AS1 SATB2 antisense RNA 1 HGNC:26490 ENSG00000225953 . 150538 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.726398727 knock down down-regulator 0.000632325 REG00012 SATB2-AS1 SATB2 antisense RNA 1 HGNC:26490 ENSG00000225953 . 150538 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.768074536 knock down up-regulate 0.0009133 REG00012 SSTR5-AS1 SSTR5 antisense RNA 1 HGNC:26502 ENSG00000261713 . 146336 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SSTR5-AS1 SSTR5 antisense RNA 1 HGNC:26502 ENSG00000261713 . 146336 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.10213642 knock down down-regulator 0.042023281 REG00012 SSTR5-AS1 SSTR5 antisense RNA 1 HGNC:26502 ENSG00000261713 . 146336 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.616136921 knock down down-regulator 0.005850856 REG00012 EWSAT1 Ewing sarcoma associated transcript 1 HGNC:26596 ENSG00000212766 . 283673 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.214949736 knock down up-regulate 0.02609733 REG00012 LINC02910 Long intergenic non-protein coding RNA 2910 HGNC:26601 ENSG00000176659 CT197_HUMAN 284756 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 3.814937634 knock down up-regulate 1.18E-37 REG00012 LINC02910 Long intergenic non-protein coding RNA 2910 HGNC:26601 ENSG00000176659 CT197_HUMAN 284756 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.842495777 knock down up-regulate 4.15E-06 REG00012 BASP1-AS1 BASP1 antisense RNA 1 HGNC:26609 ENSG00000215196 . 285696 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.466410964 knock down up-regulate 3.98E-98 REG00012 BASP1-AS1 BASP1 antisense RNA 1 HGNC:26609 ENSG00000215196 . 285696 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.302316296 knock down down-regulator 6.09E-28 REG00012 LINC00324 Long intergenic non-protein coding RNA 324 HGNC:26628 ENSG00000178977 . 284029 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00324 Long intergenic non-protein coding RNA 324 HGNC:26628 ENSG00000178977 . 284029 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.683709015 knock down up-regulate 1.31E-17 REG00012 LINC00324 Long intergenic non-protein coding RNA 324 HGNC:26628 ENSG00000178977 . 284029 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.645804303 knock down up-regulate 0.000517743 REG00012 LINC00324 Long intergenic non-protein coding RNA 324 HGNC:26628 ENSG00000178977 . 284029 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.148245252 knock down down-regulator 2.46E-17 REG00012 LINC00324 Long intergenic non-protein coding RNA 324 HGNC:26628 ENSG00000178977 . 284029 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.977987452 knock down down-regulator 7.45E-11 REG00012 LINC01555 Long intergenic non-protein coding RNA 1555 HGNC:26647 ENSG00000180869 CA180_HUMAN 439927 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MORC2-AS1 MORC2 antisense RNA 1 HGNC:26662 ENSG00000235989 . 150291 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RUSC1-AS1 RUSC1 antisense RNA 1 HGNC:26680 ENSG00000225855 RUAS1_HUMAN 284618 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 2.003478047 knock down up-regulate 3.05E-05 REG00012 RUSC1-AS1 RUSC1 antisense RNA 1 HGNC:26680 ENSG00000225855 RUAS1_HUMAN 284618 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.114905644 knock down up-regulate 0.031491511 REG00012 RUSC1-AS1 RUSC1 antisense RNA 1 HGNC:26680 ENSG00000225855 RUAS1_HUMAN 284618 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.985644618 knock down up-regulate 0.003246535 REG00012 LINC00304 Long intergenic non-protein coding RNA 304 HGNC:26713 ENSG00000180422 CP081_HUMAN 283860 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02904 Long intergenic non-protein coding RNA 2904 HGNC:26731 ENSG00000177335 . 286122 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.968435592 knock down down-regulator 4.41E-09 REG00012 LINC02904 Long intergenic non-protein coding RNA 2904 HGNC:26731 ENSG00000177335 . 286122 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.052502003 knock down up-regulate 5.22E-17 REG00012 LINC02904 Long intergenic non-protein coding RNA 2904 HGNC:26731 ENSG00000177335 . 286122 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.948322603 knock down up-regulate 2.99E-05 REG00012 SAP30L-AS1 SAP30L antisense RNA 1 (head to head) HGNC:26760 ENSG00000245275 . 386627 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SAP30L-AS1 SAP30L antisense RNA 1 (head to head) HGNC:26760 ENSG00000245275 . 386627 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.62892064 knock down down-regulator 0.007417334 REG00012 LINC01106 Long intergenic non-protein coding RNA 1106 HGNC:26769 ENSG00000175772 . 151009 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.781053384 knock down up-regulate 0.049982445 REG00012 LINC01106 Long intergenic non-protein coding RNA 1106 HGNC:26769 ENSG00000175772 . 151009 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.328383131 knock down up-regulate 0.011739858 REG00012 HNF1A-AS1 HNF1A antisense RNA 1 HGNC:26785 ENSG00000241388 . 283460 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HNF1A-AS1 HNF1A antisense RNA 1 HGNC:26785 ENSG00000241388 . 283460 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.840954295 knock down down-regulator 0.00101953 REG00012 HNF1A-AS1 HNF1A antisense RNA 1 HGNC:26785 ENSG00000241388 . 283460 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.765863311 knock out down-regulator 0.020971924 REG00012 HNF1A-AS1 HNF1A antisense RNA 1 HGNC:26785 ENSG00000241388 . 283460 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.781944826 knock down down-regulator 0.002119931 REG00012 HNF1A-AS1 HNF1A antisense RNA 1 HGNC:26785 ENSG00000241388 . 283460 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.845654299 knock down down-regulator 0.000491168 REG00012 HNF1A-AS1 HNF1A antisense RNA 1 HGNC:26785 ENSG00000241388 . 283460 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.611727369 knock down down-regulator 0.046341112 REG00012 HNF1A-AS1 HNF1A antisense RNA 1 HGNC:26785 ENSG00000241388 . 283460 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.811424907 knock down down-regulator 0.000203089 REG00012 LINC02873 Long intergenic non-protein coding RNA 2873 HGNC:26805 ENSG00000175728 . 283171 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.720546161 knock down down-regulator 1.69E-05 REG00012 LINC02873 Long intergenic non-protein coding RNA 2873 HGNC:26805 ENSG00000175728 . 283171 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.911774381 knock down down-regulator 7.65E-06 REG00012 LINC00921 Long intergenic non-protein coding RNA 921 HGNC:26830 ENSG00000281005 . 283876 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.210487405 knock down up-regulate 2.65E-05 REG00012 LINC00921 Long intergenic non-protein coding RNA 921 HGNC:26830 ENSG00000281005 . 283876 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.908877323 knock down up-regulate 0.01188397 REG00012 TAPT1-AS1 TAPT1 antisense RNA 1 (head to head) HGNC:26832 ENSG00000263327 . 202020 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.858467852 knock down up-regulate 0.007437518 REG00012 TAPT1-AS1 TAPT1 antisense RNA 1 (head to head) HGNC:26832 ENSG00000263327 . 202020 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.96801501 knock down down-regulator 0.043136641 REG00012 LINC00528 Long intergenic non-protein coding RNA 528 HGNC:26875 ENSG00000269220 CV037_HUMAN 200298 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC-PINT Long intergenic non-protein coding RNA, p53 induced transcript HGNC:26885 ENSG00000231721 PNT87_HUMAN 378805 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC-PINT Long intergenic non-protein coding RNA, p53 induced transcript HGNC:26885 ENSG00000231721 PNT87_HUMAN 378805 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.187170983 knock down up-regulate 1.98E-05 REG00012 LINC-PINT Long intergenic non-protein coding RNA, p53 induced transcript HGNC:26885 ENSG00000231721 PNT87_HUMAN 378805 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.081252768 knock down up-regulate 0.001186786 REG00012 TNFRSF14-AS1 TNFRSF14 antisense RNA 1 HGNC:26966 ENSG00000238164 . 115110 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.998144947 knock down up-regulate 0.000213248 REG00012 TNFRSF14-AS1 TNFRSF14 antisense RNA 1 HGNC:26966 ENSG00000238164 . 115110 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.499306688 knock down down-regulator 0.000229764 REG00012 NRAD1 Non-coding RNA in the aldehyde dehydrogenase 1A pathway HGNC:26981 ENSG00000233725 . 121838 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.698889183 knock down up-regulate 0.010074812 REG00012 NRAD1 Non-coding RNA in the aldehyde dehydrogenase 1A pathway HGNC:26981 ENSG00000233725 . 121838 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.163163702 knock down down-regulator 1.74E-05 REG00012 SOCS2-AS1 SOCS2 antisense RNA 1 HGNC:27054 ENSG00000246985 . 144481 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.697278499 knock down down-regulator 0.034265339 REG00012 SOCS2-AS1 SOCS2 antisense RNA 1 HGNC:27054 ENSG00000246985 . 144481 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.683322449 knock down down-regulator 0.017154923 REG00012 A2M-AS1 A2M antisense RNA 1 HGNC:27057 ENSG00000245105 . 144571 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00637 PPP1R13B divergent transcript HGNC:27069 ENSG00000258735 . 145216 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC145694 KIF23 and PAQR5 antisense RNA 1 HGNC:27075 ENSG00000259426 . 145694 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 KIF23-AS1 KIF23 and PAQR5 antisense RNA 1 HGNC:27075 ENSG00000259426 . 145694 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.321448934 knock down up-regulate 7.38E-20 REG00012 LINC00924 Long intergenic non-protein coding RNA 924 HGNC:27081 ENSG00000259134 . 145820 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02003 Long intergenic non-protein coding RNA 2003 HGNC:27099 ENSG00000264026 . 146795 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ILF3-AS1 ILF3 divergent transcript HGNC:27115 ENSG00000267100 . 147727 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00662 Long intergenic non-protein coding RNA 662 HGNC:27122 ENSG00000261824 . 148189 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00662 Long intergenic non-protein coding RNA 662 HGNC:27122 ENSG00000261824 . 148189 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.10485788 knock down up-regulate 2.25E-27 REG00012 LINC00662 Long intergenic non-protein coding RNA 662 HGNC:27122 ENSG00000261824 . 148189 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.482845824 knock down down-regulator 4.44E-76 REG00012 LOC148413 MRPL20 antisense RNA 1 HGNC:27125 ENSG00000224870 . 148413 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02609 Long intergenic non-protein coding RNA 2609 HGNC:27140 ENSG00000233593 . 105378853 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.164752519 knock out down-regulator 0.002053546 REG00012 GTSE1-AS1 GTSE1 divergent transcript HGNC:27163 ENSG00000277232 . 150384 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02610 Long intergenic non-protein coding RNA 2610 HGNC:27177 ENSG00000186235 . 151174 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.83583746 knock down down-regulator 0.006583085 REG00012 LINC02610 Long intergenic non-protein coding RNA 2610 HGNC:27177 ENSG00000186235 . 151174 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.83583746 knock down down-regulator 0.006583085 REG00012 LINC00635 Long intergenic non-protein coding RNA 635 HGNC:27184 ENSG00000241469 . 151658 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01085 Long intergenic non-protein coding RNA 1085 HGNC:27198 ENSG00000248698 . 152742 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.937754202 knock out down-regulator 0.023302802 REG00012 LOC153684 ANXA2R antisense RNA 1 HGNC:27208 ENSG00000215068 . 153684 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00599 MIR124-1 host gene HGNC:27231 ENSG00000253230 . 157627 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 USP27X-DT USP27X divergent transcript HGNC:27249 ENSG00000234390 . 158572 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -3.473888577 knock down down-regulator 5.62E-06 REG00012 USP27X-DT USP27X divergent transcript HGNC:27249 ENSG00000234390 . 158572 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.709926657 knock down down-regulator 0.004355665 REG00012 LINC02870 Long intergenic non-protein coding RNA 2870 HGNC:27275 ENSG00000180066 . 170393 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.221565412 knock down down-regulator 1.99E-14 REG00012 LINC02870 Long intergenic non-protein coding RNA 2870 HGNC:27275 ENSG00000180066 . 170393 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.327393733 knock down up-regulate 1.87E-71 REG00012 LINC00858 Long intergenic non-protein coding RNA 858 HGNC:27276 ENSG00000229404 . 170425 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.167041112 knock down down-regulator 0.034549255 REG00012 LINC00858 Long intergenic non-protein coding RNA 858 HGNC:27276 ENSG00000229404 . 170425 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.1307589 knock down up-regulate 5.18E-08 REG00012 LINC00858 Long intergenic non-protein coding RNA 858 HGNC:27276 ENSG00000229404 . 170425 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -2.891508528 knock down down-regulator 2.12E-11 REG00012 LINC00858 Long intergenic non-protein coding RNA 858 HGNC:27276 ENSG00000229404 . 170425 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.879167007 knock down down-regulator 0.016862597 REG00012 LINC00870 Long intergenic non-protein coding RNA 870 HGNC:27319 ENSG00000243083 . 201617 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.95203188 knock down up-regulate 0.011926192 REG00012 LINC00870 Long intergenic non-protein coding RNA 870 HGNC:27319 ENSG00000243083 . 201617 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.74246122 knock down up-regulate 0.006691499 REG00012 PAXIP1-DT PAXIP1 divergent transcript HGNC:27328 ENSG00000273344 . 202781 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.617489399 knock down down-regulator 6.74E-05 REG00012 LINC01546 Long intergenic non-protein coding RNA 1546 HGNC:27336 ENSG00000228459 CX028_HUMAN 100129464 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.776345842 knock down down-regulator 0.031590658 REG00012 LINC01546 Long intergenic non-protein coding RNA 1546 HGNC:27336 ENSG00000228459 CX028_HUMAN 100129464 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -2.001171658 knock down down-regulator 0.035166031 REG00012 LINC01546 Long intergenic non-protein coding RNA 1546 HGNC:27336 ENSG00000228459 CX028_HUMAN 100129464 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.824464908 knock down up-regulate 0.029518572 REG00012 LINC01546 Long intergenic non-protein coding RNA 1546 HGNC:27336 ENSG00000228459 CX028_HUMAN 100129464 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.830611322 knock down up-regulate 0.015675533 REG00012 PROSER2-AS1 PROSER2 antisense RNA 1 HGNC:27343 ENSG00000225778 . 219731 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 WAC-AS1 WAC antisense RNA 1 (head to head) HGNC:27347 ENSG00000254635 . 220906 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NIFK-AS1 NIFK antisense RNA 1 HGNC:27385 ENSG00000236859 . 254128 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NIFK-AS1 NIFK antisense RNA 1 HGNC:27385 ENSG00000236859 . 254128 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.736539538 knock down up-regulate 0.045093983 REG00012 NIFK-AS1 NIFK antisense RNA 1 HGNC:27385 ENSG00000236859 . 254128 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.713758216 knock down down-regulator 2.27E-05 REG00012 MIR9-3HG MIR9-3 host gene HGNC:27388 ENSG00000255571 . 254559 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01619 Long intergenic non-protein coding RNA 1619 HGNC:27409 ENSG00000257242 CL079_HUMAN 256021 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MOCS2-DT MOCS2 divergent transcript HGNC:27417 ENSG00000247796 . 257396 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.938718914 knock down down-regulator 0.025168077 REG00012 MOCS2-DT MOCS2 divergent transcript HGNC:27417 ENSG00000247796 . 257396 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.944072701 knock down up-regulate 0.03927612 REG00012 MOCS2-DT MOCS2 divergent transcript HGNC:27417 ENSG00000247796 . 257396 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.944072701 knock down up-regulate 0.03927612 REG00012 PDCD4-AS1 PDCD4 antisense RNA 1 HGNC:27425 ENSG00000203497 . 282997 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.180038255 knock down up-regulate 0.000560081 REG00012 PDCD4-AS1 PDCD4 antisense RNA 1 HGNC:27425 ENSG00000203497 . 282997 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.671369109 knock down down-regulator 0.001165709 REG00012 PDCD4-AS1 PDCD4 antisense RNA 1 HGNC:27425 ENSG00000203497 . 282997 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.680774516 knock down up-regulate 0.000500482 REG00012 PDCD4-AS1 PDCD4 antisense RNA 1 HGNC:27425 ENSG00000203497 . 282997 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.990011931 knock down up-regulate 0.000715283 REG00012 ZMIZ1-AS1 ZMIZ1 antisense RNA 1 HGNC:27433 ENSG00000224596 . 283050 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.142162077 knock out down-regulator 0.033839346 REG00012 WDR11-AS1 WDR11 divergent transcript HGNC:27437 ENSG00000227165 . 283089 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SBF2-AS1 SBF2 antisense RNA 1 HGNC:27438 ENSG00000246273 . 283104 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SBF2-AS1 SBF2 antisense RNA 1 HGNC:27438 ENSG00000246273 . 283104 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.921306718 knock down up-regulate 0.033210041 REG00012 SBF2-AS1 SBF2 antisense RNA 1 HGNC:27438 ENSG00000246273 . 283104 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.607649719 knock down down-regulator 0.018058117 REG00012 LINC02762 Long intergenic non-protein coding RNA 2762 HGNC:27443 ENSG00000250303 . 283140 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.70124625 knock down down-regulator 2.34E-65 REG00012 LINC02762 Long intergenic non-protein coding RNA 2762 HGNC:27443 ENSG00000250303 . 283140 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.591516337 knock down up-regulate 6.26E-112 REG00012 LINC02762 Long intergenic non-protein coding RNA 2762 HGNC:27443 ENSG00000250303 . 283140 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.753251185 knock down down-regulator 2.45E-06 REG00012 LOC283177 B3GAT1 divergent transcript HGNC:27449 ENSG00000255545 . 283177 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00294 Long intergenic non-protein coding RNA 294 HGNC:27456 ENSG00000280798 . 283267 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00294 Long intergenic non-protein coding RNA 294 HGNC:27456 ENSG00000280798 . 283267 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.730255207 knock out up-regulate 0.001814255 REG00012 LINC00294 Long intergenic non-protein coding RNA 294 HGNC:27456 ENSG00000280798 . 283267 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.014926103 knock down down-regulator 1.10E-05 REG00012 LINC00294 Long intergenic non-protein coding RNA 294 HGNC:27456 ENSG00000280798 . 283267 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.349118706 knock down up-regulate 1.07E-13 REG00012 LINC00294 Long intergenic non-protein coding RNA 294 HGNC:27456 ENSG00000280798 . 283267 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.438038292 knock down up-regulate 7.06E-06 REG00012 LINC00294 Long intergenic non-protein coding RNA 294 HGNC:27456 ENSG00000280798 . 283267 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.801888577 knock down down-regulator 3.80E-27 REG00012 LINC00294 Long intergenic non-protein coding RNA 294 HGNC:27456 ENSG00000280798 . 283267 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.049589496 knock down up-regulate 1.06E-06 REG00012 C1RL-AS1 C1RL antisense RNA 1 HGNC:27461 ENSG00000205885 . 283314 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC283335 TNS2 antisense RNA 1 HGNC:27464 ENSG00000257337 . 283335 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TNS2-AS1 TNS2 antisense RNA 1 HGNC:27464 ENSG00000257337 . 283335 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.93734623 knock down down-regulator 0.040416013 REG00012 TNS2-AS1 TNS2 antisense RNA 1 HGNC:27464 ENSG00000257337 . 283335 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.700900063 knock down down-regulator 0.001845262 REG00012 LINC00485 Long intergenic non-protein coding RNA 485 HGNC:27476 ENSG00000258169 . 283432 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00346 P53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript HGNC:27492 ENSG00000255874 . 283487 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PRECSIT P53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript HGNC:27492 ENSG00000255874 . 283487 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.293572318 knock down up-regulate 0.007823683 REG00012 PRECSIT P53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript HGNC:27492 ENSG00000255874 . 283487 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.7635091 knock down up-regulate 0.002445772 REG00012 PRECSIT P53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript HGNC:27492 ENSG00000255874 . 283487 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.081280714 knock down up-regulate 0.00589337 REG00012 LINC00639 Long intergenic non-protein coding RNA 639 HGNC:27502 ENSG00000259070 . 283547 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.170161503 knock down up-regulate 0.005326276 REG00012 LINC00641 Long intergenic non-protein coding RNA 641 HGNC:27511 ENSG00000258441 . 283624 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00641 Long intergenic non-protein coding RNA 641 HGNC:27511 ENSG00000258441 . 283624 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.819411437 knock down down-regulator 0.035549485 REG00012 LINC00641 Long intergenic non-protein coding RNA 641 HGNC:27511 ENSG00000258441 . 283624 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -4.198335165 knock down down-regulator 3.18E-21 REG00012 LINC00641 Long intergenic non-protein coding RNA 641 HGNC:27511 ENSG00000258441 . 283624 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.000224937 knock down down-regulator 1.79E-25 REG00012 LINC00641 Long intergenic non-protein coding RNA 641 HGNC:27511 ENSG00000258441 . 283624 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.678566194 knock down up-regulate 0.00049075 REG00012 LINC00926 Long intergenic non-protein coding RNA 926 HGNC:27514 ENSG00000247982 . 283663 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ST20-AS1 ST20 antisense RNA 1 HGNC:27521 ENSG00000259642 STAS1_HUMAN 283687 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 GNAO1-DT GNAO1 divergent transcript HGNC:27543 ENSG00000246379 . 283856 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.596512166 knock down up-regulate 0.01008226 REG00012 IL21R-AS1 IL21R antisense RNA 1 HGNC:27551 ENSG00000259954 . 283888 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 FBXL19-AS1 FBXL19 antisense RNA 1 HGNC:27557 ENSG00000260852 FBAS1_HUMAN 283932 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FBXL19-AS1 FBXL19 antisense RNA 1 HGNC:27557 ENSG00000260852 FBAS1_HUMAN 283932 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.256631615 knock down up-regulate 0.048554519 REG00012 LINC00685 Long intergenic non-protein coding RNA 685 HGNC:27560 ENSG00000226179 . 283981 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00685 Long intergenic non-protein coding RNA 685 HGNC:27560 ENSG00000226179 . 283981 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.107750819 knock down down-regulator 0.000654669 REG00012 LINC00685 Long intergenic non-protein coding RNA 685 HGNC:27560 ENSG00000226179 . 283981 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.050178778 knock down up-regulate 3.55E-19 REG00012 ZNF790-AS1 ZNF790 antisense RNA 1 HGNC:27617 ENSG00000267254 . 284408 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.545598967 knock down down-regulator 0.02205878 REG00012 ZNF790-AS1 ZNF790 antisense RNA 1 HGNC:27617 ENSG00000267254 . 284408 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.903405246 knock down down-regulator 0.000811732 REG00012 ZNF790-AS1 ZNF790 antisense RNA 1 HGNC:27617 ENSG00000267254 . 284408 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.19553833 knock down down-regulator 0.012553495 REG00012 LOC284454 MiR-23a/27a/24-2 cluster host gene HGNC:27620 ENSG00000267519 . 284454 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MIR23AHG MiR-23a/27a/24-2 cluster host gene HGNC:27620 ENSG00000267519 . 284454 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.367820318 knock down down-regulator 0.003554939 REG00012 MIR23AHG MiR-23a/27a/24-2 cluster host gene HGNC:27620 ENSG00000267519 . 284454 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.589118292 knock down down-regulator 0.001187987 REG00012 MIR23AHG MiR-23a/27a/24-2 cluster host gene HGNC:27620 ENSG00000267519 . 284454 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.631147902 knock down down-regulator 0.038940804 REG00012 SNHG28 Small nucleolar RNA host gene 28 HGNC:27647 ENSG00000188004 SNH28_HUMAN 284677 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.71760451 knock down down-regulator 0.018370915 REG00012 SNHG28 Small nucleolar RNA host gene 28 HGNC:27647 ENSG00000188004 SNH28_HUMAN 284677 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.794619571 knock down down-regulator 0.012946739 REG00012 LINC00494 Long intergenic non-protein coding RNA 494 HGNC:27657 ENSG00000235621 . 284749 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.214669377 knock down down-regulator 0.040526432 REG00012 LINC00494 Long intergenic non-protein coding RNA 494 HGNC:27657 ENSG00000235621 . 284749 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.039647769 knock down up-regulate 1.48E-26 REG00012 MIF-AS1 MIF antisense RNA 1 HGNC:27669 ENSG00000218537 . 284889 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 F11-AS1 F11 antisense RNA 1 HGNC:27725 ENSG00000251165 . 285441 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 4.180627975 knock down up-regulate 0.036310368 REG00012 F11-AS1 F11 antisense RNA 1 HGNC:27725 ENSG00000251165 . 285441 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.713728415 knock down down-regulator 0.021346304 REG00012 LINC01096 Long intergenic non-protein coding RNA 1096 HGNC:27739 ENSG00000246095 . 285548 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00174 Long intergenic non-protein coding RNA 174 HGNC:27788 ENSG00000179406 . 285908 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SNHG15 Small nucleolar RNA host gene 15 HGNC:27797 ENSG00000232956 . 285958 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.57E+00 . . . REG00012 EPHA1-AS1 EPHA1 antisense RNA 1 HGNC:27799 ENSG00000229153 . 285965 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SLC25A25-AS1 SLC25A25 antisense RNA 1 HGNC:27844 ENSG00000234771 . 100289019 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLC25A25-AS1 SLC25A25 antisense RNA 1 HGNC:27844 ENSG00000234771 . 100289019 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.729487969 knock down up-regulate 0.001164155 REG00012 FAM225A Family with sequence similarity 225 member A HGNC:27855 ENSG00000231528 . 286333 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.817940785 knock down down-regulator 0.007819349 REG00012 FAM225A Family with sequence similarity 225 member A HGNC:27855 ENSG00000231528 . 286333 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.221454265 knock down down-regulator 0.016104423 REG00012 FAM225A Family with sequence similarity 225 member A HGNC:27855 ENSG00000231528 . 286333 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.636072499 knock down up-regulate 0.033766803 REG00012 LINC00476 ERCC6L2 antisense RNA 1 HGNC:27858 ENSG00000175611 CI130_HUMAN 100128782 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ERCC6L2-AS1 ERCC6L2 antisense RNA 1 HGNC:27858 ENSG00000175611 CI130_HUMAN 100128782 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.668399525 knock down up-regulate 0.020017134 REG00012 ERCC6L2-AS1 ERCC6L2 antisense RNA 1 HGNC:27858 ENSG00000175611 CI130_HUMAN 100128782 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.636271323 knock down up-regulate 0.02009566 REG00012 ERCC6L2-AS1 ERCC6L2 antisense RNA 1 HGNC:27858 ENSG00000175611 CI130_HUMAN 100128782 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.91893148 knock down down-regulator 0.001481132 REG00012 ERCC6L2-AS1 ERCC6L2 antisense RNA 1 HGNC:27858 ENSG00000175611 CI130_HUMAN 100128782 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.089469776 knock down up-regulate 0.00303763 REG00012 LINC00484 Long intergenic non-protein coding RNA 484 HGNC:27862 ENSG00000235641 . 100129347 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ATP2B1-AS1 ATP2B1 antisense RNA 1 HGNC:27883 ENSG00000271614 . 338758 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01089 Long intergenic non-protein coding RNA 1089 HGNC:27886 ENSG00000212694 . 338799 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 C17orf51 Long intergenic non-protein coding RNA 2693 HGNC:27904 ENSG00000212719 CQ051_HUMAN 339263 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00667 Long intergenic non-protein coding RNA 667 HGNC:27906 ENSG00000263753 . 339290 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00667 Long intergenic non-protein coding RNA 667 HGNC:27906 ENSG00000263753 . 339290 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.125964561 knock down up-regulate 3.92E-08 REG00012 LINC00667 Long intergenic non-protein coding RNA 667 HGNC:27906 ENSG00000263753 . 339290 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.653085921 knock down down-regulator 8.50E-74 REG00012 LINC01140 Long intergenic non-protein coding RNA 1140 HGNC:27922 ENSG00000267272 . 339524 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC339807 long intergenic non-protein coding RNA 2579 HGNC:27942 ENSG00000233694 . 339807 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00880 Long intergenic non-protein coding RNA 880 HGNC:27948 ENSG00000243629 . 339894 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.214150741 knock down down-regulator 5.06E-05 REG00012 LINC00880 Long intergenic non-protein coding RNA 880 HGNC:27948 ENSG00000243629 . 339894 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.490642747 knock down down-regulator 3.17E-08 REG00012 LPP-AS2 LPP antisense RNA 2 HGNC:27952 ENSG00000270959 . 339929 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 H1FX-AS1 H1-10 antisense RNA 1 HGNC:27953 ENSG00000206417 H1AS1_HUMAN 339942 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 H1-10-AS1 H1-10 antisense RNA 1 HGNC:27953 ENSG00000206417 H1AS1_HUMAN 339942 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.389430291 knock down up-regulate 0.0391059 REG00012 LOC340017 long intergenic non-protein coding RNA 2433 HGNC:27959 ENSG00000234111 . 340017 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PRR7-AS1 PRR7 antisense RNA 1 HGNC:27961 ENSG00000246334 . 340037 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PRR7-AS1 PRR7 antisense RNA 1 HGNC:27961 ENSG00000246334 . 340037 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.225739548 knock down down-regulator 0.000632231 REG00012 PRR7-AS1 PRR7 antisense RNA 1 HGNC:27961 ENSG00000246334 . 340037 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.876943182 knock down down-regulator 0.000604554 REG00012 PRR7-AS1 PRR7 antisense RNA 1 HGNC:27961 ENSG00000246334 . 340037 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.065537074 knock down down-regulator 0.002550998 REG00012 PRR7-AS1 PRR7 antisense RNA 1 HGNC:27961 ENSG00000246334 . 340037 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.822705391 knock down down-regulator 0.017452171 REG00012 LINC00265 Long intergenic non-protein coding RNA 265 HGNC:28019 ENSG00000188185 . 349114 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 OLMALINC Oligodendrocyte maturation-associated long intergenic non-coding RNA HGNC:28060 ENSG00000235823 . 90271 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 OLMALINC Oligodendrocyte maturation-associated long intergenic non-coding RNA HGNC:28060 ENSG00000235823 . 90271 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.016713059 knock down down-regulator 0.002895427 REG00012 OLMALINC Oligodendrocyte maturation-associated long intergenic non-coding RNA HGNC:28060 ENSG00000235823 . 90271 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.911943573 knock down down-regulator 0.007620274 REG00012 TENM3-AS1 TENM3 antisense RNA 1 HGNC:28076 ENSG00000177822 . 90768 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.858966897 knock out up-regulate 0.008416149 REG00012 TENM3-AS1 TENM3 antisense RNA 1 HGNC:28076 ENSG00000177822 . 90768 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.704705654 knock down up-regulate 0.01050085 REG00012 TENM3-AS1 TENM3 antisense RNA 1 HGNC:28076 ENSG00000177822 . 90768 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.748303908 knock down up-regulate 0.000940741 REG00012 NEK2-DT NEK2 divergent transcript HGNC:28085 ENSG00000231057 . 91548 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.652759449 knock down down-regulator 0.002091068 REG00012 NEK2-DT NEK2 divergent transcript HGNC:28085 ENSG00000231057 . 91548 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.081013523 knock down down-regulator 0.000500979 REG00012 GCC2-AS1 GCC2 antisense RNA 1 HGNC:28126 ENSG00000214184 . 644903 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GCC2-AS1 GCC2 antisense RNA 1 HGNC:28126 ENSG00000214184 . 644903 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.089385011 knock down up-regulate 2.17E-05 REG00012 GCC2-AS1 GCC2 antisense RNA 1 HGNC:28126 ENSG00000214184 . 644903 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.374117323 knock down down-regulator 5.81E-22 REG00012 AFAP1-AS1 AFAP1 antisense RNA 1 HGNC:28141 ENSG00000272620 . 84740 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 5.114636732 knock down up-regulate 0.013756666 REG00012 AFAP1-AS1 AFAP1 antisense RNA 1 HGNC:28141 ENSG00000272620 . 84740 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 5.445591601 knock down up-regulate 5.63E-06 REG00012 DLGAP1-AS2 DLGAP1 antisense RNA 2 HGNC:28146 ENSG00000262001 . 84777 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DLGAP1-AS2 DLGAP1 antisense RNA 2 HGNC:28146 ENSG00000262001 . 84777 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.693244085 knock out up-regulate 0.034379653 REG00012 DLGAP1-AS2 DLGAP1 antisense RNA 2 HGNC:28146 ENSG00000262001 . 84777 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.674242652 knock down down-regulator 0.002239561 REG00012 DLGAP1-AS2 DLGAP1 antisense RNA 2 HGNC:28146 ENSG00000262001 . 84777 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.030631507 knock down down-regulator 0.002425121 REG00012 DLGAP1-AS2 DLGAP1 antisense RNA 2 HGNC:28146 ENSG00000262001 . 84777 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.616191325 knock down up-regulate 0.005038205 REG00012 DLGAP1-AS2 DLGAP1 antisense RNA 2 HGNC:28146 ENSG00000262001 . 84777 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.645456068 knock down up-regulate 0.016842564 REG00012 JMJD1C-AS1 JMJD1C antisense RNA 1 HGNC:28222 ENSG00000272767 . 84989 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.837439824 knock down up-regulate 6.33E-05 REG00012 JMJD1C-AS1 JMJD1C antisense RNA 1 HGNC:28222 ENSG00000272767 . 84989 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.851576882 knock down up-regulate 0.004540274 REG00012 JMJD1C-AS1 JMJD1C antisense RNA 1 HGNC:28222 ENSG00000272767 . 84989 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.700637267 knock down up-regulate 0.040592467 REG00012 FAM222A-AS1 FAM222A antisense RNA 1 HGNC:28223 ENSG00000255650 . 84983 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FAM222A-AS1 FAM222A antisense RNA 1 HGNC:28223 ENSG00000255650 . 84983 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.301940839 knock down down-regulator 0.020083452 REG00012 FAM222A-AS1 FAM222A antisense RNA 1 HGNC:28223 ENSG00000255650 . 84983 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.696072204 knock down down-regulator 0.04003982 REG00012 LINC00467 Long intergenic non-protein coding RNA 467 HGNC:28227 ENSG00000153363 . 84791 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00467 Long intergenic non-protein coding RNA 467 HGNC:28227 ENSG00000153363 . 84791 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.636370356 knock down up-regulate 3.40E-05 REG00012 LINC00467 Long intergenic non-protein coding RNA 467 HGNC:28227 ENSG00000153363 . 84791 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -3.632176462 knock down down-regulator 5.13E-08 REG00012 CASC15 Cancer susceptibility 15 HGNC:28245 ENSG00000272168 . 401237 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.592400888 knock down up-regulate 0.008957308 REG00012 SNHG7 Small nucleolar RNA host gene 7 HGNC:28254 ENSG00000233016 . 84973 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG7 Small nucleolar RNA host gene 7 HGNC:28254 ENSG00000233016 . 84973 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.927737555 knock down down-regulator 0.016550619 REG00012 SNHG7 Small nucleolar RNA host gene 7 HGNC:28254 ENSG00000233016 . 84973 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.09174988 knock down down-regulator 0.001018323 REG00012 SNHG7 Small nucleolar RNA host gene 7 HGNC:28254 ENSG00000233016 . 84973 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.81937722 knock down down-regulator 0.019280391 REG00012 SNHG7 Small nucleolar RNA host gene 7 HGNC:28254 ENSG00000233016 . 84973 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.979148762 knock down down-regulator 0.010918664 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.74525522 knock down up-regulate 0.004411364 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.843396208 knock down up-regulate 0.001157637 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.147608156 knock down down-regulator 0.011743615 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.732438669 knock down up-regulate 0.011597426 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.053691768 knock down up-regulate 0.010671735 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.702551901 knock down up-regulate 0.020051567 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.642607577 knock down down-regulator 0.0096018 REG00012 MIR503HG MIR503 host gene HGNC:28258 ENSG00000223749 . 84848 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.659201809 knock down up-regulate 0.001027453 REG00012 GLIS3-AS1 GLIS3 antisense RNA 1 HGNC:28260 ENSG00000237009 . 84850 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ATP1A1-AS1 ATP1A1 antisense RNA 1 HGNC:28262 ENSG00000203865 ATAS1_HUMAN 84852 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00839 Long intergenic non-protein coding RNA 839 HGNC:28269 ENSG00000185904 . 84856 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.181858617 knock down up-regulate 2.96E-17 REG00012 LINC00839 Long intergenic non-protein coding RNA 839 HGNC:28269 ENSG00000185904 . 84856 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.995670043 knock down up-regulate 5.99E-06 REG00012 LIF-AS2 LIF antisense RNA 2 HGNC:28298 ENSG00000268812 . 91370 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 3.059536251 knock down up-regulate 4.45E-05 REG00012 LIF-AS2 LIF antisense RNA 2 HGNC:28298 ENSG00000268812 . 91370 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 3.149008603 knock down up-regulate 0.000332918 REG00012 TMEM99 KRT10 antisense RNA 1 HGNC:28305 ENSG00000167920 TMM99_HUMAN 147184 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 KRT10-AS1 KRT10 antisense RNA 1 HGNC:28305 ENSG00000167920 TMM99_HUMAN 147184 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.842675226 knock down up-regulate 7.09E-11 REG00012 KRT10-AS1 KRT10 antisense RNA 1 HGNC:28305 ENSG00000167920 TMM99_HUMAN 147184 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.618785595 knock down down-regulator 6.47E-05 REG00012 CTBP1-AS2 CTBP1 divergent transcript HGNC:28307 ENSG00000196810 . 92070 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00311 Long intergenic non-protein coding RNA 311 HGNC:28312 ENSG00000179219 TM148_HUMAN 197196 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.908485642 knock down up-regulate 0.000335571 REG00012 LINC00638 Long intergenic non-protein coding RNA 638 HGNC:28325 ENSG00000258701 . 196872 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.860649563 knock down up-regulate 0.027022771 REG00012 LINC00638 Long intergenic non-protein coding RNA 638 HGNC:28325 ENSG00000258701 . 196872 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -4.120567529 knock down down-regulator 2.02E-09 REG00012 LINC00638 Long intergenic non-protein coding RNA 638 HGNC:28325 ENSG00000258701 . 196872 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.772884459 knock down up-regulate 4.41E-05 REG00012 LINC00638 Long intergenic non-protein coding RNA 638 HGNC:28325 ENSG00000258701 . 196872 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -4.310550466 knock down down-regulator 0.00019481 REG00012 SNAI3-AS1 SNAI3 antisense RNA 1 HGNC:28327 ENSG00000260630 . 197187 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNAI3-AS1 SNAI3 antisense RNA 1 HGNC:28327 ENSG00000260630 . 197187 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.250439285 knock down down-regulator 0.000686998 REG00012 SNAI3-AS1 SNAI3 antisense RNA 1 HGNC:28327 ENSG00000260630 . 197187 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.612766417 knock down down-regulator 0.040761182 REG00012 SNAI3-AS1 SNAI3 antisense RNA 1 HGNC:28327 ENSG00000260630 . 197187 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.620772833 knock down down-regulator 0.034023926 REG00012 SNAI3-AS1 SNAI3 antisense RNA 1 HGNC:28327 ENSG00000260630 . 197187 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.677199849 knock down down-regulator 0.003561436 REG00012 SNAI3-AS1 SNAI3 antisense RNA 1 HGNC:28327 ENSG00000260630 . 197187 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.585771858 knock down down-regulator 0.011270018 REG00012 RHPN1-AS1 RHPN1 antisense RNA 1 (head to head) HGNC:28457 ENSG00000254389 RHAS1_HUMAN 78998 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.816914028 knock out down-regulator 0.000253639 REG00012 C10orf111 RPP38 divergent transcript HGNC:28582 ENSG00000176236 CJ111_HUMAN 221060 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 RPP38-DT RPP38 divergent transcript HGNC:28582 ENSG00000176236 CJ111_HUMAN 221060 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.089948882 knock down down-regulator 0.000439246 REG00012 RPP38-DT RPP38 divergent transcript HGNC:28582 ENSG00000176236 CJ111_HUMAN 221060 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.814085824 knock down down-regulator 0.037538781 REG00012 RPP38-DT RPP38 divergent transcript HGNC:28582 ENSG00000176236 CJ111_HUMAN 221060 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.752482347 knock down down-regulator 0.00360303 REG00012 RPP38-DT RPP38 divergent transcript HGNC:28582 ENSG00000176236 CJ111_HUMAN 221060 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.525390182 knock down up-regulate 0.014170952 REG00012 RPP38-DT RPP38 divergent transcript HGNC:28582 ENSG00000176236 CJ111_HUMAN 221060 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.207593728 knock down down-regulator 0.041050899 REG00012 CIRBP-AS1 CIRBP antisense RNA 1 HGNC:28588 ENSG00000267493 CSAS1_HUMAN 148046 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CIRBP-AS1 CIRBP antisense RNA 1 HGNC:28588 ENSG00000267493 CSAS1_HUMAN 148046 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.332097025 knock down down-regulator 0.004433222 REG00012 CSNK1G2-AS1 CSNK1G2 antisense RNA 1 HGNC:28604 ENSG00000180846 CNAS1_HUMAN 255193 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LRRC75A-AS1 Small nucleolar RNA host gene 29 HGNC:28619 ENSG00000175061 . 125144 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG29 Small nucleolar RNA host gene 29 HGNC:28619 ENSG00000175061 . 125144 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.628047013 knock down down-regulator 0.018461895 REG00012 SNHG29 Small nucleolar RNA host gene 29 HGNC:28619 ENSG00000175061 . 125144 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.2466992 knock down down-regulator 0.001851873 REG00012 LINC01711 Long intergenic non-protein coding RNA 1711 HGNC:28663 ENSG00000268941 . 79160 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.907346664 knock down down-regulator 0.046317581 REG00012 LINC01711 Long intergenic non-protein coding RNA 1711 HGNC:28663 ENSG00000268941 . 79160 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.64311967 knock down up-regulate 0.033854917 REG00012 LINC01711 Long intergenic non-protein coding RNA 1711 HGNC:28663 ENSG00000268941 . 79160 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.708616614 knock down down-regulator 0.018035349 REG00012 CYTOR Cytoskeleton regulator RNA HGNC:28717 ENSG00000222041 . 112597 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CYTOR Cytoskeleton regulator RNA HGNC:28717 ENSG00000222041 . 112597 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.546248829 knock down down-regulator 0.01016246 REG00012 CYTOR Cytoskeleton regulator RNA HGNC:28717 ENSG00000222041 . 112597 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.304469971 knock down up-regulate 7.32E-05 REG00012 CYTOR Cytoskeleton regulator RNA HGNC:28717 ENSG00000222041 . 112597 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.230601594 knock down up-regulate 0.013526207 REG00012 CYTOR Cytoskeleton regulator RNA HGNC:28717 ENSG00000222041 . 112597 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.202832221 knock down up-regulate 0.047786536 REG00012 CYTOR Cytoskeleton regulator RNA HGNC:28717 ENSG00000222041 . 112597 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.715725734 knock down up-regulate 0.007125983 REG00012 LINC00260 Long intergenic non-protein coding RNA 260 HGNC:28770 . . 84719 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RBM12B-AS1 RBM12B antisense RNA 1 HGNC:28818 ENSG00000279331 RBAS1_HUMAN 55472 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 RBM12B-AS1 RBM12B antisense RNA 1 HGNC:28818 ENSG00000279331 RBAS1_HUMAN 55472 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.609609882 knock down down-regulator 0.036593783 REG00012 DISC2 Disrupted in schizophrenia 2 HGNC:2889 . . 27184 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00869 Long intergenic non-protein coding RNA 869 HGNC:29050 ENSG00000277147 F91A2_HUMAN 57234 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 2.269910239 knock down up-regulate 1.27E-15 REG00012 LINC00869 Long intergenic non-protein coding RNA 869 HGNC:29050 ENSG00000277147 F91A2_HUMAN 57234 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.928981141 knock down up-regulate 3.70E-17 REG00012 TP73-AS1 TP73 antisense RNA 1 HGNC:29052 ENSG00000227372 . 57212 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TYMSOS TYMS opposite strand RNA HGNC:29553 ENSG00000176912 TYMOS_HUMAN 494514 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TYMSOS TYMS opposite strand RNA HGNC:29553 ENSG00000176912 TYMOS_HUMAN 494514 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.76001916 knock down down-regulator 0.000179461 REG00012 TYMSOS TYMS opposite strand RNA HGNC:29553 ENSG00000176912 TYMOS_HUMAN 494514 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.784748968 knock down down-regulator 4.91E-06 REG00012 MALAT1 Metastasis associated lung adenocarcinoma transcript 1 HGNC:29665 ENSG00000251562 . 378938 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MALAT1 Metastasis associated lung adenocarcinoma transcript 1 HGNC:29665 ENSG00000251562 . 378938 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -7.034067963 knock down down-regulator 0.000221399 REG00012 MALAT1 Metastasis associated lung adenocarcinoma transcript 1 HGNC:29665 ENSG00000251562 . 378938 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.781126797 knock down up-regulate 0.030552651 REG00012 MALAT1 Metastasis associated lung adenocarcinoma transcript 1 HGNC:29665 ENSG00000251562 . 378938 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.073941982 knock down down-regulator 0.026034011 REG00012 LINC00852 Long intergenic non-protein coding RNA 852 HGNC:29904 ENSG00000231177 . 84657 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC171391 GATD1 divergent transcript HGNC:29907 ENSG00000255284 . 171391 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GATD1-DT GATD1 divergent transcript HGNC:29907 ENSG00000255284 . 171391 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.290221635 knock down up-regulate 1.86E-05 REG00012 GATD1-DT GATD1 divergent transcript HGNC:29907 ENSG00000255284 . 171391 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -2.011470611 knock down down-regulator 7.76E-08 REG00012 GATD1-DT GATD1 divergent transcript HGNC:29907 ENSG00000255284 . 171391 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 2.953245975 knock down up-regulate 0.048503674 REG00012 GATD1-DT GATD1 divergent transcript HGNC:29907 ENSG00000255284 . 171391 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.585235656 knock down down-regulator 0.000588616 REG00012 PWARSN Prader Willi/Angelman region RNA, SNRPN neighbor HGNC:30001 . . 347746 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MIR7-3HG MIR7-3 host gene HGNC:30049 ENSG00000176840 PGSF1_HUMAN 284424 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.864762729 knock down down-regulator 0.003267974 REG00012 SNHG12 Small nucleolar RNA host gene 12 HGNC:30062 ENSG00000197989 SNH12_HUMAN 85028 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.740190236 knock down down-regulator 0.004739797 REG00012 SNHG12 Small nucleolar RNA host gene 12 HGNC:30062 ENSG00000197989 SNH12_HUMAN 85028 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.957698144 knock down down-regulator 0.01716975 REG00012 SNHG12 Small nucleolar RNA host gene 12 HGNC:30062 ENSG00000197989 SNH12_HUMAN 85028 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.746046641 knock down down-regulator 0.000991418 REG00012 PWAR5 Prader Willi/Angelman region RNA 5 HGNC:30090 ENSG00000279192 . 8123 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PWAR5 Prader Willi/Angelman region RNA 5 HGNC:30090 ENSG00000279192 . 8123 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.031 knock out up-regulate 0.002315 REG00012 PWAR5 Prader Willi/Angelman region RNA 5 HGNC:30090 ENSG00000279192 . 8123 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.6074 knock down up-regulate 0.0458 REG00012 PWAR5 Prader Willi/Angelman region RNA 5 HGNC:30090 ENSG00000279192 . 8123 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.7902 knock down down-regulator 1.08E-08 REG00012 PWAR5 Prader Willi/Angelman region RNA 5 HGNC:30090 ENSG00000279192 . 8123 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.6803 knock down down-regulator 0.005721 REG00012 PWAR5 Prader Willi/Angelman region RNA 5 HGNC:30090 ENSG00000279192 . 8123 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.6584 knock down up-regulate 0.01534 REG00012 CPS1-IT1 CPS1 intronic transcript 1 HGNC:30102 ENSG00000280837 . 29034 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 FOXN3-AS2 FOXN3 antisense RNA 2 HGNC:30119 ENSG00000259073 . 29018 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00167 PRDM10 divergent transcript HGNC:30468 ENSG00000233220 CK037_HUMAN 440072 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00102 Long intergenic non-protein coding RNA 102 HGNC:30470 ENSG00000230542 . 100359394 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SMAD5-AS1 SMAD5 antisense RNA 1 HGNC:30586 ENSG00000164621 SMA5O_HUMAN 9597 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 SMAD5-AS1 SMAD5 antisense RNA 1 HGNC:30586 ENSG00000164621 SMA5O_HUMAN 9597 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PRR26 DIP2C antisense RNA 1 HGNC:30724 ENSG00000180525 PRR26_HUMAN 414235 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DIP2C-AS1 DIP2C antisense RNA 1 HGNC:30724 ENSG00000180525 PRR26_HUMAN 414235 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.30640866 knock down up-regulate 0.00022446 REG00012 DIP2C-AS1 DIP2C antisense RNA 1 HGNC:30724 ENSG00000180525 PRR26_HUMAN 414235 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.19826628 knock down down-regulator 2.86E-05 REG00012 EPB41L4A-AS1 EPB41L4A antisense RNA 1 HGNC:30749 ENSG00000224032 . 114915 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 EPB41L4A-AS1 EPB41L4A antisense RNA 1 HGNC:30749 ENSG00000224032 . 114915 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.809117376 knock down up-regulate 0.023183471 REG00012 NEAT1 Nuclear paraspeckle assembly transcript 1 HGNC:30815 ENSG00000245532 . 283131 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.83E+00 . . . REG00012 NEAT1 Nuclear paraspeckle assembly transcript 1 HGNC:30815 ENSG00000245532 . 283131 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NEAT1 Nuclear paraspeckle assembly transcript 1 HGNC:30815 ENSG00000245532 . 283131 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.194469679 knock down down-regulator 0.000403014 REG00012 NEAT1 Nuclear paraspeckle assembly transcript 1 HGNC:30815 ENSG00000245532 . 283131 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.731146728 knock down down-regulator 0.002715228 REG00012 IDI2-AS1 IDI2 antisense RNA 1 HGNC:30885 ENSG00000232656 IDAS1_HUMAN 55853 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 GRASLND Glycosaminoglycan regulatory associated long non-coding RNA HGNC:30963 ENSG00000228203 . 386597 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.870987534 knock down down-regulator 0.00028645 REG00012 GRASLND Glycosaminoglycan regulatory associated long non-coding RNA HGNC:30963 ENSG00000228203 . 386597 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.703390855 knock down up-regulate 6.77E-05 REG00012 LINC00200 Long intergenic non-protein coding RNA 200 HGNC:30974 ENSG00000229205 . 399706 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HCG17 HLA complex group 17 HGNC:31339 ENSG00000270604 . 414778 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CACTIN-AS1 CACTIN antisense RNA 1 HGNC:31391 ENSG00000226800 CAAS1_HUMAN 404665 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00092 Long intergenic non-protein coding RNA 92 HGNC:31408 ENSG00000225194 . 100188953 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 C9orf139 Long intergenic non-protein coding RNA 2908 HGNC:31426 ENSG00000180539 CI139_HUMAN 401563 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00595 Long intergenic non-protein coding RNA 595 HGNC:31430 ENSG00000230417 . 414243 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.74655099 knock down up-regulate 0.000166825 REG00012 DNAJC9-AS1 DNAJC9 and MRPS16 antisense RNA 1 HGNC:31432 ENSG00000236756 DAS1_HUMAN 414245 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CASC10 MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.701328548 knock down up-regulate 0.011735295 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.136620781 knock out down-regulator 0.023657754 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.663650011 knock down down-regulator 0.025109136 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.626749735 knock down down-regulator 0.004879605 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.695541872 knock down down-regulator 0.00830513 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.621521465 knock down up-regulate 0.001069234 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.640859343 knock down down-regulator 0.001976913 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.717951542 knock down up-regulate 0.010720534 REG00012 MIR1915HG MIR1915 host gene HGNC:31448 ENSG00000204682 CSC10_HUMAN 399726 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.917316175 knock down up-regulate 0.000407715 REG00012 DLGAP1-AS1 DLGAP1 antisense RNA 1 HGNC:31676 ENSG00000177337 . 649446 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DLGAP1-AS1 DLGAP1 antisense RNA 1 HGNC:31676 ENSG00000177337 . 649446 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.781316272 knock down down-regulator 0.010271243 REG00012 DLGAP1-AS1 DLGAP1 antisense RNA 1 HGNC:31676 ENSG00000177337 . 649446 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.688673346 knock down up-regulate 0.00185176 REG00012 LINC00106 Long intergenic non-protein coding RNA 106 HGNC:31843 ENSG00000236871 . 751580 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 UCKL1-AS1 UCKL1 antisense RNA 1 HGNC:31967 ENSG00000280213 . 100113386 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SERTAD4-AS1 SERTAD4 antisense RNA 1 HGNC:32019 ENSG00000203706 SEAS1_HUMAN 574036 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.736828114 knock down up-regulate 0.001012915 REG00012 SERTAD4-AS1 SERTAD4 antisense RNA 1 HGNC:32019 ENSG00000203706 SEAS1_HUMAN 574036 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.165039019 knock down up-regulate 7.47E-05 REG00012 SERTAD4-AS1 SERTAD4 antisense RNA 1 HGNC:32019 ENSG00000203706 SEAS1_HUMAN 574036 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.746414212 knock out up-regulate 7.84E-06 REG00012 SERTAD4-AS1 SERTAD4 antisense RNA 1 HGNC:32019 ENSG00000203706 SEAS1_HUMAN 574036 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.648575261 knock down up-regulate 0.001971144 REG00012 LINC00051 Long intergenic non-protein coding RNA 51 HGNC:32028 ENSG00000254008 . 619434 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ADAMTSL4-AS1 ADAMTSL4 antisense RNA 1 HGNC:32041 ENSG00000203804 A4AS1_HUMAN 574406 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02817 Long intergenic non-protein coding RNA 2817 HGNC:32042 ENSG00000234754 . 400804 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.775130768 knock out down-regulator 6.01E-09 REG00012 LINC02869 Long intergenic non-protein coding RNA 2869 HGNC:32045 ENSG00000228208 . 440714 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 2.236392471 knock down up-regulate 4.84E-51 REG00012 LINC02869 Long intergenic non-protein coding RNA 2869 HGNC:32045 ENSG00000228208 . 440714 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.52331289 knock down up-regulate 7.57E-32 REG00012 C1orf145 OBSCN antisense RNA 1 HGNC:32047 ENSG00000162913 OBAS1_HUMAN 574407 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 OBSCN-AS1 OBSCN antisense RNA 1 HGNC:32047 ENSG00000162913 OBAS1_HUMAN 574407 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.736707161 knock down down-regulator 0.009007938 REG00012 OBSCN-AS1 OBSCN antisense RNA 1 HGNC:32047 ENSG00000162913 OBAS1_HUMAN 574407 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.791704319 knock down up-regulate 0.000381921 REG00012 IBA57-DT IBA57 divergent transcript HGNC:32062 ENSG00000203684 IBADT_HUMAN 574432 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -2.546880777 knock down down-regulator 0.002485872 REG00012 IBA57-DT IBA57 divergent transcript HGNC:32062 ENSG00000203684 IBADT_HUMAN 574432 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -3.413458923 knock down down-regulator 0.006048263 REG00012 RAD21-AS1 RAD21 antisense RNA 1 HGNC:32158 ENSG00000253327 . 644660 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 C8orf49 Long intergenic non-protein coding RNA 2905 HGNC:32200 ENSG00000255394 . 606553 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TMEM75 Long intergenic non-protein coding RNA 2912 HGNC:32295 ENSG00000280055 TMM75_HUMAN 641384 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SSBP3-AS1 SSBP3 antisense RNA 1 HGNC:32328 ENSG00000198711 SSAS1_HUMAN 619518 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 C1orf195 TMEM51 antisense RNA 2 HGNC:32332 ENSG00000204464 . 727684 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FAM99B Family with sequence similarity 99 member B HGNC:32369 ENSG00000205865 . 100132464 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 IGF2BP2-AS1 IGF2BP2 antisense RNA 1 HGNC:32674 ENSG00000163915 IFAS1_HUMAN 646600 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG1 Small nucleolar RNA host gene 1 HGNC:32688 ENSG00000255717 . 23642 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.70E+00 . . . REG00012 SNHG1 Small nucleolar RNA host gene 1 HGNC:32688 ENSG00000255717 . 23642 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.051162716 knock down down-regulator 0.00168493 REG00012 SNHG1 Small nucleolar RNA host gene 1 HGNC:32688 ENSG00000255717 . 23642 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.707117754 knock down down-regulator 0.027782863 REG00012 SNHG1 Small nucleolar RNA host gene 1 HGNC:32688 ENSG00000255717 . 23642 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.149780867 knock down down-regulator 0.002986047 REG00012 SNHG4 Small nucleolar RNA host gene 4 HGNC:32964 ENSG00000281398 . 724102 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.05876437 knock down down-regulator 0.004095342 REG00012 SNHG4 Small nucleolar RNA host gene 4 HGNC:32964 ENSG00000281398 . 724102 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.612821003 knock down down-regulator 0.011249619 REG00012 SNHG4 Small nucleolar RNA host gene 4 HGNC:32964 ENSG00000281398 . 724102 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.93995899 knock down down-regulator 0.00306244 REG00012 SNHG4 Small nucleolar RNA host gene 4 HGNC:32964 ENSG00000281398 . 724102 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.658071252 knock down down-regulator 0.008781399 REG00012 SNHG6 Small nucleolar RNA host gene 6 HGNC:32965 ENSG00000245910 . 641638 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.43E+00 . . . REG00012 SNHG6 Small nucleolar RNA host gene 6 HGNC:32965 ENSG00000245910 . 641638 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SNHG6 Small nucleolar RNA host gene 6 HGNC:32965 ENSG00000245910 . 641638 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.889685087 knock down down-regulator 0.000737079 REG00012 SNHG6 Small nucleolar RNA host gene 6 HGNC:32965 ENSG00000245910 . 641638 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.082660224 knock down down-regulator 0.001333866 REG00012 SNHG8 Small nucleolar RNA host gene 8 HGNC:33098 ENSG00000269893 . 100093630 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.02E+00 . . . REG00012 SNHG8 Small nucleolar RNA host gene 8 HGNC:33098 ENSG00000269893 . 100093630 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.908845521 knock down down-regulator 0.005314672 REG00012 SNHG8 Small nucleolar RNA host gene 8 HGNC:33098 ENSG00000269893 . 100093630 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.777766961 knock down down-regulator 0.00538747 REG00012 SNHG20 Small nucleolar RNA host gene 20 HGNC:33099 ENSG00000234912 . 654434 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.661055117 knock down down-regulator 0.026221527 REG00012 SNHG20 Small nucleolar RNA host gene 20 HGNC:33099 ENSG00000234912 . 654434 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.749080032 knock down down-regulator 0.017963743 REG00012 SNHG20 Small nucleolar RNA host gene 20 HGNC:33099 ENSG00000234912 . 654434 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.096970514 knock down down-regulator 0.00211206 REG00012 SNHG20 Small nucleolar RNA host gene 20 HGNC:33099 ENSG00000234912 . 654434 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.765175159 knock down down-regulator 0.016599031 REG00012 ZFAS1 ZNFX1 antisense RNA 1 HGNC:33101 ENSG00000177410 . 441951 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ZFAS1 ZNFX1 antisense RNA 1 HGNC:33101 ENSG00000177410 . 441951 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.565083307 knock down down-regulator 0.015667726 REG00012 ZFAS1 ZNFX1 antisense RNA 1 HGNC:33101 ENSG00000177410 . 441951 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.81704787 knock down down-regulator 0.005525168 REG00012 LINC00163 Long intergenic non-protein coding RNA 163 HGNC:33165 ENSG00000234880 . 727699 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HOTAIR HOX transcript antisense RNA HGNC:33510 ENSG00000228630 . 100124700 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.055085278 knock down down-regulator 7.98E-05 REG00012 LINC00322 Long intergenic non-protein coding RNA 322 HGNC:33698 ENSG00000237864 CU136_HUMAN 100126693 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.504555035 knock out up-regulate 0.000574634 REG00012 LINC02897 Long intergenic non-protein coding RNA 2897 HGNC:33759 ENSG00000221953 . 388759 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.585849106 knock down down-regulator 1.36E-08 REG00012 LINC02897 Long intergenic non-protein coding RNA 2897 HGNC:33759 ENSG00000221953 . 388759 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.464319791 knock down down-regulator 3.78E-09 REG00012 GATA3-AS1 GATA3 antisense RNA 1 HGNC:33786 ENSG00000197308 . 399717 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 COLCA1 Colorectal cancer associated 1 HGNC:33789 ENSG00000196167 COLC1_HUMAN 399948 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00173 Long intergenic non-protein coding RNA 173 HGNC:33791 ENSG00000196668 YL023_HUMAN 100287569 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.560472196 knock out down-regulator 0.002266877 REG00012 C5orf56 IRF1 antisense RNA 1 HGNC:33838 ENSG00000197536 IRAS1_HUMAN 441108 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 IRF1-AS1 IRF1 antisense RNA 1 HGNC:33838 ENSG00000197536 IRAS1_HUMAN 441108 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.793499881 knock down up-regulate 0.00299052 REG00012 IRF1-AS1 IRF1 antisense RNA 1 HGNC:33838 ENSG00000197536 IRAS1_HUMAN 441108 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.061708178 knock down up-regulate 1.11E-06 REG00012 IRF1-AS1 IRF1 antisense RNA 1 HGNC:33838 ENSG00000197536 IRAS1_HUMAN 441108 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.773514257 knock down down-regulator 0.003924089 REG00012 PAK6-AS1 PAK6 antisense RNA 1 HGNC:33868 ENSG00000176753 CO056_HUMAN 644809 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.598490685 knock down up-regulate 0.042295849 REG00012 PAK6-AS1 PAK6 antisense RNA 1 HGNC:33868 ENSG00000176753 CO056_HUMAN 644809 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.851911653 knock down down-regulator 0.005833908 REG00012 PAK6-AS1 PAK6 antisense RNA 1 HGNC:33868 ENSG00000176753 CO056_HUMAN 644809 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.978812908 knock down up-regulate 0.034697239 REG00012 GHRLOS Ghrelin opposite strand/antisense RNA HGNC:33885 ENSG00000240288 . 100126793 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 FAM157C Family with sequence similarity 157 member C HGNC:34081 ENSG00000260528 F157C_HUMAN 100996541 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 HAS2-AS1 HAS2 antisense RNA 1 HGNC:34340 ENSG00000248690 . 594842 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.628629288 knock down up-regulate 0.000358167 REG00012 HAS2-AS1 HAS2 antisense RNA 1 HGNC:34340 ENSG00000248690 . 594842 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.139084266 knock down down-regulator 1.63E-18 REG00012 CDKN2B-AS1 CDKN2B antisense RNA 1 HGNC:34341 ENSG00000240498 . 100048912 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -3.791264309 knock down down-regulator 0.001877128 REG00012 CDKN2B-AS1 CDKN2B antisense RNA 1 HGNC:34341 ENSG00000240498 . 100048912 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.580278868 knock down up-regulate 0.03927545 REG00012 ARIH2OS ARIH2 opposite strand lncRNA HGNC:34425 ENSG00000221883 ARI2O_HUMAN 646450 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 FAM182B Family with sequence similarity 182 member B HGNC:34503 ENSG00000175170 F182B_HUMAN 728882 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.624337682 knock down down-regulator 0.018279929 REG00012 AIRN Antisense of IGF2R non-protein coding RNA HGNC:34515 ENSG00000268257 . 100271873 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 BOK-AS1 BOK antisense RNA 1 HGNC:35125 ENSG00000234235 . 100379249 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PEG3-AS1 PEG3 antisense RNA 1 HGNC:35127 . . 100169890 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PAPPA-AS1 PAPPA antisense RNA 1 HGNC:35152 ENSG00000256040 PAPAS_HUMAN 493913 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MIR4435-2HG MIR4435-2 host gene HGNC:35163 ENSG00000172965 . 541471 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MIR4435-2HG MIR4435-2 host gene HGNC:35163 ENSG00000172965 . 541471 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.47036528 knock down up-regulate 0.020651173 REG00012 MIR4435-2HG MIR4435-2 host gene HGNC:35163 ENSG00000172965 . 541471 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.024904546 knock out up-regulate 0.00011806 REG00012 MIR4435-2HG MIR4435-2 host gene HGNC:35163 ENSG00000172965 . 541471 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.632295715 knock down up-regulate 0.047737426 REG00012 DYM-AS1 DYM antisense RNA 1 HGNC:37046 ENSG00000264269 . 100129878 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.134957485 knock down down-regulator 0.007765777 REG00012 DYM-AS1 DYM antisense RNA 1 HGNC:37046 ENSG00000264269 . 100129878 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.899125968 knock down up-regulate 0.000782317 REG00012 NRON Non-coding repressor of NFAT HGNC:37079 ENSG00000253079 . 641373 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HOTAIRM1 HOXA transcript antisense RNA, myeloid-specific 1 HGNC:37117 ENSG00000233429 . 100506311 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 BACE1-AS BACE1 antisense RNA HGNC:37125 ENSG00000278768 . 100379571 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 BACE1-AS BACE1 antisense RNA HGNC:37125 ENSG00000278768 . 100379571 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.532912094 knock down up-regulate 1.59E-70 REG00012 BACE1-AS BACE1 antisense RNA HGNC:37125 ENSG00000278768 . 100379571 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.801383562 knock down down-regulator 0.018321069 REG00012 UCA1 Urothelial cancer associated 1 HGNC:37126 ENSG00000214049 . 652995 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.650368741 knock down up-regulate 0.001157686 REG00012 UCA1 Urothelial cancer associated 1 HGNC:37126 ENSG00000214049 . 652995 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.832891081 knock down down-regulator 0.002391388 REG00012 UCA1 Urothelial cancer associated 1 HGNC:37126 ENSG00000214049 . 652995 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.557191416 knock down up-regulate 0.000203525 REG00012 EGOT Eosinophil granule ontogeny transcript HGNC:37129 ENSG00000235947 . 100126791 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.948313573 knock down down-regulator 0.000530934 REG00012 EGOT Eosinophil granule ontogeny transcript HGNC:37129 ENSG00000235947 . 100126791 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.960220936 knock down down-regulator 4.33E-05 REG00012 A1BG-AS1 A1BG antisense RNA 1 HGNC:37133 ENSG00000268895 . 503538 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.640308466 knock down up-regulate 0.041981345 REG00012 DLX6-AS1 DLX6 antisense RNA 1 HGNC:37151 ENSG00000231764 . 285987 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.79539388 knock down down-regulator 0.035432885 REG00012 DLX6-AS1 DLX6 antisense RNA 1 HGNC:37151 ENSG00000231764 . 285987 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.596857825 knock down up-regulate 0.003334727 REG00012 NCRUPAR Non-protein coding RNA, upstream of F2R/PAR1 HGNC:37153 . . 100302746 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CT75 Cancer/testis associated transcript 75 HGNC:37174 ENSG00000237732 . 440934 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.708402413 knock down up-regulate 0.003024444 REG00012 MIRLET7DHG Long intergenic non-protein coding RNA 2603 HGNC:37186 ENSG00000230262 . 158257 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 2.47E+00 . . . REG00012 MIR31HG MIR31 host gene HGNC:37187 ENSG00000171889 . 554202 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.874705343 knock down down-regulator 0.00142806 REG00012 MIR31HG MIR31 host gene HGNC:37187 ENSG00000171889 . 554202 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.024562914 knock down down-regulator 0.001596707 REG00012 MIR181A2HG MIR181A2 host gene HGNC:37188 ENSG00000224020 . 100379345 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MIR181A2HG MIR181A2 host gene HGNC:37188 ENSG00000224020 . 100379345 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.842186711 knock down up-regulate 0.00821043 REG00012 MIR181A2HG MIR181A2 host gene HGNC:37188 ENSG00000224020 . 100379345 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.600790167 knock down down-regulator 0.008190466 REG00012 MIRLET7BHG MIRLET7B host gene HGNC:37189 ENSG00000197182 . 400931 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.1500937 knock down up-regulate 0.008888742 REG00012 MIRLET7BHG MIRLET7B host gene HGNC:37189 ENSG00000197182 . 400931 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.151314965 knock down down-regulator 0.003961617 REG00012 MIRLET7BHG MIRLET7B host gene HGNC:37189 ENSG00000197182 . 400931 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.96617983 knock down up-regulate 0.012571894 REG00012 MIRLET7BHG MIRLET7B host gene HGNC:37189 ENSG00000197182 . 400931 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.825766997 knock down down-regulator 0.008663214 REG00012 MIRLET7BHG MIRLET7B host gene HGNC:37189 ENSG00000197182 . 400931 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.099821337 knock down down-regulator 5.80E-05 REG00012 FTX FTX transcript, XIST regulator HGNC:37190 ENSG00000230590 . 100302692 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.766498665 knock down up-regulate 0.00687074 REG00012 FTX FTX transcript, XIST regulator HGNC:37190 ENSG00000230590 . 100302692 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.604151367 knock down down-regulator 8.47E-15 REG00012 JPX JPX transcript, XIST activator HGNC:37191 ENSG00000225470 . 554203 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.23329962 knock down down-regulator 0.000146415 REG00012 JPX JPX transcript, XIST activator HGNC:37191 ENSG00000225470 . 554203 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.377526536 knock down down-regulator 7.29E-05 REG00012 SNHG14 Small nucleolar RNA host gene 14 HGNC:37462 ENSG00000224078 . 104472715 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.801542113 knock down down-regulator 0.011627543 REG00012 SNHG14 Small nucleolar RNA host gene 14 HGNC:37462 ENSG00000224078 . 104472715 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.711999184 knock down down-regulator 0.010468913 REG00012 NPPA-AS1 NPPA antisense RNA 1 HGNC:37635 ENSG00000242349 . 100379251 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NPPA-AS1 NPPA antisense RNA 1 HGNC:37635 ENSG00000242349 . 100379251 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.832679302 knock down up-regulate 0.036651126 REG00012 NPPA-AS1 NPPA antisense RNA 1 HGNC:37635 ENSG00000242349 . 100379251 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.824351547 knock down down-regulator 0.001804443 REG00012 LINC01001 Long intergenic non-protein coding RNA 1001 HGNC:38540 ENSG00000230724 . 100133161 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01000 Long intergenic non-protein coding RNA 1000 HGNC:38541 . . 402483 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00273 Long intergenic non-protein coding RNA 273 HGNC:38595 ENSG00000256642 . 649159 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.69E+00 . . . REG00012 WASIR2 WASH and IL9R antisense RNA 2 HGNC:38609 ENSG00000231439 . 100132169 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NLGN4Y-AS1 NLGN4Y antisense RNA 1 HGNC:38793 ENSG00000228787 . 100874056 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PINK1-AS PINK1 antisense RNA HGNC:38872 ENSG00000117242 . 100861548 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PINK1-AS PINK1 antisense RNA HGNC:38872 ENSG00000117242 . 100861548 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.652304977 knock down up-regulate 1.08E-05 REG00012 PINK1-AS PINK1 antisense RNA HGNC:38872 ENSG00000117242 . 100861548 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.95231174 knock down up-regulate 0.002160693 REG00012 COX10-AS1 COX10 divergent transcript HGNC:38873 ENSG00000236088 . 100874058 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 COX10-DT COX10 divergent transcript HGNC:38873 ENSG00000236088 . 100874058 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.641086225 knock down down-regulator 0.011013644 REG00012 COX10-DT COX10 divergent transcript HGNC:38873 ENSG00000236088 . 100874058 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.718833132 knock down up-regulate 1.96E-05 REG00012 FLVCR1-DT FLVCR1 divergent transcript HGNC:39077 ENSG00000198468 LQK1_HUMAN 642946 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.596147355 knock down up-regulate 2.31E-05 REG00012 FLVCR1-DT FLVCR1 divergent transcript HGNC:39077 ENSG00000198468 LQK1_HUMAN 642946 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.078046803 knock down down-regulator 0.003897067 REG00012 FLVCR1-DT FLVCR1 divergent transcript HGNC:39077 ENSG00000198468 LQK1_HUMAN 642946 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.428932795 knock down down-regulator 0.024103268 REG00012 ESRG Embryonic stem cell related HGNC:39079 ENSG00000265992 ESRG_HUMAN 790952 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MIR100HG Mir-100-let-7a-2-mir-125b-1 cluster host gene HGNC:39522 ENSG00000255248 . 399959 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.587832728 knock down down-regulator 0.026109734 REG00012 MIR100HG Mir-100-let-7a-2-mir-125b-1 cluster host gene HGNC:39522 ENSG00000255248 . 399959 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.665672672 knock down down-regulator 0.003658783 REG00012 MIR100HG Mir-100-let-7a-2-mir-125b-1 cluster host gene HGNC:39522 ENSG00000255248 . 399959 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.740132561 knock down down-regulator 0.006918829 REG00012 MIR100HG Mir-100-let-7a-2-mir-125b-1 cluster host gene HGNC:39522 ENSG00000255248 . 399959 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.723286901 knock down up-regulate 0.035128724 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.81647523 knock down up-regulate 0.000155935 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.604040101 knock down down-regulator 2.45E-05 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.648793165 knock down up-regulate 0.004434338 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.502576673 knock down up-regulate 0.000341629 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.22409696 knock down down-regulator 0.043852348 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.013718591 knock down up-regulate 0.00715983 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.826700439 knock down down-regulator 0.020176423 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.031742608 knock down up-regulate 0.009017566 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.704485645 knock down up-regulate 0.008525604 REG00012 MIR210HG MIR210 host gene HGNC:39524 ENSG00000247095 . 100506211 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.911312709 knock down up-regulate 0.021758705 REG00012 CYYR1-AS1 CYYR1 antisense RNA 1 HGNC:39560 ENSG00000197934 . 100996571 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PAXBP1-AS1 PAXBP1 antisense RNA 1 HGNC:39603 ENSG00000238197 . 100506215 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.782760502 knock down down-regulator 0.000989858 REG00012 PAXBP1-AS1 PAXBP1 antisense RNA 1 HGNC:39603 ENSG00000238197 . 100506215 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.051665446 knock down down-regulator 0.000988619 REG00012 HLA-DQB1-AS1 HLA-DQB1 antisense RNA 1 HGNC:39762 ENSG00000223534 . 106480429 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MDC1-AS1 MDC1 antisense RNA 1 HGNC:39764 ENSG00000224328 . 106478956 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SOX21-AS1 SOX21 antisense divergent transcript 1 HGNC:39807 ENSG00000227640 . 100507533 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.799648581 knock down down-regulator 0.005878757 REG00012 SOX21-AS1 SOX21 antisense divergent transcript 1 HGNC:39807 ENSG00000227640 . 100507533 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.881091688 knock down down-regulator 0.005832583 REG00012 MCF2L-AS1 MCF2L antisense RNA 1 HGNC:39825 ENSG00000235280 . 100289410 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 MCF2L-AS1 MCF2L antisense RNA 1 HGNC:39825 ENSG00000235280 . 100289410 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MCF2L-AS1 MCF2L antisense RNA 1 HGNC:39825 ENSG00000235280 . 100289410 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.825553813 knock down up-regulate 5.33E-05 REG00012 MCF2L-AS1 MCF2L antisense RNA 1 HGNC:39825 ENSG00000235280 . 100289410 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.65037246 knock down up-regulate 1.91E-24 REG00012 PCOTH Prostate and testis expressed opposite C1QTNF9B and MIPEP HGNC:39839 ENSG00000205861 PCOTH_HUMAN 542767 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.857944709 knock down down-regulator 0.016988278 REG00012 DCUN1D2-AS DCUN1D2 antisense RNA HGNC:39889 ENSG00000233613 . 100874229 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 ANKRD10-IT1 ANKRD10 intronic transcript 1 HGNC:39891 ENSG00000229152 . 100505494 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 ANKRD10-IT1 ANKRD10 intronic transcript 1 HGNC:39891 ENSG00000229152 . 100505494 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.882924772 knock down down-regulator 9.11E-06 REG00012 ANKRD10-IT1 ANKRD10 intronic transcript 1 HGNC:39891 ENSG00000229152 . 100505494 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.873590712 knock down down-regulator 5.00E-10 REG00012 ANKRD10-IT1 ANKRD10 intronic transcript 1 HGNC:39891 ENSG00000229152 . 100505494 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.693306055 knock down down-regulator 0.002188549 REG00012 CPB2-AS1 CPB2 antisense RNA 1 HGNC:39898 ENSG00000235903 . 100509894 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CLDN10-AS1 CLDN10 antisense RNA 1 HGNC:39907 ENSG00000223392 . 100874194 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.908023412 knock down up-regulate 0.014026147 REG00012 CLDN10-AS1 CLDN10 antisense RNA 1 HGNC:39907 ENSG00000223392 . 100874194 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.961448378 knock down down-regulator 0.001692235 REG00012 GPC6-AS1 GPC6 antisense RNA 1 HGNC:39909 ENSG00000236520 . 100873972 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GPC6-AS2 GPC6 antisense RNA 2 HGNC:39910 ENSG00000224394 . 100873973 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GRTP1-AS1 GRTP1 antisense RNA 1 HGNC:39917 ENSG00000225083 . 100874068 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PAN3-AS1 PAN3 antisense RNA 1 HGNC:39932 ENSG00000261485 . 100288730 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SPG20-AS1 SPART antisense RNA 1 HGNC:39933 ENSG00000120664 SPGOS_HUMAN 100507135 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 STK24-AS1 STK24 antisense RNA 1 HGNC:39935 ENSG00000224418 . 100874069 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.850006841 knock out down-regulator 0.009638242 REG00012 USP12-AS1 USP12 antisense RNA 1 HGNC:39961 ENSG00000232162 . 100874070 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RNASEH2B-AS1 RNASEH2B antisense RNA 1 HGNC:39967 ENSG00000233672 . 100874255 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SMARCA5-AS1 SMARCA5 antisense RNA 1 HGNC:39982 ENSG00000245112 . 100128055 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SMARCA5-AS1 SMARCA5 antisense RNA 1 HGNC:39982 ENSG00000245112 . 100128055 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.81360533 knock out down-regulator 0.001231288 REG00012 SMARCA5-AS1 SMARCA5 antisense RNA 1 HGNC:39982 ENSG00000245112 . 100128055 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.909715988 knock down down-regulator 0.008243277 REG00012 SMARCA5-AS1 SMARCA5 antisense RNA 1 HGNC:39982 ENSG00000245112 . 100128055 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.907288748 knock down down-regulator 0.002508334 REG00012 ROPN1L-AS1 ROPN1L antisense RNA 1 HGNC:39984 ENSG00000250600 . 100505845 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ROPN1L-AS1 ROPN1L antisense RNA 1 HGNC:39984 ENSG00000250600 . 100505845 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.427418222 knock out down-regulator 0.001839138 REG00012 RBMS3-AS3 RBMS3 antisense RNA 3 HGNC:39989 ENSG00000235904 . 100873979 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.415333546 knock out down-regulator 0.000659859 REG00012 RERG-IT1 RERG intronic transcript 1 HGNC:39991 ENSG00000256650 . 100874290 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.195993108 knock down up-regulate 0.000303258 REG00012 TRAF3IP2-AS1 TRAF3IP2 antisense RNA 1 HGNC:40005 ENSG00000231889 . 643749 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TRAF3IP2-AS1 TRAF3IP2 antisense RNA 1 HGNC:40005 ENSG00000231889 . 643749 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.367465427 knock down down-regulator 0.00062615 REG00012 TRAF3IP2-AS1 TRAF3IP2 antisense RNA 1 HGNC:40005 ENSG00000231889 . 643749 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 2.98867203 knock down up-regulate 6.64E-05 REG00012 BACH1-IT1 BACH1 intronic transcript 1 HGNC:40006 ENSG00000248476 . 0 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -3.40318971 knock down down-regulator 2.55E-13 REG00012 BACH1-IT1 BACH1 intronic transcript 1 HGNC:40006 ENSG00000248476 . 0 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.597404095 knock out down-regulator 0.000886885 REG00012 BACH1-IT2 BACH1 intronic transcript 2 HGNC:40007 ENSG00000228817 . 100874322 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 BACH1-IT2 BACH1 intronic transcript 2 HGNC:40007 ENSG00000228817 . 100874322 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.201498867 knock down down-regulator 3.87E-09 REG00012 SHANK2-AS1 SHANK2 antisense RNA 1 HGNC:40014 ENSG00000226627 . 100874198 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 APOA1-AS APOA1 antisense RNA HGNC:40079 ENSG00000235910 . 104326055 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 APOA1-AS APOA1 antisense RNA HGNC:40079 ENSG00000235910 . 104326055 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.883149026 knock down up-regulate 0.015228603 REG00012 APOA1-AS APOA1 antisense RNA HGNC:40079 ENSG00000235910 . 104326055 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.879934699 knock down up-regulate 0.001962263 REG00012 ARSD-AS1 ARSD antisense RNA 1 HGNC:40085 ENSG00000229851 . 100506356 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ARSD-AS1 ARSD antisense RNA 1 HGNC:40085 ENSG00000229851 . 100506356 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.725114841 knock down down-regulator 0.035254907 REG00012 ATP1B3-AS1 ATP1B3 antisense RNA 1 HGNC:40088 ENSG00000244124 . 100874077 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.713896776 knock down down-regulator 9.75E-06 REG00012 B4GALT4-AS1 B4GALT4 antisense RNA 1 HGNC:40090 ENSG00000240254 . 100874201 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MAGI1-AS1 MAGI1 antisense RNA 1 HGNC:40091 ENSG00000240175 . 100873983 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 BCAR3-AS1 BCAR3 antisense RNA 1 HGNC:40093 ENSG00000224093 . 100129046 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.692749415 knock down up-regulate 0.001019973 REG00012 BCAR3-AS1 BCAR3 antisense RNA 1 HGNC:40093 ENSG00000224093 . 100129046 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.751023684 knock down up-regulate 0.000398339 REG00012 BMP7-AS1 BMP7 antisense RNA 1 HGNC:40096 ENSG00000235032 . 102723590 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DST-AS1 DST antisense RNA 1 HGNC:40098 ENSG00000231441 . 101930010 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.73491789 knock down down-regulator 0.016292029 REG00012 DST-AS1 DST antisense RNA 1 HGNC:40098 ENSG00000231441 . 101930010 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.963321824 knock down up-regulate 0.001717169 REG00012 DST-AS1 DST antisense RNA 1 HGNC:40098 ENSG00000231441 . 101930010 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.591307661 knock down down-regulator 0.003727812 REG00012 DST-AS1 DST antisense RNA 1 HGNC:40098 ENSG00000231441 . 101930010 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.63871403 knock down down-regulator 0.029729553 REG00012 SETD4-AS1 SETD4 antisense RNA 1 HGNC:40104 ENSG00000236677 . 105369295 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.602704616 knock down down-regulator 0.000201242 REG00012 MRAP-AS1 MRAP antisense RNA 1 HGNC:40108 ENSG00000232623 . 105372779 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.664497734 knock down down-regulator 0.03880223 REG00012 MRAP-AS1 MRAP antisense RNA 1 HGNC:40108 ENSG00000232623 . 105372779 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.742970228 knock down up-regulate 0.032996261 REG00012 EML4-AS1 EML4 antisense RNA 1 HGNC:40112 ENSG00000224875 . 102723824 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.810015197 knock down down-regulator 0.002355339 REG00012 EML4-AS1 EML4 antisense RNA 1 HGNC:40112 ENSG00000224875 . 102723824 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.443244556 knock down up-regulate 2.71E-05 REG00012 CARS1-AS1 CARS1 antisense RNA 1 HGNC:40125 ENSG00000247473 . 100852407 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.896928407 knock down down-regulator 0.001254821 REG00012 CCNT2-AS1 CCNT2 antisense RNA 1 HGNC:40130 ENSG00000224043 . 100129961 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.730133824 knock down down-regulator 0.044643827 REG00012 CCNT2-AS1 CCNT2 antisense RNA 1 HGNC:40130 ENSG00000224043 . 100129961 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -2.716793391 knock down down-regulator 0.017138237 REG00012 CD44-AS1 CD44 antisense RNA 1 HGNC:40133 ENSG00000255443 . 109729172 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -2.02885785 knock down down-regulator 0.047660993 REG00012 CD44-AS1 CD44 antisense RNA 1 HGNC:40133 ENSG00000255443 . 109729172 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.684423568 knock down down-regulator 0.016690852 REG00012 CDK6-AS1 CDK6 antisense RNA 1 HGNC:40141 ENSG00000237819 . 101927497 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.597428115 knock down up-regulate 0.006166581 REG00012 CDK6-AS1 CDK6 antisense RNA 1 HGNC:40141 ENSG00000237819 . 101927497 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -3.402688056 knock down down-regulator 0.006491802 REG00012 CDK6-AS1 CDK6 antisense RNA 1 HGNC:40141 ENSG00000237819 . 101927497 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.083283323 knock out down-regulator 0.002072601 REG00012 CDK6-AS1 CDK6 antisense RNA 1 HGNC:40141 ENSG00000237819 . 101927497 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 3.719464176 knock down up-regulate 0.014859614 REG00012 CHRM3-AS1 CHRM3 antisense RNA 1 HGNC:40150 ENSG00000234601 . 100873984 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 COL18A1-AS2 COL18A1 antisense RNA 2 HGNC:40155 ENSG00000224574 . 100874236 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 COL4A2-AS1 COL4A2 antisense RNA 1 HGNC:40156 ENSG00000232814 . 100874203 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 VCAN-AS1 VCAN antisense RNA 1 HGNC:40163 ENSG00000249835 . 105379054 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 VCAN-AS1 VCAN antisense RNA 1 HGNC:40163 ENSG00000249835 . 105379054 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.773294337 knock down up-regulate 0.001627597 REG00012 VCAN-AS1 VCAN antisense RNA 1 HGNC:40163 ENSG00000249835 . 105379054 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.102012962 knock down up-regulate 8.53E-05 REG00012 CCN2-AS1 CCN2 antisense RNA 1 HGNC:40164 ENSG00000227220 . 122152366 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.607614137 knock down up-regulate 0.022894521 REG00012 CCN2-AS1 CCN2 antisense RNA 1 HGNC:40164 ENSG00000227220 . 122152366 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.634623335 knock down down-regulator 0.01286541 REG00012 CCN2-AS1 CCN2 antisense RNA 1 HGNC:40164 ENSG00000227220 . 122152366 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.614052885 knock down up-regulate 0.049688481 REG00012 CCN2-AS1 CCN2 antisense RNA 1 HGNC:40164 ENSG00000227220 . 122152366 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.155683088 knock down down-regulator 0.006774612 REG00012 CTD-2024I7.13 DIAPH1 antisense RNA 1 HGNC:40177 ENSG00000246422 . 100505658 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 LOC100505658 DIAPH1 antisense RNA 1 HGNC:40177 ENSG00000246422 . 100505658 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DLG3-AS1 DLG3 antisense RNA 1 HGNC:40182 ENSG00000231651 . 100873930 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DNMT3L-AS1 DNMT3L antisense RNA 1 HGNC:40189 ENSG00000232010 . 105372833 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.639272979 knock down down-regulator 0.005414428 REG00012 DNMT3L-AS1 DNMT3L antisense RNA 1 HGNC:40189 ENSG00000232010 . 105372833 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.067458097 knock down up-regulate 0.00029897 REG00012 DPP4-DT DPP4 divergent transcript HGNC:40191 ENSG00000230918 . 100131604 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.60566466 knock down down-regulator 0.001451467 REG00012 DYRK3-AS1 DYRK3 antisense RNA 1 HGNC:40199 ENSG00000237605 . 105372876 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.779843138 knock out up-regulate 0.049855119 REG00012 PHC2-AS1 PHC2 antisense RNA 1 HGNC:40205 ENSG00000233246 . 101929464 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.619855475 knock down down-regulator 0.011459003 REG00012 EGFR-AS1 EGFR antisense RNA 1 HGNC:40207 ENSG00000224057 . 100507500 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EGFR-AS1 EGFR antisense RNA 1 HGNC:40207 ENSG00000224057 . 100507500 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.036695725 knock down up-regulate 8.75E-05 REG00012 EGFR-AS1 EGFR antisense RNA 1 HGNC:40207 ENSG00000224057 . 100507500 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.72393158 knock down down-regulator 0.009619687 REG00012 ELF3-AS1 ELF3 antisense RNA 1 HGNC:40211 ENSG00000234678 . 102723465 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.034795842 knock out down-regulator 0.002367852 REG00012 ELF3-AS1 ELF3 antisense RNA 1 HGNC:40211 ENSG00000234678 . 102723465 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.058377651 knock down up-regulate 0.000601902 REG00012 ELF3-AS1 ELF3 antisense RNA 1 HGNC:40211 ENSG00000234678 . 102723465 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.962740684 knock down down-regulator 0.00024974 REG00012 ENO1-AS1 ENO1 antisense RNA 1 HGNC:40214 ENSG00000230679 . 100505975 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ERCC8-AS1 ERCC8 antisense RNA 1 HGNC:40220 ENSG00000233847 . 105378991 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.976842939 knock down up-regulate 0.019125292 REG00012 FLNB-AS1 FLNB antisense RNA 1 HGNC:40239 ENSG00000244161 . 105377105 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 FOXD3-AS1 FOXD3 antisense RNA 1 HGNC:40241 ENSG00000230798 . 100996301 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MTOR-AS1 MTOR antisense RNA 1 HGNC:40242 ENSG00000225602 . 100873935 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ALDH1L1-AS1 ALDH1L1 antisense RNA 1 HGNC:40244 ENSG00000250218 . 100874204 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GK-AS1 GK antisense RNA 1 HGNC:40255 ENSG00000243055 . 100873902 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.20568538 knock down up-regulate 0.015391471 REG00012 GK-AS1 GK antisense RNA 1 HGNC:40255 ENSG00000243055 . 100873902 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.141587837 knock down up-regulate 0.044414631 REG00012 GPR50-AS1 GPR50 antisense RNA 1 HGNC:40259 ENSG00000234696 . 100128688 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 GPR50-AS1 GPR50 antisense RNA 1 HGNC:40259 ENSG00000234696 . 100128688 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.599344526 knock down up-regulate 0.001831661 REG00012 GTF3C2-AS1 GTF3C2 antisense RNA 1 HGNC:40269 ENSG00000234945 . 100505624 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 H2AZ1-DT H2AZ1 divergent transcript HGNC:40271 ENSG00000245322 . 256880 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.680370103 knock out up-regulate 2.67E-13 REG00012 H2AZ1-DT H2AZ1 divergent transcript HGNC:40271 ENSG00000245322 . 256880 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.783426974 knock down down-regulator 3.88E-19 REG00012 HCFC1-AS1 HCFC1 antisense RNA 1 HGNC:40273 ENSG00000235802 . 100873990 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00525 Long intergenic non-protein coding RNA 525 HGNC:40290 ENSG00000146666 . 84847 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.395872887 knock down down-regulator 1.07E-07 REG00012 LINC00525 Long intergenic non-protein coding RNA 525 HGNC:40290 ENSG00000146666 . 84847 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.127322917 knock down up-regulate 6.64E-29 REG00012 LINC00525 Long intergenic non-protein coding RNA 525 HGNC:40290 ENSG00000146666 . 84847 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.634522721 knock down up-regulate 2.47E-09 REG00012 LINC00525 Long intergenic non-protein coding RNA 525 HGNC:40290 ENSG00000146666 . 84847 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.889595142 knock down up-regulate 6.47E-05 REG00012 LINC00525 Long intergenic non-protein coding RNA 525 HGNC:40290 ENSG00000146666 . 84847 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.089189532 knock down down-regulator 8.62E-13 REG00012 LINC00525 Long intergenic non-protein coding RNA 525 HGNC:40290 ENSG00000146666 . 84847 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.154571796 knock down down-regulator 1.03E-05 REG00012 IDH1-AS1 IDH1 antisense RNA 1 HGNC:40292 ENSG00000231908 . 100507475 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.835251186 knock down up-regulate 0.004548975 REG00012 IDH1-AS1 IDH1 antisense RNA 1 HGNC:40292 ENSG00000231908 . 100507475 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.612029123 knock down up-regulate 0.037050155 REG00012 IDH1-AS1 IDH1 antisense RNA 1 HGNC:40292 ENSG00000231908 . 100507475 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.507380212 knock down up-regulate 0.012239106 REG00012 IDH1-AS1 IDH1 antisense RNA 1 HGNC:40292 ENSG00000231908 . 100507475 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 2.248280347 knock down up-regulate 0.013444621 REG00012 IGBP1-AS2 IGBP1 antisense RNA 2 HGNC:40294 ENSG00000220925 . 106478965 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.394002695 knock down down-regulator 2.07E-08 REG00012 IGFBP7-AS1 IGFBP7 antisense RNA 1 HGNC:40296 ENSG00000245067 . 255130 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.757897507 knock out down-regulator 0.002925251 REG00012 IL20RB-AS1 IL20RB antisense RNA 1 HGNC:40298 ENSG00000249407 . 107986136 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.009736391 knock down down-regulator 0.001048781 REG00012 IL6-AS1 IL6 antisense RNA 1 HGNC:40301 ENSG00000179428 . 541472 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 2.169534005 knock down up-regulate 0.008140593 REG00012 JARID2-AS1 JARID2 antisense RNA 1 HGNC:40314 ENSG00000235488 . 100506681 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HCG2040054 MSH2 overlapping transcript 1 HGNC:40319 ENSG00000235760 . 644093 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MSH2-OT1 MSH2 overlapping transcript 1 HGNC:40319 ENSG00000235760 . 644093 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.630805085 knock down down-regulator 0.028570832 REG00012 MSH2-OT1 MSH2 overlapping transcript 1 HGNC:40319 ENSG00000235760 . 644093 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.596544466 knock down down-regulator 0.049785082 REG00012 LOC102724009 KIF1C antisense RNA 1 HGNC:40324 ENSG00000227495 . 102724009 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 KIF1C-AS1 KIF1C antisense RNA 1 HGNC:40324 ENSG00000227495 . 102724009 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.082706213 knock down down-regulator 1.11E-06 REG00012 KIF1C-AS1 KIF1C antisense RNA 1 HGNC:40324 ENSG00000227495 . 102724009 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.692811931 knock down up-regulate 1.39E-15 REG00012 LAMA5-AS1 LAMA5 antisense RNA 1 HGNC:40334 ENSG00000228812 . 101928158 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC100507600 LCT antisense RNA 1 HGNC:40337 ENSG00000226806 . 100507600 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LEF1-AS1 LEF1 antisense RNA 1 HGNC:40339 ENSG00000232021 . 641518 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LGALS8-AS1 LGALS8 antisense RNA 1 HGNC:40340 ENSG00000223776 . 100287902 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LHFPL3-AS1 LHFPL3 antisense RNA 1 HGNC:40341 ENSG00000226869 . 645591 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LNX1-AS1 LNX1 antisense RNA 1 HGNC:40345 ENSG00000250930 . 100873939 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LPP-AS1 LPP antisense RNA 1 HGNC:40346 ENSG00000224563 . 100873917 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC101928943 MADD antisense RNA 1 HGNC:40354 ENSG00000256746 . 101928943 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC101929064 MAPK10 antisense RNA 1 HGNC:40359 ENSG00000250062 . 101929064 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MELTF-AS1 MELTF antisense RNA 1 HGNC:40373 ENSG00000228109 . 100507057 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MKLN1-AS MKLN1 antisense RNA HGNC:40374 ENSG00000236753 . 100506881 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.112443666 knock down down-regulator 0.038038529 REG00012 MKLN1-AS MKLN1 antisense RNA HGNC:40374 ENSG00000236753 . 100506881 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.112443666 knock down down-regulator 0.038038529 REG00012 LOC102724094 MUC12 antisense RNA 1 HGNC:40382 ENSG00000227053 . 102724094 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MUC12-AS1 MUC12 antisense RNA 1 HGNC:40382 ENSG00000227053 . 102724094 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.943935846 knock down up-regulate 6.56E-05 REG00012 MUC12-AS1 MUC12 antisense RNA 1 HGNC:40382 ENSG00000227053 . 102724094 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.865860923 knock down down-regulator 0.009546661 REG00012 MUC12-AS1 MUC12 antisense RNA 1 HGNC:40382 ENSG00000227053 . 102724094 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.273245094 knock down down-regulator 0.000618248 REG00012 MUC12-AS1 MUC12 antisense RNA 1 HGNC:40382 ENSG00000227053 . 102724094 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.329351582 knock down down-regulator 0.020245596 REG00012 NCBP2-AS1 NCBP2 antisense RNA 1 HGNC:40392 ENSG00000225578 . 100874001 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.327751402 knock down up-regulate 7.95E-08 REG00012 NCBP2-AS1 NCBP2 antisense RNA 1 HGNC:40392 ENSG00000225578 . 100874001 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.935258145 knock down up-regulate 4.94E-06 REG00012 NDUFB2-AS1 NDUFB2 antisense RNA 1 HGNC:40396 ENSG00000240889 . 100134713 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NDUFB2-AS1 NDUFB2 antisense RNA 1 HGNC:40396 ENSG00000240889 . 100134713 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.620206498 knock down down-regulator 0.013734304 REG00012 NDUFB2-AS1 NDUFB2 antisense RNA 1 HGNC:40396 ENSG00000240889 . 100134713 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.771092823 knock down up-regulate 2.73E-05 REG00012 NFIA-AS1 NFIA antisense RNA 1 HGNC:40402 ENSG00000237853 . 645030 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FGD5-AS1 FGD5 antisense RNA 1 HGNC:40410 ENSG00000225733 . 100505641 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 FGD5-AS1 FGD5 antisense RNA 1 HGNC:40410 ENSG00000225733 . 100505641 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.972331539 knock down up-regulate 0.000805348 REG00012 FGD5-AS1 FGD5 antisense RNA 1 HGNC:40410 ENSG00000225733 . 100505641 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.732099111 knock down up-regulate 0.003060895 REG00012 NUCB1-AS1 NUCB1 antisense RNA 1 HGNC:40419 ENSG00000235191 . 100874085 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NUCB1-AS1 NUCB1 antisense RNA 1 HGNC:40419 ENSG00000235191 . 100874085 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.449252973 knock out down-regulator 3.49E-06 REG00012 OPA1-AS1 OPA1 antisense RNA 1 HGNC:40421 ENSG00000224855 . 100873941 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 OPA1-AS1 OPA1 antisense RNA 1 HGNC:40421 ENSG00000224855 . 100873941 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.743225295 knock down down-regulator 0.003055088 REG00012 OPA1-AS1 OPA1 antisense RNA 1 HGNC:40421 ENSG00000224855 . 100873941 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.693623013 knock down down-regulator 0.033636205 REG00012 LOC101929516 PABPC4 antisense RNA 1 HGNC:40424 ENSG00000228060 . 101929516 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC100505795 PBX1 antisense RNA 1 HGNC:40425 ENSG00000233693 . 100505795 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC100129027 PCBP3 antisense RNA 1 HGNC:40426 ENSG00000205424 . 100129027 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PCOLCE-AS1 PCOLCE antisense RNA 1 HGNC:40430 ENSG00000224729 . 100129845 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.898950408 knock down up-regulate 0.000423237 REG00012 PCOLCE-AS1 PCOLCE antisense RNA 1 HGNC:40430 ENSG00000224729 . 100129845 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.28316299 knock down down-regulator 1.92E-05 REG00012 PCOLCE-AS1 PCOLCE antisense RNA 1 HGNC:40430 ENSG00000224729 . 100129845 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.124782208 knock down down-regulator 3.32E-05 REG00012 LOC102724919 PDC antisense RNA 1 HGNC:40432 ENSG00000229739 . 102724919 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PLCG1-AS1 PLCG1 antisense RNA 1 HGNC:40450 ENSG00000226648 . 101927117 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.634904369 knock down down-regulator 0.027356635 REG00012 PLCG1-AS1 PLCG1 antisense RNA 1 HGNC:40450 ENSG00000226648 . 101927117 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.733959522 knock down down-regulator 0.011838722 REG00012 PLXNB3-AS1 PLXNB3 antisense RNA 1 HGNC:40454 ENSG00000232725 . 102723591 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.604213419 knock down down-regulator 2.94E-05 REG00012 PLXNB3-AS1 PLXNB3 antisense RNA 1 HGNC:40454 ENSG00000232725 . 102723591 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.909279572 knock out up-regulate 0.033084384 REG00012 PLXNB3-AS1 PLXNB3 antisense RNA 1 HGNC:40454 ENSG00000232725 . 102723591 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.632631239 knock down up-regulate 5.87E-06 REG00012 PLXNB3-AS1 PLXNB3 antisense RNA 1 HGNC:40454 ENSG00000232725 . 102723591 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.64944152 knock down up-regulate 0.000415386 REG00012 LOC105376736 EXOSC10 antisense RNA 1 HGNC:40456 ENSG00000230337 . 105376736 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EXOSC10-AS1 EXOSC10 antisense RNA 1 HGNC:40456 ENSG00000230337 . 105376736 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.589833657 knock down down-regulator 0.003244518 REG00012 PPIC-AS1 PPIC antisense RNA 1 HGNC:40464 ENSG00000249996 . 107986447 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.7749 knock down up-regulate 0.03866 REG00012 PPIC-AS1 PPIC antisense RNA 1 HGNC:40464 ENSG00000249996 . 107986447 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.6373 knock down down-regulator 0.04823 REG00012 PPIC-AS1 PPIC antisense RNA 1 HGNC:40464 ENSG00000249996 . 107986447 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.5915 knock down down-regulator 0.0007412 REG00012 PRKAG2-AS1 PRKAG2 antisense RNA 1 HGNC:40468 ENSG00000239911 . 100505483 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.85101265 knock down down-regulator 0.014148856 REG00012 LOC101927000 PRKAR1B antisense RNA 2 HGNC:40469 ENSG00000229380 . 101927000 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PRKAR1B-AS1 PRKAR1B antisense RNA 1 HGNC:40470 ENSG00000237181 . 101926963 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.21027624 knock down down-regulator 0.001152516 REG00012 PRKAR2A-AS1 PRKAR2A antisense RNA 1 HGNC:40471 ENSG00000224424 . 100506637 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PRKAR2A-AS1 PRKAR2A antisense RNA 1 HGNC:40471 ENSG00000224424 . 100506637 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.627493469 knock down down-regulator 0.010197018 REG00012 PRKAR2A-AS1 PRKAR2A antisense RNA 1 HGNC:40471 ENSG00000224424 . 100506637 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.71638043 knock down down-regulator 0.009071135 REG00012 PRKX-AS1 PRKX antisense RNA 1 HGNC:40479 ENSG00000236188 . 100873944 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC100506585 PTPRN2 antisense RNA 1 HGNC:40488 ENSG00000233038 . 100506585 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TH2LCRR T helper type 2 locus control region associated RNA HGNC:40495 ENSG00000223442 . 101927761 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RAI1-AS1 RAI1 antisense RNA 1 HGNC:40496 ENSG00000237328 . 100861516 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RASGRF2-AS1 RASGRF2 antisense RNA 1 HGNC:40499 ENSG00000251450 . 102524628 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GBAT2 RFX5 antisense RNA 1 HGNC:40503 ENSG00000237976 . 101927886 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RFX5-AS1 RFX5 antisense RNA 1 HGNC:40503 ENSG00000237976 . 101927886 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.701415686 knock out down-regulator 0.039918193 REG00012 RGS5-AS1 RGS5 antisense RNA 1 HGNC:40504 ENSG00000232892 . 101928404 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.784401041 knock down up-regulate 0.017293375 REG00012 ROR1-AS1 ROR1 antisense RNA 1 HGNC:40508 ENSG00000223949 . 101927034 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.130612267 knock down up-regulate 0.001073023 REG00012 RPL37A-DT RPL37A divergent transcript HGNC:40510 ENSG00000232485 . 100507554 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.352281409 knock down up-regulate 0.000189924 REG00012 RPS6KA2-AS1 RPS6KA2 antisense RNA 1 HGNC:40511 ENSG00000231654 . 100861523 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RUNX3-AS1 RUNX3 antisense RNA 1 HGNC:40513 ENSG00000229162 . 105376878 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.798577328 knock out up-regulate 0.001356752 REG00012 RUVBL1-AS1 RUVBL1 antisense RNA 1 HGNC:40514 ENSG00000239608 . 100874089 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ATXN1-AS1 ATXN1 antisense RNA 1 HGNC:40515 ENSG00000229931 . 101928433 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.095144485 knock down up-regulate 2.23E-06 REG00012 ATXN1-AS1 ATXN1 antisense RNA 1 HGNC:40515 ENSG00000229931 . 101928433 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.726540153 knock down down-regulator 6.85E-18 REG00012 ATXN1-AS1 ATXN1 antisense RNA 1 HGNC:40515 ENSG00000229931 . 101928433 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.794313914 knock down down-regulator 0.003946373 REG00012 SCTR-AS1 SCTR antisense RNA 1 HGNC:40516 ENSG00000231013 . 107105282 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.858125801 knock out down-regulator 0.012185102 REG00012 LOC101927051 PDXP divergent transcript HGNC:40525 ENSG00000233360 . 101927051 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SIAH2-AS1 SIAH2 antisense RNA 1 HGNC:40526 ENSG00000244265 . 105374155 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.271112433 knock down up-regulate 0.038911922 REG00012 SIAH2-AS1 SIAH2 antisense RNA 1 HGNC:40526 ENSG00000244265 . 105374155 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.261862657 knock down up-regulate 0.003062811 REG00012 SIAH2-AS1 SIAH2 antisense RNA 1 HGNC:40526 ENSG00000244265 . 105374155 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.833358159 knock down up-regulate 0.020091465 REG00012 KDM4A-AS1 KDM4A antisense RNA 1 HGNC:40528 ENSG00000236200 . 100132774 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 KDM4A-AS1 KDM4A antisense RNA 1 HGNC:40528 ENSG00000236200 . 100132774 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.851176899 knock down down-regulator 4.81E-15 REG00012 KDM4A-AS1 KDM4A antisense RNA 1 HGNC:40528 ENSG00000236200 . 100132774 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.62672792 knock down up-regulate 0.000216181 REG00012 PRMT5-AS1 PRMT5 antisense RNA 1 HGNC:40533 ENSG00000237054 . 100505758 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLCO4A1-AS1 SLCO4A1 antisense RNA 1 HGNC:40537 ENSG00000232803 . 100127888 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SLCO4A1-AS1 SLCO4A1 antisense RNA 1 HGNC:40537 ENSG00000232803 . 100127888 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.62439014 knock down down-regulator 0.024598236 REG00012 SLCO4A1-AS1 SLCO4A1 antisense RNA 1 HGNC:40537 ENSG00000232803 . 100127888 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.604140698 knock down down-regulator 6.73E-05 REG00012 LOC101929384 SLC6A12 antisense RNA 1 HGNC:40548 ENSG00000256577 . 101929384 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.607629478 knock down down-regulator 0.000155717 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.001585272 knock down up-regulate 0.00186833 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.626017312 knock down up-regulate 3.77E-06 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.699948863 knock down up-regulate 0.003816716 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.74891078 knock down down-regulator 0.000371222 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.690640686 knock down up-regulate 0.000488435 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.67567203 knock down down-regulator 0.002156824 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.051995802 knock down up-regulate 2.58E-05 REG00012 SLC9A3-AS1 SLC9A3 antisense RNA 1 HGNC:40550 ENSG00000225138 . 100288152 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.838742209 knock down down-regulator 0.000623209 REG00012 SLIT3-AS2 SLIT3 antisense RNA 2 HGNC:40551 ENSG00000254042 . 101927969 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.677553357 knock down down-regulator 0.000213037 REG00012 SLIT3-AS2 SLIT3 antisense RNA 2 HGNC:40551 ENSG00000254042 . 101927969 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.679211229 knock down up-regulate 0.000237248 REG00012 SLIT3-AS2 SLIT3 antisense RNA 2 HGNC:40551 ENSG00000254042 . 101927969 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.610321203 knock down down-regulator 0.003863293 REG00012 SMARCAL1-AS1 SMARCAL1 antisense RNA 1 HGNC:40555 ENSG00000235042 . 107985985 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.731320058 knock down down-regulator 0.00738483 REG00012 LINC01424 Long intergenic non-protein coding RNA 1424 HGNC:40558 ENSG00000236519 . 101928689 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SPTBN1-AS1 SPTBN1 antisense RNA 1 HGNC:40562 ENSG00000228108 . 105374640 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.660409385 knock down down-regulator 0.003637849 REG00012 SRI-AS1 SRI antisense RNA 1 HGNC:40564 ENSG00000254003 . 102723885 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.705145813 knock down down-regulator 0.011651175 REG00012 STIM1-AS1 STIM1 antisense RNA 1 HGNC:40568 ENSG00000228661 . 105376527 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.648957709 knock out up-regulate 0.002438878 REG00012 TAX1BP1-AS1 TAX1BP1 antisense RNA 1 HGNC:40576 ENSG00000229893 . 105375210 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.881386045 knock down up-regulate 0.003568681 REG00012 TAX1BP1-AS1 TAX1BP1 antisense RNA 1 HGNC:40576 ENSG00000229893 . 105375210 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.235495568 knock down down-regulator 0.036612282 REG00012 TDRKH-AS1 TDRKH antisense RNA 1 HGNC:40578 ENSG00000203288 . 109729141 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.513137667 knock down down-regulator 0.007149047 REG00012 TDRKH-AS1 TDRKH antisense RNA 1 HGNC:40578 ENSG00000203288 . 109729141 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.722799846 knock down up-regulate 0.02616455 REG00012 THBS3-AS1 THBS3 antisense RNA 1 HGNC:40582 ENSG00000231064 . 105371450 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.6155305 knock down up-regulate 0.03540071 REG00012 CTD-2201I18.1 THBS4 antisense RNA 1 HGNC:40583 ENSG00000249825 . 101929215 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TM4SF1-AS1 TM4SF1 antisense RNA 1 HGNC:40587 ENSG00000240541 . 100874091 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TM4SF1-AS1 TM4SF1 antisense RNA 1 HGNC:40587 ENSG00000240541 . 100874091 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -2.612041917 knock down down-regulator 9.04E-06 REG00012 TM4SF1-AS1 TM4SF1 antisense RNA 1 HGNC:40587 ENSG00000240541 . 100874091 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.324315806 knock down down-regulator 0.00072324 REG00012 TM4SF1-AS1 TM4SF1 antisense RNA 1 HGNC:40587 ENSG00000240541 . 100874091 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.131015471 knock down down-regulator 0.007831587 REG00012 TM4SF1-AS1 TM4SF1 antisense RNA 1 HGNC:40587 ENSG00000240541 . 100874091 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.52888601 knock down down-regulator 2.24E-05 REG00012 TTC3-AS1 TTC3 antisense RNA 1 HGNC:40595 ENSG00000228677 . 100874006 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 UGDH-AS1 UGDH antisense RNA 1 HGNC:40601 ENSG00000249348 . 100885776 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 UGDH-AS1 UGDH antisense RNA 1 HGNC:40601 ENSG00000249348 . 100885776 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.998755142 knock down down-regulator 1.17E-05 REG00012 UGDH-AS1 UGDH antisense RNA 1 HGNC:40601 ENSG00000249348 . 100885776 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.381258333 knock down up-regulate 1.52E-05 REG00012 UPK1A-AS1 UPK1A antisense RNA 1 HGNC:40603 ENSG00000226510 . 100862728 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.600309704 knock down down-regulator 0.001083006 REG00012 UPK1A-AS1 UPK1A antisense RNA 1 HGNC:40603 ENSG00000226510 . 100862728 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.818691464 knock down down-regulator 0.001831982 REG00012 EZR-AS1 EZR antisense RNA 1 HGNC:40609 ENSG00000233893 . 101409257 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.72090808 knock down up-regulate 0.009972753 REG00012 EZR-AS1 EZR antisense RNA 1 HGNC:40609 ENSG00000233893 . 101409257 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.699576764 knock down up-regulate 0.021989648 REG00012 VIPR1-AS1 VIPR1 antisense RNA 1 HGNC:40610 ENSG00000232354 . 100874007 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 WARS2-AS1 WARS2 antisense RNA 1 HGNC:40612 ENSG00000231365 . 101929147 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.58689399 knock down down-regulator 0.008485996 REG00012 WNT5A-AS1 WNT5A antisense RNA 1 HGNC:40616 ENSG00000244586 . 100874008 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.959478661 knock out up-regulate 0.000728997 REG00012 ZNF197-AS1 ZNF197 antisense RNA 1 HGNC:40620 ENSG00000233509 . 100874094 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ZNF232-AS1 ZNF232 antisense RNA 1 HGNC:40623 ENSG00000234327 . 101928000 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.807138233 knock down down-regulator 0.037774633 REG00012 ZNF232-AS1 ZNF232 antisense RNA 1 HGNC:40623 ENSG00000234327 . 101928000 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.81907228 knock down down-regulator 0.00437337 REG00012 ZNF232-AS1 ZNF232 antisense RNA 1 HGNC:40623 ENSG00000234327 . 101928000 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.001019692 knock down down-regulator 0.04143066 REG00012 ADAMTS9-AS1 ADAMTS9 antisense RNA 1 HGNC:40625 ENSG00000241158 . 101929335 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC105376671 LGR4 antisense RNA 1 HGNC:40629 ENSG00000254862 . 105376671 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SLC2A9-AS1 SLC2A9 antisense RNA 1 HGNC:40636 ENSG00000250413 . 105374476 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.074694302 knock down down-regulator 1.51E-05 REG00012 SLC2A9-AS1 SLC2A9 antisense RNA 1 HGNC:40636 ENSG00000250413 . 105374476 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.664983653 knock down down-regulator 9.79E-06 REG00012 ZBTB20-AS1 ZBTB20 antisense RNA 1 HGNC:40640 ENSG00000241560 . 100131117 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ATP11A-AS1 ATP11A antisense RNA 1 HGNC:40645 ENSG00000232684 . 100874205 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NLGN1-AS1 NLGN1 antisense RNA 1 HGNC:40676 ENSG00000228213 . 100874010 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC101927257 MRTFA antisense RNA 1 HGNC:40681 ENSG00000232564 . 101927257 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RASGRP3-AS1 RASGRP3 antisense RNA 1 HGNC:40689 ENSG00000237133 . 105374454 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.287558934 knock down down-regulator 0.006893118 REG00012 RASGRP3-AS1 RASGRP3 antisense RNA 1 HGNC:40689 ENSG00000237133 . 105374454 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.112141904 knock down down-regulator 0.011689169 REG00012 RASGRP3-AS1 RASGRP3 antisense RNA 1 HGNC:40689 ENSG00000237133 . 105374454 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.629119995 knock down down-regulator 0.029539093 REG00012 PRPF31-AS1 PRPF31 antisense RNA 1 HGNC:40700 ENSG00000237017 . 121832802 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.797459613 knock down down-regulator 0.016807469 REG00012 PRPF31-AS1 PRPF31 antisense RNA 1 HGNC:40700 ENSG00000237017 . 121832802 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.78988819 knock down down-regulator 0.000929964 REG00012 LENG8-AS1 LENG8 antisense RNA 1 HGNC:40705 ENSG00000226696 . 104355426 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 UBE2Q1-AS1 UBE2Q1 antisense RNA 1 HGNC:40722 ENSG00000229780 . 100874097 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 UBE2Q1-AS1 UBE2Q1 antisense RNA 1 HGNC:40722 ENSG00000229780 . 100874097 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.817184104 knock down down-regulator 0.000662086 REG00012 UBE2Q1-AS1 UBE2Q1 antisense RNA 1 HGNC:40722 ENSG00000229780 . 100874097 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.706148103 knock down up-regulate 0.005059715 REG00012 OGFR-AS1 OGFR antisense RNA 1 HGNC:40724 ENSG00000229873 . 101409261 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 OGFR-AS1 OGFR antisense RNA 1 HGNC:40724 ENSG00000229873 . 101409261 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.122116284 knock down down-regulator 5.64E-05 REG00012 OGFR-AS1 OGFR antisense RNA 1 HGNC:40724 ENSG00000229873 . 101409261 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.03314502 knock down down-regulator 0.001274702 REG00012 LMLN-AS1 LMLN antisense RNA 1 HGNC:40738 ENSG00000232832 . 100873947 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NAV2-AS2 NAV2 antisense RNA 2 HGNC:40743 ENSG00000254453 . 100874014 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ZBTB46-AS2 ZBTB46 antisense RNA 2 HGNC:40752 ENSG00000229299 . 122152329 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.978429957 knock down up-regulate 0.004332117 REG00012 ZBTB46-AS2 ZBTB46 antisense RNA 2 HGNC:40752 ENSG00000229299 . 122152329 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.290842911 knock down down-regulator 1.40E-14 REG00012 ZBTB46-AS2 ZBTB46 antisense RNA 2 HGNC:40752 ENSG00000229299 . 122152329 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.676558529 knock down up-regulate 0.022860856 REG00012 ZBTB46-AS2 ZBTB46 antisense RNA 2 HGNC:40752 ENSG00000229299 . 122152329 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.271399968 knock down up-regulate 3.63E-13 REG00012 ZBTB46-AS1 ZBTB46 antisense RNA 1 HGNC:40753 ENSG00000231208 . 101928604 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC101929526 DTD1 antisense RNA 1 HGNC:40762 ENSG00000233993 . 101929526 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 OSBPL10-AS1 OSBPL10 antisense RNA 1 HGNC:40767 ENSG00000232490 . 100874206 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LARS2-AS1 LARS2 antisense RNA 1 HGNC:40796 ENSG00000232455 . 100885795 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 UST-AS2 UST antisense RNA 2 HGNC:40803 ENSG00000236591 . 105378047 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.634386971 knock down down-regulator 0.000986526 REG00012 UST-AS2 UST antisense RNA 2 HGNC:40803 ENSG00000236591 . 105378047 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.665980961 knock down up-regulate 0.046482463 REG00012 UST-AS2 UST antisense RNA 2 HGNC:40803 ENSG00000236591 . 105378047 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.87171622 knock down down-regulator 0.017926278 REG00012 UST-AS2 UST antisense RNA 2 HGNC:40803 ENSG00000236591 . 105378047 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.702083728 knock down down-regulator 0.047309437 REG00012 UST-AS2 UST antisense RNA 2 HGNC:40803 ENSG00000236591 . 105378047 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.311526664 knock down down-regulator 0.000377464 REG00012 CADM3-AS1 CADM3 antisense RNA 1 HGNC:40812 ENSG00000225670 . 100131825 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PVRL3-AS1 NECTIN3 antisense RNA 1 HGNC:40813 ENSG00000242242 . 100506555 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC100506142 RHOQ antisense RNA 1 HGNC:40816 ENSG00000250116 . 100506142 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LAMTOR5-AS1 LAMTOR5 antisense RNA 1 HGNC:40823 ENSG00000224699 . 101410535 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LAMTOR5-AS1 LAMTOR5 antisense RNA 1 HGNC:40823 ENSG00000224699 . 101410535 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.592110896 knock down up-regulate 2.61E-05 REG00012 LAMTOR5-AS1 LAMTOR5 antisense RNA 1 HGNC:40823 ENSG00000224699 . 101410535 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.149381108 knock down up-regulate 1.55E-54 REG00012 LAMTOR5-AS1 LAMTOR5 antisense RNA 1 HGNC:40823 ENSG00000224699 . 101410535 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.797104434 knock down up-regulate 2.04E-11 REG00012 STARD7-AS1 STARD7 antisense RNA 1 HGNC:40827 ENSG00000204685 . 285033 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ST3GAL6-AS1 ST3GAL6 antisense RNA 1 HGNC:40828 ENSG00000239445 . 100874207 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.757746925 knock down down-regulator 0.012146611 REG00012 LOC100505635 DAAM2 antisense RNA 1 HGNC:40830 ENSG00000235033 . 100505635 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SEC61G-DT SEC61G divergent transcript HGNC:40835 ENSG00000234707 . 100996654 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.712790719 knock down up-regulate 0.019922652 REG00012 SEC61G-DT SEC61G divergent transcript HGNC:40835 ENSG00000234707 . 100996654 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.819906308 knock down down-regulator 0.004056844 REG00012 LOC101927795 BZW1 antisense RNA 1 HGNC:40839 ENSG00000230408 . 101927795 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 BZW1-AS1 BZW1 antisense RNA 1 HGNC:40839 ENSG00000230408 . 101927795 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.643408719 knock down down-regulator 1.77E-05 REG00012 BZW1-AS1 BZW1 antisense RNA 1 HGNC:40839 ENSG00000230408 . 101927795 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 3.79701972 knock down up-regulate 2.35E-09 REG00012 NDFIP2-AS1 NDFIP2 antisense RNA 1 HGNC:40844 ENSG00000232132 . 100874208 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 KMT2E-AS1 KMT2E antisense RNA 1 HGNC:40845 ENSG00000239569 . 100216545 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 KMT2E-AS1 KMT2E antisense RNA 1 HGNC:40845 ENSG00000239569 . 100216545 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.853885591 knock down down-regulator 2.90E-11 REG00012 MAGI2-AS2 MAGI2 antisense RNA 2 HGNC:40861 ENSG00000226978 . 100874021 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MAGI2-AS3 MAGI2 antisense RNA 3 HGNC:40862 ENSG00000234456 . 100505881 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MAGI2-AS3 MAGI2 antisense RNA 3 HGNC:40862 ENSG00000234456 . 100505881 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.777683522 knock down up-regulate 0.000125943 REG00012 MAGI2-AS3 MAGI2 antisense RNA 3 HGNC:40862 ENSG00000234456 . 100505881 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.681325426 knock down up-regulate 0.000122214 REG00012 MAGI2-AS3 MAGI2 antisense RNA 3 HGNC:40862 ENSG00000234456 . 100505881 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.074937923 knock down up-regulate 0.000142372 REG00012 MAGI2-AS3 MAGI2 antisense RNA 3 HGNC:40862 ENSG00000234456 . 100505881 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.697711445 knock down down-regulator 0.007639656 REG00012 MAGI2-AS3 MAGI2 antisense RNA 3 HGNC:40862 ENSG00000234456 . 100505881 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.208958682 knock down down-regulator 0.000192762 REG00012 MAGI2-AS3 MAGI2 antisense RNA 3 HGNC:40862 ENSG00000234456 . 100505881 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.673617715 knock down up-regulate 2.12E-05 REG00012 MAST4-AS1 MAST4 antisense RNA 1 HGNC:40865 ENSG00000229666 . 101928794 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.950501571 knock down up-regulate 0.000242195 REG00012 MAST4-AS1 MAST4 antisense RNA 1 HGNC:40865 ENSG00000229666 . 101928794 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -5.548771016 knock down down-regulator 0.033574047 REG00012 MAST4-AS1 MAST4 antisense RNA 1 HGNC:40865 ENSG00000229666 . 101928794 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.777838777 knock down up-regulate 1.10E-13 REG00012 MAST4-AS1 MAST4 antisense RNA 1 HGNC:40865 ENSG00000229666 . 101928794 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.68895628 knock down down-regulator 0.000222239 REG00012 MAST4-AS1 MAST4 antisense RNA 1 HGNC:40865 ENSG00000229666 . 101928794 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.597038122 knock down down-regulator 2.46E-06 REG00012 STARD13-AS STARD13 antisense RNA HGNC:40873 ENSG00000236581 . 100874241 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DOCK4-AS1 DOCK4 antisense RNA 1 HGNC:40876 ENSG00000225572 . 100506413 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC101927907 LRRTM4 antisense RNA 1 HGNC:40889 ENSG00000234653 . 101927907 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.875655788 knock down up-regulate 0.003493936 REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.875655788 knock down up-regulate 0.003493936 REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.875655788 knock down up-regulate 0.003493936 REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.875655788 knock down up-regulate 0.003493936 REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.875655788 knock down up-regulate 0.003493936 REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.201271966 knock down up-regulate 0.000378664 REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.023382163 knock down up-regulate 1.06E-05 REG00012 ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 HGNC:40895 ENSG00000237781 . 100289061 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.023382163 knock down up-regulate 1.06E-05 REG00012 SRGAP3-AS3 SRGAP3 antisense RNA 3 HGNC:40900 ENSG00000227929 . 100288831 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC101928445 RUFY1 antisense RNA 1 HGNC:40903 ENSG00000244945 . 101928445 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MTUS2-AS1 MTUS2 antisense RNA 1 HGNC:40924 ENSG00000179141 . 100874107 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MID1IP1-AS1 MID1IP1 antisense RNA 1 HGNC:40932 ENSG00000238123 . 100874211 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 KLC2-AS1 KLC2 antisense RNA 1 HGNC:40934 ENSG00000254855 . 105369352 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.819985647 knock down up-regulate 8.99E-11 REG00012 KLC2-AS1 KLC2 antisense RNA 1 HGNC:40934 ENSG00000254855 . 105369352 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.69677124 knock down down-regulator 1.67E-09 REG00012 TRPC7-AS1 TRPC7 antisense RNA 1 HGNC:40936 ENSG00000248211 . 100874024 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 2.464752771 knock down up-regulate 0.000199618 REG00012 TRPC7-AS1 TRPC7 antisense RNA 1 HGNC:40936 ENSG00000248211 . 100874024 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -2.300251235 knock down down-regulator 6.70E-05 REG00012 NHSL1-AS1 NHSL1 antisense RNA 1 HGNC:40947 ENSG00000225177 . 441172 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.997957246 knock down up-regulate 3.82E-05 REG00012 NHSL1-AS1 NHSL1 antisense RNA 1 HGNC:40947 ENSG00000225177 . 441172 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.943788656 knock down up-regulate 1.26E-05 REG00012 NHSL1-AS1 NHSL1 antisense RNA 1 HGNC:40947 ENSG00000225177 . 441172 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.658217068 knock down down-regulator 7.15E-05 REG00012 FAM135A-AS1 FAM135A antisense RNA 1 HGNC:40955 ENSG00000224349 . 105377849 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.077540071 knock out up-regulate 0.007366518 REG00012 FAM135A-AS1 FAM135A antisense RNA 1 HGNC:40955 ENSG00000224349 . 105377849 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.755074918 knock down down-regulator 0.013678955 REG00012 FAM135A-AS1 FAM135A antisense RNA 1 HGNC:40955 ENSG00000224349 . 105377849 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.605543596 knock down up-regulate 0.005003236 REG00012 FAM135A-AS1 FAM135A antisense RNA 1 HGNC:40955 ENSG00000224349 . 105377849 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.590336162 knock down down-regulator 0.004823077 REG00012 BTBD9-AS1 BTBD9 antisense RNA 1 HGNC:40959 ENSG00000226533 . 101929425 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SCAT8 S-phase cancer associated transcript 8 HGNC:40967 ENSG00000236345 . 112935969 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.918206992 knock down down-regulator 8.52E-05 REG00012 SCAT8 S-phase cancer associated transcript 8 HGNC:40967 ENSG00000236345 . 112935969 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.053894854 knock down down-regulator 0.003589511 REG00012 SCAT8 S-phase cancer associated transcript 8 HGNC:40967 ENSG00000236345 . 112935969 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.72203262 knock down down-regulator 0.00624879 REG00012 SCAT8 S-phase cancer associated transcript 8 HGNC:40967 ENSG00000236345 . 112935969 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.177445655 knock down down-regulator 0.002157401 REG00012 FSIP2-AS1 FSIP2 antisense RNA 1 HGNC:40978 ENSG00000231646 . 107985781 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.016055238 knock down down-regulator 0.0326456 REG00012 FSIP2-AS1 FSIP2 antisense RNA 1 HGNC:40978 ENSG00000231646 . 107985781 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.781830091 knock down up-regulate 0.01425624 REG00012 FSIP2-AS1 FSIP2 antisense RNA 1 HGNC:40978 ENSG00000231646 . 107985781 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.879442175 knock down up-regulate 4.49E-07 REG00012 FSIP2-AS1 FSIP2 antisense RNA 1 HGNC:40978 ENSG00000231646 . 107985781 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.70772629 knock down up-regulate 2.19E-06 REG00012 POU6F2-AS1 POU6F2 antisense RNA 1 HGNC:40979 ENSG00000224122 . 100861520 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 POU6F2-AS1 POU6F2 antisense RNA 1 HGNC:40979 ENSG00000224122 . 100861520 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.151 knock down up-regulate 8.14E-05 REG00012 POU6F2-AS1 POU6F2 antisense RNA 1 HGNC:40979 ENSG00000224122 . 100861520 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.6931 knock down down-regulator 0.04798 REG00012 FEZF1-AS1 FEZF1 antisense RNA 1 HGNC:41001 ENSG00000230316 . 154860 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 THAP7-AS1 THAP7 antisense RNA 1 HGNC:41013 ENSG00000230513 . 439931 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 THAP7-AS1 THAP7 antisense RNA 1 HGNC:41013 ENSG00000230513 . 439931 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.077529026 knock down up-regulate 0.013273274 REG00012 THAP7-AS1 THAP7 antisense RNA 1 HGNC:41013 ENSG00000230513 . 439931 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.897389081 knock down up-regulate 0.013607427 REG00012 THAP7-AS1 THAP7 antisense RNA 1 HGNC:41013 ENSG00000230513 . 439931 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.649227478 knock down up-regulate 0.000444163 REG00012 MYCBP2-AS1 MYCBP2 antisense RNA 1 HGNC:41023 ENSG00000236051 . 100874212 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TIPARP-AS1 TIPARP antisense RNA 1 HGNC:41028 ENSG00000243926 . 100287227 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.209211 knock down up-regulate 0.00139892 REG00012 TIPARP-AS1 TIPARP antisense RNA 1 HGNC:41028 ENSG00000243926 . 100287227 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.971437226 knock down up-regulate 1.37E-06 REG00012 DNAJB8-AS1 DNAJB8 antisense RNA 1 HGNC:41029 ENSG00000242049 . 285224 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DNAJB8-AS1 DNAJB8 antisense RNA 1 HGNC:41029 ENSG00000242049 . 285224 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.116737815 knock down down-regulator 0.023521481 REG00012 WWC2-AS1 WWC2 antisense RNA 1 HGNC:41041 ENSG00000251128 . 101928734 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GLYCTK-AS1 GLYCTK antisense RNA 1 HGNC:41043 ENSG00000242797 . 100874110 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC100507388 PARM1 antisense RNA 1 HGNC:41051 ENSG00000249717 . 100507388 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 STEAP3-AS1 STEAP3 antisense RNA 1 HGNC:41053 ENSG00000229867 . 100874111 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TPRG1-AS2 TPRG1 antisense RNA 2 HGNC:41062 ENSG00000230115 . 100874027 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -4.476579151 knock down down-regulator 1.29E-05 REG00012 C3orf67-AS1 CFAP20DC antisense RNA 1 HGNC:41063 ENSG00000242428 . 101929238 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC654841 MFF divergent transcript HGNC:41067 ENSG00000236432 . 654841 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PIK3IP1-AS1 PIK3IP1 divergent transcript HGNC:41072 ENSG00000228839 . 101929760 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CATIP-AS1 CATIP antisense RNA 1 HGNC:41080 ENSG00000225062 . 101928513 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.62216735 knock down up-regulate 0.000457542 REG00012 CATIP-AS1 CATIP antisense RNA 1 HGNC:41080 ENSG00000225062 . 101928513 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.671675573 knock down up-regulate 0.001600499 REG00012 SGO1-AS1 SGO1 antisense RNA 1 HGNC:41081 ENSG00000231304 . 100874028 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TMEM44-AS2 TMEM44 antisense RNA 2 HGNC:41082 ENSG00000229334 . 122152323 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.33384615 knock down down-regulator 0.000472302 REG00012 TMEM44-AS2 TMEM44 antisense RNA 2 HGNC:41082 ENSG00000229334 . 122152323 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.158166265 knock down down-regulator 0.001484183 REG00012 TM4SF19-AS1 TM4SF19 antisense RNA 1 HGNC:41085 ENSG00000235897 . 100874214 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.996397417 knock down down-regulator 1.95E-06 REG00012 TM4SF19-AS1 TM4SF19 antisense RNA 1 HGNC:41085 ENSG00000235897 . 100874214 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.911232081 knock down down-regulator 1.94E-05 REG00012 LOC101929231 MMADHC divergent transcript HGNC:41087 ENSG00000231969 . 101929231 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC102724659 C1orf167 antisense RNA 1 HGNC:41091 ENSG00000177553 . 102724659 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC101928809 SDAD1 antisense RNA 1 HGNC:41106 ENSG00000245928 . 101928809 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC101929441 estrogen receptor responsive lncRNA 1 HGNC:41109 ENSG00000230550 . 101929441 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TTC21B-AS1 TTC21B antisense RNA 1 HGNC:41115 ENSG00000224490 . 100506134 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GRHL3-AS1 GRHL3 antisense RNA 1 HGNC:41119 ENSG00000232298 . 105376871 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.686658324 knock down down-regulator 1.26E-19 REG00012 TET2-AS1 TET2 antisense RNA 1 HGNC:41125 ENSG00000251586 . 104384744 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 IQCA1-AS1 IQCA1 antisense RNA 1 HGNC:41137 ENSG00000232893 . 107080627 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.939615849 knock out up-regulate 4.73E-06 REG00012 KANSL1L-AS1 KANSL1L antisense RNA 1 HGNC:41139 ENSG00000229127 . 101928020 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.90779591 knock down down-regulator 4.38E-21 REG00012 PRRT3-AS1 PRRT3 antisense RNA 1 HGNC:41151 ENSG00000230082 . 100874032 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PRRT3-AS1 PRRT3 antisense RNA 1 HGNC:41151 ENSG00000230082 . 100874032 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.01591295 knock down down-regulator 0.001937989 REG00012 PRRT3-AS1 PRRT3 antisense RNA 1 HGNC:41151 ENSG00000230082 . 100874032 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.59720874 knock down down-regulator 0.028653644 REG00012 XXYLT1-AS1 XXYLT1 antisense RNA 1 HGNC:41153 ENSG00000233303 . 100874528 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 XXYLT1-AS2 XXYLT1 antisense RNA 2 HGNC:41154 ENSG00000230266 . 101410543 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CNIH3-AS2 CNIH3 antisense RNA 2 HGNC:41162 ENSG00000233384 . 102723817 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.874920192 knock out up-regulate 0.001990543 REG00012 KIAA2012-AS1 KIAA2012 antisense RNA 1 HGNC:41164 ENSG00000222035 . 729224 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -2.020286254 knock down down-regulator 2.96E-85 REG00012 KIAA2012-AS1 KIAA2012 antisense RNA 1 HGNC:41164 ENSG00000222035 . 729224 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.513217864 knock down up-regulate 1.98E-83 REG00012 SPIN4-AS1 SPIN4 antisense RNA 1 HGNC:41177 ENSG00000233661 . 100874033 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.811505489 knock down down-regulator 0.004756525 REG00012 WDR86-AS1 WDR86 antisense RNA 1 HGNC:41186 ENSG00000243836 . 100131176 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ZFAND2A-DT ZFAND2A divergent transcript HGNC:41187 ENSG00000229043 . 101927021 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.692433598 knock down up-regulate 2.55E-05 REG00012 ZFAND2A-DT ZFAND2A divergent transcript HGNC:41187 ENSG00000229043 . 101927021 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.737987497 knock down up-regulate 2.23E-07 REG00012 PPP1R35-AS1 PPP1R35 antisense RNA 1 HGNC:41194 ENSG00000240211 . 101927632 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.6486 knock down up-regulate 0.000291 REG00012 PPP1R35-AS1 PPP1R35 antisense RNA 1 HGNC:41194 ENSG00000240211 . 101927632 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.094 knock down up-regulate 0.0006523 REG00012 PPP1R35-AS1 PPP1R35 antisense RNA 1 HGNC:41194 ENSG00000240211 . 101927632 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.8224 knock down up-regulate 0.002011 REG00012 ERICH6-AS1 ERICH6 antisense RNA 1 HGNC:41205 ENSG00000240137 . 101928085 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.723136016 knock down down-regulator 0.019733752 REG00012 ERICH6-AS1 ERICH6 antisense RNA 1 HGNC:41205 ENSG00000240137 . 101928085 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.713814809 knock down down-regulator 0.000879034 REG00012 ERICH6-AS1 ERICH6 antisense RNA 1 HGNC:41205 ENSG00000240137 . 101928085 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.799629863 knock down down-regulator 8.95E-05 REG00012 ERICH6-AS1 ERICH6 antisense RNA 1 HGNC:41205 ENSG00000240137 . 101928085 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.011148081 knock down down-regulator 0.013314315 REG00012 LOC102723727 LPGAT1 antisense RNA 1 HGNC:41221 ENSG00000229258 . 102723727 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC100128531 KIAA1671 antisense RNA 1 HGNC:41238 ENSG00000203280 . 100128531 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PEX5L-AS2 PEX5L antisense RNA 2 HGNC:41252 ENSG00000244302 . 101928790 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PEX5L-AS2 PEX5L antisense RNA 2 HGNC:41252 ENSG00000244302 . 101928790 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.380966661 knock down down-regulator 4.43E-05 REG00012 SNRK-AS1 SNRK antisense RNA 1 HGNC:41269 ENSG00000234617 . 100873954 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNRK-AS1 SNRK antisense RNA 1 HGNC:41269 ENSG00000234617 . 100873954 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.203180852 knock down down-regulator 0.005313946 REG00012 SNRK-AS1 SNRK antisense RNA 1 HGNC:41269 ENSG00000234617 . 100873954 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.731329222 knock down down-regulator 0.040068544 REG00012 SNRK-AS1 SNRK antisense RNA 1 HGNC:41269 ENSG00000234617 . 100873954 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.922103284 knock down down-regulator 0.005287215 REG00012 RNF207-AS1 RNF207 antisense RNA 1 HGNC:41286 ENSG00000226944 . 102724450 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.684955279 knock down up-regulate 0.006552092 REG00012 RNF207-AS1 RNF207 antisense RNA 1 HGNC:41286 ENSG00000226944 . 102724450 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.787760105 knock down up-regulate 6.74E-05 REG00012 LINC02863 Long intergenic non-protein coding RNA 2863 HGNC:41290 ENSG00000238160 . 102723741 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.957483228 knock down down-regulator 2.58E-42 REG00012 LINC02863 Long intergenic non-protein coding RNA 2863 HGNC:41290 ENSG00000238160 . 102723741 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.753095215 knock down up-regulate 0.048784473 REG00012 ARHGEF35-AS1 ARHGEF35 antisense RNA 1 HGNC:41292 ENSG00000244198 . 101928605 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.599199501 knock down down-regulator 0.006917759 REG00012 ARHGEF35-AS1 ARHGEF35 antisense RNA 1 HGNC:41292 ENSG00000244198 . 101928605 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.586145706 knock down down-regulator 0.00126431 REG00012 SMIM15-AS1 SMIM15 antisense RNA 1 HGNC:41293 ENSG00000251279 . 101928630 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ALMS1-IT1 ALMS1 intronic transcript 1 HGNC:41305 ENSG00000230002 . 100874291 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ALMS1-IT1 ALMS1 intronic transcript 1 HGNC:41305 ENSG00000230002 . 100874291 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.316796065 knock down down-regulator 5.17E-10 REG00012 DISC1-IT1 DISC1 intronic transcript 1 HGNC:41325 ENSG00000226758 . 104472714 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 E2F3-IT1 E2F3 intronic transcript 1 HGNC:41329 ENSG00000224707 . 100874268 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.677460757 knock down down-regulator 0.005941441 REG00012 E2F3-IT1 E2F3 intronic transcript 1 HGNC:41329 ENSG00000224707 . 100874268 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.618432627 knock down down-regulator 0.015264481 REG00012 E2F3-IT1 E2F3 intronic transcript 1 HGNC:41329 ENSG00000224707 . 100874268 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.935636849 knock down up-regulate 0.031405361 REG00012 E2F3-IT1 E2F3 intronic transcript 1 HGNC:41329 ENSG00000224707 . 100874268 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.745077185 knock down up-regulate 0.003519624 REG00012 ENO1-IT1 ENO1 intronic transcript 1 HGNC:41331 ENSG00000236269 . 106480431 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.993878281 knock down down-regulator 0.002175666 REG00012 ENO1-IT1 ENO1 intronic transcript 1 HGNC:41331 ENSG00000236269 . 106480431 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.793498155 knock down down-regulator 0.000365813 REG00012 FMR1-IT1 FMR1 intronic transcript 1 HGNC:41333 ENSG00000236337 . 106478973 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -2.036617972 knock down down-regulator 4.12E-17 REG00012 FMR1-IT1 FMR1 intronic transcript 1 HGNC:41333 ENSG00000236337 . 106478973 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.835473953 knock down up-regulate 6.93E-06 REG00012 GK-IT1 GK intronic transcript 1 HGNC:41339 ENSG00000229331 . 106480740 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.731055395 knock down up-regulate 0.00621873 REG00012 GPC5-IT1 GPC5 intronic transcript 1 HGNC:41340 ENSG00000236240 . 100874293 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.893045099 knock down down-regulator 0.045555645 REG00012 HLCS-IT1 HLCS intronic transcript 1 HGNC:41343 ENSG00000237646 . 100874294 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.628256137 knock down up-regulate 0.00937251 REG00012 HLCS-IT1 HLCS intronic transcript 1 HGNC:41343 ENSG00000237646 . 100874294 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 4.676376504 knock down up-regulate 0.012518434 REG00012 ITPKB-IT1 ITPKB intronic transcript 1 HGNC:41349 ENSG00000228382 . 100506443 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 KCNH1-IT1 KCNH1 intronic transcript 1 HGNC:41351 ENSG00000234233 . 100874296 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.639562634 knock down up-regulate 1.69E-08 REG00012 KCNQ5-IT1 KCNQ5 intronic transcript 1 HGNC:41354 ENSG00000233844 . 100507381 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.00361352 knock down down-regulator 4.31E-05 REG00012 KCNQ5-IT1 KCNQ5 intronic transcript 1 HGNC:41354 ENSG00000233844 . 100507381 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.641286182 knock down up-regulate 9.49E-15 REG00012 ST6GAL2-IT1 ST6GAL2 intronic transcript 1 HGNC:41380 ENSG00000238250 . 100874354 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.819188106 knock down down-regulator 0.005039928 REG00012 ST6GAL2-IT1 ST6GAL2 intronic transcript 1 HGNC:41380 ENSG00000238250 . 100874354 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.740417184 knock down down-regulator 0.009868744 REG00012 SLIT2-IT1 SLIT2 intronic transcript 1 HGNC:41383 ENSG00000248228 . 100505893 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.47E+00 . . . REG00012 SLIT2-IT1 SLIT2 intronic transcript 1 HGNC:41383 ENSG00000248228 . 100505893 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.980559845 knock down down-regulator 1.18E-06 REG00012 SLIT2-IT1 SLIT2 intronic transcript 1 HGNC:41383 ENSG00000248228 . 100505893 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.592758639 knock down up-regulate 0.042125105 REG00012 SLIT2-IT1 SLIT2 intronic transcript 1 HGNC:41383 ENSG00000248228 . 100505893 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.73836333 knock down down-regulator 1.24E-05 REG00012 SLIT2-IT1 SLIT2 intronic transcript 1 HGNC:41383 ENSG00000248228 . 100505893 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.631169968 knock down down-regulator 0.016338721 REG00012 SOS1-IT1 SOS1 intronic transcript 1 HGNC:41385 ENSG00000229692 . 100505911 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.632128599 knock down down-regulator 0.019593942 REG00012 SYNJ2-IT1 SYNJ2 intronic transcript 1 HGNC:41387 ENSG00000233496 . 100874300 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TCF7L1-IT1 TCF7L1 intronic transcript 1 HGNC:41388 ENSG00000231134 . 100874334 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.449408676 knock down down-regulator 0.039320064 REG00012 TCF7L1-IT1 TCF7L1 intronic transcript 1 HGNC:41388 ENSG00000231134 . 100874334 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.732934792 knock down up-regulate 0.002631208 REG00012 TGFA-IT1 TGFA intronic transcript 1 HGNC:41389 ENSG00000224606 . 100874273 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 WARS2-IT1 WARS2 intronic transcript 1 HGNC:41393 ENSG00000224238 . 104472716 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ITCH-IT1 ITCH intronic transcript 1 HGNC:41397 ENSG00000231795 . 100874302 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.545668863 knock down up-regulate 2.63E-05 REG00012 ARHGEF9-IT1 ARHGEF9 intronic transcript 1 HGNC:41401 ENSG00000231729 . 100874355 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ALG9-IT1 ALG9 intronic transcript 1 HGNC:41409 ENSG00000254450 . 100874303 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.803256484 knock down up-regulate 5.14E-07 REG00012 ALG9-IT1 ALG9 intronic transcript 1 HGNC:41409 ENSG00000254450 . 100874303 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 3.888963038 knock down up-regulate 0.002342476 REG00012 PLCB1-IT1 PLCB1 intronic transcript 1 HGNC:41414 ENSG00000225479 . 100874337 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ZNF346-IT1 ZNF346 intronic transcript 1 HGNC:41423 ENSG00000251666 . 106480741 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.946678764 knock out down-regulator 0.028122395 REG00012 ZNF346-IT1 ZNF346 intronic transcript 1 HGNC:41423 ENSG00000251666 . 106480741 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.286135698 knock down up-regulate 0.014810779 REG00012 ZNF346-IT1 ZNF346 intronic transcript 1 HGNC:41423 ENSG00000251666 . 106480741 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.310714247 knock down down-regulator 0.006795968 REG00012 HM13-IT1 HM13 intronic transcript 1 HGNC:41424 ENSG00000235313 . 106480432 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.768794726 knock down down-regulator 0.008175863 REG00012 HM13-IT1 HM13 intronic transcript 1 HGNC:41424 ENSG00000235313 . 106480432 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.774233132 knock down down-regulator 0.027315238 REG00012 ACAP2-IT1 ACAP2 intronic transcript 1 HGNC:41426 ENSG00000229325 . 100874306 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.365562358 knock down up-regulate 0.00032031 REG00012 AGAP1-IT1 AGAP1 intronic transcript 1 HGNC:41427 ENSG00000235529 . 100506749 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ARHGAP26-IT1 ARHGAP26 intronic transcript 1 HGNC:41429 ENSG00000230789 . 100874372 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ARHGAP26-IT1 ARHGAP26 intronic transcript 1 HGNC:41429 ENSG00000230789 . 100874372 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.010933057 knock down down-regulator 0.00569696 REG00012 ARHGAP26-IT1 ARHGAP26 intronic transcript 1 HGNC:41429 ENSG00000230789 . 100874372 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.945553978 knock down down-regulator 0.026957913 REG00012 DIP2A-IT1 DIP2A intronic transcript 1 HGNC:41430 ENSG00000223692 . 100862692 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DIP2A-IT1 DIP2A intronic transcript 1 HGNC:41430 ENSG00000223692 . 100862692 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.854292427 knock down down-regulator 0.0093671 REG00012 DIP2A-IT1 DIP2A intronic transcript 1 HGNC:41430 ENSG00000223692 . 100862692 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.780624614 knock down down-regulator 0.000470193 REG00012 ERI3-IT1 ERI3 intronic transcript 1 HGNC:41431 ENSG00000233602 . 100874278 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RSF1-IT2 RSF1 intronic transcript 2 HGNC:41438 ENSG00000254985 . 100874307 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.042638092 knock down up-regulate 2.47E-05 REG00012 ASH1L-IT1 ASH1L intronic transcript 1 HGNC:41449 ENSG00000227773 . 106478976 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.776863179 knock down down-regulator 0.01468917 REG00012 ASH1L-IT1 ASH1L intronic transcript 1 HGNC:41449 ENSG00000227773 . 106478976 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.897561781 knock down down-regulator 0.037179736 REG00012 RNF216-IT1 RNF216 intronic transcript 1 HGNC:41463 ENSG00000237738 . 100874342 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.888768087 knock down up-regulate 0.009146829 REG00012 RNF216-IT1 RNF216 intronic transcript 1 HGNC:41463 ENSG00000237738 . 100874342 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.818222743 knock down up-regulate 0.00380912 REG00012 WWTR1-IT1 WWTR1 intronic transcript 1 HGNC:41469 ENSG00000241985 . 106478977 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.818031913 knock down up-regulate 0.003021758 REG00012 WWTR1-IT1 WWTR1 intronic transcript 1 HGNC:41469 ENSG00000241985 . 106478977 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.621659615 knock down up-regulate 3.36E-10 REG00012 WWTR1-IT1 WWTR1 intronic transcript 1 HGNC:41469 ENSG00000241985 . 106478977 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.066872401 knock down up-regulate 0.021536179 REG00012 RABGAP1L-IT1 RABGAP1L intronic transcript 1 HGNC:41471 ENSG00000223525 . 106480742 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.703452349 knock down down-regulator 0.002380461 REG00012 RABGAP1L-IT1 RABGAP1L intronic transcript 1 HGNC:41471 ENSG00000223525 . 106480742 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.699260296 knock down down-regulator 0.005049097 REG00012 HS1BP3-IT1 HS1BP3 intronic transcript 1 HGNC:41474 ENSG00000231948 . 100874343 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 HS1BP3-IT1 HS1BP3 intronic transcript 1 HGNC:41474 ENSG00000231948 . 100874343 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.842047747 knock down up-regulate 0.043431784 REG00012 HS1BP3-IT1 HS1BP3 intronic transcript 1 HGNC:41474 ENSG00000231948 . 100874343 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.75881029 knock out up-regulate 0.014913368 REG00012 HS1BP3-IT1 HS1BP3 intronic transcript 1 HGNC:41474 ENSG00000231948 . 100874343 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.341548088 knock down down-regulator 6.00E-06 REG00012 ANKRD44-IT1 ANKRD44 intronic transcript 1 HGNC:41477 ENSG00000236977 . 101927547 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.618946711 knock down down-regulator 0.030335843 REG00012 ANKRD44-IT1 ANKRD44 intronic transcript 1 HGNC:41477 ENSG00000236977 . 101927547 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.703104893 knock down down-regulator 6.02E-11 REG00012 AGBL4-IT1 AGBL4 intronic transcript 1 HGNC:41482 ENSG00000225623 . 100874313 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ARHGEF38-IT1 ARHGEF38 intronic transcript 1 HGNC:41483 ENSG00000249885 . 100874374 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.300519001 knock down down-regulator 1.48E-05 REG00012 TTLL7-IT1 TTLL7 intronic transcript 1 HGNC:41486 ENSG00000233061 . 100874314 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.006931203 knock down down-regulator 0.000833466 REG00012 TTLL7-IT1 TTLL7 intronic transcript 1 HGNC:41486 ENSG00000233061 . 100874314 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 2.611187642 knock down up-regulate 0.003452199 REG00012 ZBTB40-IT1 ZBTB40 intronic transcript 1 HGNC:41493 ENSG00000237200 . 100874345 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.007694932 knock down down-regulator 0.003813449 REG00012 ZBTB40-IT1 ZBTB40 intronic transcript 1 HGNC:41493 ENSG00000237200 . 100874345 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.817938991 knock down up-regulate 2.24E-08 REG00012 NALF1-IT1 NALF1 intronic transcript 1 HGNC:41503 ENSG00000227248 . 100874375 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.665885266 knock down down-regulator 0.002481997 REG00012 BRWD1-IT1 BRWD1 intronic transcript 1 HGNC:41920 ENSG00000237373 . 106480743 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 3.862408365 knock down up-regulate 4.63E-09 REG00012 BRWD1-IT1 BRWD1 intronic transcript 1 HGNC:41920 ENSG00000237373 . 106480743 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.282091074 knock down down-regulator 6.83E-08 REG00012 BRWD1-IT1 BRWD1 intronic transcript 1 HGNC:41920 ENSG00000237373 . 106480743 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.222108343 knock down down-regulator 1.61E-08 REG00012 LINC00326 Long intergenic non-protein coding RNA 326 HGNC:41926 ENSG00000231023 . 285735 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.999863633 knock down down-regulator 3.81E-22 REG00012 LINC00326 Long intergenic non-protein coding RNA 326 HGNC:41926 ENSG00000231023 . 285735 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.925552763 knock down up-regulate 2.38E-06 REG00012 LINC00326 Long intergenic non-protein coding RNA 326 HGNC:41926 ENSG00000231023 . 285735 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -3.541930101 knock down down-regulator 1.41E-06 REG00012 LINC00326 Long intergenic non-protein coding RNA 326 HGNC:41926 ENSG00000231023 . 285735 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.780097071 knock down up-regulate 1.70E-19 REG00012 ZNRF3-AS1 ZNRF3 antisense RNA 1 HGNC:41927 ENSG00000177993 . 100874123 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HM13-AS1 HM13 antisense RNA 1 HGNC:41940 ENSG00000230613 . 100874042 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 HM13-AS1 HM13 antisense RNA 1 HGNC:41940 ENSG00000230613 . 100874042 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.749841251 knock down up-regulate 0.004942805 REG00012 HM13-AS1 HM13 antisense RNA 1 HGNC:41940 ENSG00000230613 . 100874042 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.267630016 knock down up-regulate 0.045867444 REG00012 ZEB1-AS1 ZEB1 antisense RNA 1 HGNC:42354 ENSG00000237036 . 220930 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.677743756 knock down down-regulator 4.87E-06 REG00012 TPRG1-AS1 TPRG1 antisense RNA 1 HGNC:42391 ENSG00000234076 . 100874043 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TPRG1-AS1 TPRG1 antisense RNA 1 HGNC:42391 ENSG00000234076 . 100874043 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 3.220790728 knock down up-regulate 3.44E-05 REG00012 TPRG1-AS1 TPRG1 antisense RNA 1 HGNC:42391 ENSG00000234076 . 100874043 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.955767848 knock down down-regulator 0.007549422 REG00012 NAMA Non-protein coding RNA, associated with MAP kinase pathway and growth arrest HGNC:42408 ENSG00000271086 . 100996569 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ADAMTS9-AS2 ADAMTS9 antisense RNA 2 HGNC:42435 ENSG00000241684 . 100507098 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MYLK-AS1 MYLK antisense RNA 1 HGNC:42440 ENSG00000239523 . 100506826 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.552870422 knock down down-regulator 0.037583841 REG00012 MYLK-AS1 MYLK antisense RNA 1 HGNC:42440 ENSG00000239523 . 100506826 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.793768259 knock down up-regulate 0.013571001 REG00012 MYLK-AS1 MYLK antisense RNA 1 HGNC:42440 ENSG00000239523 . 100506826 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.807386541 knock down up-regulate 0.04937366 REG00012 BSN-AS2 BSN divergent transcript HGNC:42445 ENSG00000226913 . 100132677 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ALDH1L1-AS2 ALDH1L1 antisense RNA 2 HGNC:42446 ENSG00000246022 . 100862662 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HLX-AS1 HLX antisense RNA 1 HGNC:42509 ENSG00000257551 . 100873924 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.615010201 knock out down-regulator 0.02126888 REG00012 DENND5B-AS1 DENND5B antisense RNA 1 HGNC:42517 ENSG00000255867 . 100874249 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DENND5B-AS1 DENND5B antisense RNA 1 HGNC:42517 ENSG00000255867 . 100874249 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.780432365 knock down down-regulator 7.25E-05 REG00012 DENND5B-AS1 DENND5B antisense RNA 1 HGNC:42517 ENSG00000255867 . 100874249 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.764201907 knock down down-regulator 0.012693202 REG00012 DENND5B-AS1 DENND5B antisense RNA 1 HGNC:42517 ENSG00000255867 . 100874249 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.126914573 knock down up-regulate 0.017220198 REG00012 DENND5B-AS1 DENND5B antisense RNA 1 HGNC:42517 ENSG00000255867 . 100874249 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.598530958 knock down down-regulator 0.00399357 REG00012 LINC00392 Long intergenic non-protein coding RNA 392 HGNC:42720 ENSG00000228295 . 100874155 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00396 Long intergenic non-protein coding RNA 396 HGNC:42724 ENSG00000231428 . 104355146 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00423 Long intergenic non-protein coding RNA 423 HGNC:42758 ENSG00000226968 . 100874167 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00598 Long intergenic non-protein coding RNA 598 HGNC:42770 ENSG00000215483 . 646982 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00445 Long intergenic non-protein coding RNA 445 HGNC:42782 ENSG00000236036 . 100507114 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SLC25A30-AS1 SLC25A30 antisense RNA 1 HGNC:42795 ENSG00000251015 . 100874259 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00458 Long intergenic non-protein coding RNA 458 HGNC:42807 ENSG00000234787 . 100507428 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00460 Long intergenic non-protein coding RNA 460 HGNC:42809 ENSG00000233532 . 728192 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.438886173 knock out up-regulate 1.21E-09 REG00012 MRPL23-AS1 MRPL23 antisense RNA 1 HGNC:42812 ENSG00000226416 . 100133545 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MRPL23-AS1 MRPL23 antisense RNA 1 HGNC:42812 ENSG00000226416 . 100133545 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.703462858 knock down up-regulate 0.028246227 REG00012 MRPL23-AS1 MRPL23 antisense RNA 1 HGNC:42812 ENSG00000226416 . 100133545 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.653162988 knock down down-regulator 0.038722809 REG00012 BOLA3-AS1 BOLA3 divergent transcript HGNC:42922 ENSG00000225439 . 100507171 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 BOLA3-DT BOLA3 divergent transcript HGNC:42922 ENSG00000225439 . 100507171 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.655089795 knock down down-regulator 0.012322196 REG00012 BOLA3-DT BOLA3 divergent transcript HGNC:42922 ENSG00000225439 . 100507171 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.751930865 knock down down-regulator 0.031416484 REG00012 DNAJC27-AS1 DNAJC27 antisense RNA 1 HGNC:42943 ENSG00000224165 . 729723 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.601693673 knock down down-regulator 0.00289358 REG00012 DNAJC27-AS1 DNAJC27 antisense RNA 1 HGNC:42943 ENSG00000224165 . 729723 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.606656421 knock down up-regulate 0.010365199 REG00012 PCBP1-AS1 PCBP1 antisense RNA 1 HGNC:42948 ENSG00000179818 . 400960 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02898 Long intergenic non-protein coding RNA 2898 HGNC:42966 ENSG00000205086 CB091_HUMAN 400950 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.915638561 knock down down-regulator 0.036228052 REG00012 HIF1A-AS1 HIF1A antisense RNA 1 HGNC:43014 ENSG00000258777 . 100750246 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HIF1A-AS1 HIF1A antisense RNA 1 HGNC:43014 ENSG00000258777 . 100750246 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.385651536 knock down down-regulator 3.26E-11 REG00012 HIF1A-AS1 HIF1A antisense RNA 1 HGNC:43014 ENSG00000258777 . 100750246 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.221191158 knock down down-regulator 6.18E-05 REG00012 HIF1A-AS1 HIF1A antisense RNA 1 HGNC:43014 ENSG00000258777 . 100750246 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.83531738 knock down up-regulate 0.000565398 REG00012 HIF1A-AS2 HIF1A antisense RNA 2 HGNC:43015 . . 100750247 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DICER1-AS1 DICER1 antisense RNA 1 HGNC:43017 ENSG00000235706 . 400242 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.771956638 knock down down-regulator 2.43E-15 REG00012 DICER1-AS1 DICER1 antisense RNA 1 HGNC:43017 ENSG00000235706 . 400242 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.703345704 knock down down-regulator 0.000142065 REG00012 LINC00492 Long intergenic non-protein coding RNA 492 HGNC:43429 ENSG00000250958 . 100861468 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.690818447 knock down down-regulator 2.25E-16 REG00012 SLC25A5-AS1 SLC25A5 antisense RNA 1 HGNC:43438 ENSG00000224281 . 100303728 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DGUOK-AS1 DGUOK antisense RNA 1 HGNC:43441 ENSG00000237883 . 100874048 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 P4HA2-AS1 P4HA2 antisense RNA 1 HGNC:43560 ENSG00000237714 . 100861518 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 P4HA2-AS1 P4HA2 antisense RNA 1 HGNC:43560 ENSG00000237714 . 100861518 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.68188791 knock down down-regulator 0.002061109 REG00012 OIP5-AS1 OIP5 antisense RNA 1 HGNC:43563 ENSG00000247556 . 729082 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 OIP5-AS1 OIP5 antisense RNA 1 HGNC:43563 ENSG00000247556 . 729082 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.707138014 knock down up-regulate 0.00789366 REG00012 OIP5-AS1 OIP5 antisense RNA 1 HGNC:43563 ENSG00000247556 . 729082 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.200208607 knock down up-regulate 0.005259741 REG00012 LINC00511 Long intergenic non-protein coding RNA 511 HGNC:43564 ENSG00000227036 . 400619 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00511 Long intergenic non-protein coding RNA 511 HGNC:43564 ENSG00000227036 . 400619 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 2.283187793 knock down up-regulate 1.67E-79 REG00012 LINC00511 Long intergenic non-protein coding RNA 511 HGNC:43564 ENSG00000227036 . 400619 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.665527873 knock down up-regulate 7.04E-45 REG00012 LINC00511 Long intergenic non-protein coding RNA 511 HGNC:43564 ENSG00000227036 . 400619 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.186864479 knock down up-regulate 0.002927796 REG00012 LINC00513 Long intergenic non-protein coding RNA 513 HGNC:43566 ENSG00000233559 . 100506860 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00513 Long intergenic non-protein coding RNA 513 HGNC:43566 ENSG00000233559 . 100506860 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.764522273 knock down down-regulator 7.30E-05 REG00012 LINC00513 Long intergenic non-protein coding RNA 513 HGNC:43566 ENSG00000233559 . 100506860 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.692503513 knock down down-regulator 3.51E-34 REG00012 LOC101927768 HDAC2 and HS3ST5 antisense RNA 2 HGNC:43590 ENSG00000228624 . 101927768 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GDNF-AS1 GDNF antisense RNA 1 HGNC:43592 ENSG00000248587 . 100861519 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.787406304 knock down up-regulate 5.50E-09 REG00012 LIFR-AS1 LIFR antisense RNA 1 HGNC:43600 ENSG00000244968 . 100506495 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.811016548 knock down down-regulator 0.044666244 REG00012 LIFR-AS1 LIFR antisense RNA 1 HGNC:43600 ENSG00000244968 . 100506495 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 2.236852857 knock down up-regulate 3.10E-05 REG00012 LRRC3-DT LRRC3 divergent transcript HGNC:43636 ENSG00000229356 . 100861510 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.399818838 knock down down-regulator 0.008125628 REG00012 LRRC3-DT LRRC3 divergent transcript HGNC:43636 ENSG00000229356 . 100861510 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.570212994 knock down down-regulator 3.48E-05 REG00012 CIBAR1-DT CIBAR1 divergent transcript HGNC:43644 ENSG00000246662 . 642924 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.693161981 knock down down-regulator 0.041454465 REG00012 MAFG-AS1 MYC inducible lncRNA inactivating p53 HGNC:43649 ENSG00000265688 . 92659 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 HEXD-IT1 HEXD intronic transcript 1 HGNC:43650 ENSG00000279066 . 100505970 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.887590578 knock down down-regulator 1.51E-25 REG00012 HEXD-IT1 HEXD intronic transcript 1 HGNC:43650 ENSG00000279066 . 100505970 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.494859759 knock down down-regulator 0.027383755 REG00012 HEXD-IT1 HEXD intronic transcript 1 HGNC:43650 ENSG00000279066 . 100505970 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.778931322 knock down down-regulator 7.26E-20 REG00012 NARF-IT1 NARF intronic transcript 1 HGNC:43651 ENSG00000266236 . 100506001 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.807883396 knock down up-regulate 0.001389152 REG00012 PROX1-AS1 PROX1 antisense RNA 1 HGNC:43656 ENSG00000230461 . 100505832 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PROX1-AS1 PROX1 antisense RNA 1 HGNC:43656 ENSG00000230461 . 100505832 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.241326683 knock down down-regulator 0.000381032 REG00012 PROX1-AS1 PROX1 antisense RNA 1 HGNC:43656 ENSG00000230461 . 100505832 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.720602706 knock down down-regulator 0.009111421 REG00012 CBR3-AS1 CBR3 antisense RNA 1 HGNC:43664 ENSG00000236830 . 100506428 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.654349357 knock down down-regulator 0.001316605 REG00012 CBR3-AS1 CBR3 antisense RNA 1 HGNC:43664 ENSG00000236830 . 100506428 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.603631746 knock down down-regulator 0.000150789 REG00012 LINC00539 Long intergenic non-protein coding RNA 539 HGNC:43672 ENSG00000224429 . 100652865 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TSC22D1-AS1 TSC22D1 antisense RNA 1 HGNC:43684 ENSG00000278156 . 641467 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TPT1-AS1 TPT1 antisense RNA 1 HGNC:43686 ENSG00000170919 . 100190939 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TPT1-AS1 TPT1 antisense RNA 1 HGNC:43686 ENSG00000170919 . 100190939 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -3.379004635 knock down down-regulator 0.000189775 REG00012 GAS6-DT GAS6 divergent transcript HGNC:43694 ENSG00000272695 . 100506394 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.758876246 knock out down-regulator 0.00054853 REG00012 LINC00557 Long intergenic non-protein coding RNA 557 HGNC:43701 ENSG00000260962 . 100861544 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SWINGN SWI/SNF complex interacting GAS6 enhancer non-coding RNA HGNC:43709 ENSG00000260910 . 100861555 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.805872485 knock down down-regulator 0.031008602 REG00012 SWINGN SWI/SNF complex interacting GAS6 enhancer non-coding RNA HGNC:43709 ENSG00000260910 . 100861555 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -3.782465118 knock out down-regulator 0.016069403 REG00012 SWINGN SWI/SNF complex interacting GAS6 enhancer non-coding RNA HGNC:43709 ENSG00000260910 . 100861555 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 3.804833223 knock down up-regulate 0.043328456 REG00012 PCAT6 Prostate cancer associated transcript 6 HGNC:43714 ENSG00000228288 . 100506696 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 KANSL1-AS1 KANSL1 antisense RNA 1 HGNC:43740 ENSG00000214401 . 644246 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 KANSL1-AS1 KANSL1 antisense RNA 1 HGNC:43740 ENSG00000214401 . 644246 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.726397657 knock down down-regulator 0.001892095 REG00012 KANSL1-AS1 KANSL1 antisense RNA 1 HGNC:43740 ENSG00000214401 . 644246 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.597472824 knock down up-regulate 5.41E-06 REG00012 HOXA-AS2 HOXA cluster antisense RNA 2 HGNC:43745 ENSG00000253552 . 285943 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -3.512996598 knock down down-regulator 0.04073176 REG00012 HOXA-AS2 HOXA cluster antisense RNA 2 HGNC:43745 ENSG00000253552 . 285943 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 4.214264831 knock down up-regulate 0.043098553 REG00012 HOXA-AS2 HOXA cluster antisense RNA 2 HGNC:43745 ENSG00000253552 . 285943 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.271024875 knock down down-regulator 0.002508682 REG00012 HOXC-AS1 HOXC cluster antisense RNA 1 HGNC:43749 ENSG00000250451 . 100874363 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.37E+00 . . . REG00012 HAGLR HOXD antisense growth-associated long non-coding RNA HGNC:43755 ENSG00000224189 . 401022 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HAGLR HOXD antisense growth-associated long non-coding RNA HGNC:43755 ENSG00000224189 . 401022 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.688558312 knock down down-regulator 0.004145191 REG00012 HAGLR HOXD antisense growth-associated long non-coding RNA HGNC:43755 ENSG00000224189 . 401022 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.818452353 knock down down-regulator 0.016734651 REG00012 HAGLR HOXD antisense growth-associated long non-coding RNA HGNC:43755 ENSG00000224189 . 401022 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.663920955 knock down down-regulator 0.011835124 REG00012 FTO-IT1 FTO intronic transcript 1 HGNC:43758 . . 100505692 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC-ROR Long intergenic non-protein coding RNA, regulator of reprogramming HGNC:43773 ENSG00000258609 . 100885779 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00581 Long intergenic non-protein coding RNA 581 HGNC:43840 ENSG00000280989 . 100874531 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00581 Long intergenic non-protein coding RNA 581 HGNC:43840 ENSG00000280989 . 100874531 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.70194965 knock down up-regulate 0.000876717 REG00012 CD27-AS1 CD27 antisense RNA 1 HGNC:43896 ENSG00000215039 . 678655 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 4.2923196 knock down up-regulate 0.000145311 REG00012 CD27-AS1 CD27 antisense RNA 1 HGNC:43896 ENSG00000215039 . 678655 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.711891022 knock down down-regulator 0.000141081 REG00012 CD27-AS1 CD27 antisense RNA 1 HGNC:43896 ENSG00000215039 . 678655 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -3.565974585 knock down down-regulator 0.000498616 REG00012 CD27-AS1 CD27 antisense RNA 1 HGNC:43896 ENSG00000215039 . 678655 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.888229036 knock down down-regulator 0.010040892 REG00012 CD27-AS1 CD27 antisense RNA 1 HGNC:43896 ENSG00000215039 . 678655 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.742736618 knock down down-regulator 0.002693218 REG00012 CD27-AS1 CD27 antisense RNA 1 HGNC:43896 ENSG00000215039 . 678655 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.935718064 knock down down-regulator 0.000110336 REG00012 CASC17 Cancer susceptibility 17 HGNC:43911 ENSG00000260785 . 101928165 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.466523978 knock down up-regulate 0.000256981 REG00012 CASC17 Cancer susceptibility 17 HGNC:43911 ENSG00000260785 . 101928165 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.701044426 knock down up-regulate 0.000144828 REG00012 LINC00601 Long intergenic non-protein coding RNA 601 HGNC:43916 ENSG00000235180 . 101101772 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.910356122 knock down up-regulate 5.40E-06 REG00012 LINC00601 Long intergenic non-protein coding RNA 601 HGNC:43916 ENSG00000235180 . 101101772 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.428028835 knock out down-regulator 7.97E-07 REG00012 LINC00601 Long intergenic non-protein coding RNA 601 HGNC:43916 ENSG00000235180 . 101101772 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.683529342 knock down up-regulate 2.13E-06 REG00012 LINC00601 Long intergenic non-protein coding RNA 601 HGNC:43916 ENSG00000235180 . 101101772 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.155553914 knock down up-regulate 2.08E-07 REG00012 LINC00601 Long intergenic non-protein coding RNA 601 HGNC:43916 ENSG00000235180 . 101101772 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.008359089 knock down down-regulator 3.19E-17 REG00012 PTCSC3 Papillary thyroid carcinoma susceptibility candidate 3 HGNC:43959 ENSG00000259104 . 100886964 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.366382994 knock down up-regulate 0.000368351 REG00012 PTCSC3 Papillary thyroid carcinoma susceptibility candidate 3 HGNC:43959 ENSG00000259104 . 100886964 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.710275258 knock down up-regulate 0.033353634 REG00012 USP46-DT USP46 divergent transcript HGNC:43991 ENSG00000248866 . 643783 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.270600184 knock down down-regulator 0.004529512 REG00012 USP46-DT USP46 divergent transcript HGNC:43991 ENSG00000248866 . 643783 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.621031694 knock down up-regulate 0.000334862 REG00012 SEC24B-AS1 SEC24B antisense RNA 1 HGNC:44003 ENSG00000247950 . 100533182 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00616 Long intergenic non-protein coding RNA 616 HGNC:44065 ENSG00000248307 . 641365 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00616 Long intergenic non-protein coding RNA 616 HGNC:44065 ENSG00000248307 . 641365 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.689400132 knock down down-regulator 1.78E-05 REG00012 LINC00616 Long intergenic non-protein coding RNA 616 HGNC:44065 ENSG00000248307 . 641365 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.760490148 knock down down-regulator 0.042169068 REG00012 TUNAR TCL1 upstream neural differentiation-associated RNA HGNC:44088 ENSG00000250366 . 100507043 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 STAU2-AS1 STAU2 antisense RNA 1 HGNC:44101 ENSG00000253302 . 100128126 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CCDC183-AS1 CCDC183 antisense RNA 1 HGNC:44105 ENSG00000228544 . 100131193 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CCDC183-AS1 CCDC183 antisense RNA 1 HGNC:44105 ENSG00000228544 . 100131193 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 3.14172477 knock down up-regulate 1.41E-05 REG00012 CCDC183-AS1 CCDC183 antisense RNA 1 HGNC:44105 ENSG00000228544 . 100131193 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.45916265 knock down up-regulate 0.008376281 REG00012 LIMD1-AS1 LIMD1 antisense RNA 1 HGNC:44107 ENSG00000230530 . 644714 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LIMD1-AS1 LIMD1 antisense RNA 1 HGNC:44107 ENSG00000230530 . 644714 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 3.169504592 knock down up-regulate 0.008906286 REG00012 LIMD1-AS1 LIMD1 antisense RNA 1 HGNC:44107 ENSG00000230530 . 644714 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 3.424232308 knock down up-regulate 0.019574486 REG00012 EFCAB14-AS1 EFCAB14 antisense RNA 1 HGNC:44108 ENSG00000228237 . 100130197 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PARD6G-AS1 PARD6G antisense RNA 1 HGNC:44109 ENSG00000267270 . 100130522 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PARD6G-AS1 PARD6G antisense RNA 1 HGNC:44109 ENSG00000267270 . 100130522 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.603543205 knock down up-regulate 0.036379475 REG00012 PARD6G-AS1 PARD6G antisense RNA 1 HGNC:44109 ENSG00000267270 . 100130522 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.809176955 knock down up-regulate 0.000803322 REG00012 PHKA2-AS1 PHKA2 antisense RNA 1 HGNC:44110 ENSG00000237836 . 100132163 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 PHKA2-AS1 PHKA2 antisense RNA 1 HGNC:44110 ENSG00000237836 . 100132163 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PHKA2-AS1 PHKA2 antisense RNA 1 HGNC:44110 ENSG00000237836 . 100132163 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.586769802 knock down down-regulator 0.008545858 REG00012 PITPNA-AS1 PITPNA antisense RNA 1 HGNC:44116 ENSG00000236618 . 100306951 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PITPNA-AS1 PITPNA antisense RNA 1 HGNC:44116 ENSG00000236618 . 100306951 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.823024673 knock down up-regulate 0.007304972 REG00012 PITPNA-AS1 PITPNA antisense RNA 1 HGNC:44116 ENSG00000236618 . 100306951 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.507460187 knock down up-regulate 4.65E-05 REG00012 STARD4-AS1 STARD4 antisense RNA 1 HGNC:44117 ENSG00000246859 . 100505678 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NAPA-AS1 NAPA antisense RNA 1 HGNC:44118 ENSG00000268061 . 100505681 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NAPA-AS1 NAPA antisense RNA 1 HGNC:44118 ENSG00000268061 . 100505681 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.932319002 knock down up-regulate 0.000797528 REG00012 NAPA-AS1 NAPA antisense RNA 1 HGNC:44118 ENSG00000268061 . 100505681 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.794451471 knock down down-regulator 0.000105597 REG00012 DACT3-AS1 DACT3 antisense RNA 1 HGNC:44120 ENSG00000245598 . 100506068 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PXN-AS1 PXN antisense RNA 1 HGNC:44123 ENSG00000255857 . 100506649 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TTN-AS1 TTN antisense RNA 1 HGNC:44124 ENSG00000237298 . 100506866 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PSMD6-AS2 PSMD6 antisense RNA 2 HGNC:44125 ENSG00000239653 . 100507062 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLFNL1-AS1 SLFNL1 antisense RNA 1 HGNC:44126 ENSG00000281207 . 100507178 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLFNL1-AS1 SLFNL1 antisense RNA 1 HGNC:44126 ENSG00000281207 . 100507178 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.854700953 knock down down-regulator 2.67E-05 REG00012 SLFNL1-AS1 SLFNL1 antisense RNA 1 HGNC:44126 ENSG00000281207 . 100507178 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.730697668 knock down down-regulator 0.000769018 REG00012 RNF157-AS1 RNF157 antisense RNA 1 HGNC:44127 ENSG00000267128 . 100507218 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.991925348 knock down up-regulate 0.0385946 REG00012 RNF157-AS1 RNF157 antisense RNA 1 HGNC:44127 ENSG00000267128 . 100507218 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.998062011 knock down down-regulator 0.005643787 REG00012 LRP4-AS1 LRP4 antisense RNA 1 HGNC:44128 ENSG00000247675 . 100507401 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EHHADH-AS1 EHHADH antisense RNA 1 HGNC:44133 ENSG00000223358 . 339926 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SRD5A3-AS1 SRD5A3 antisense RNA 1 HGNC:44138 ENSG00000249700 . 100506462 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 USP3-AS1 USP3 antisense RNA 1 HGNC:44140 ENSG00000259248 . 100130855 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ADPGK-AS1 ADPGK antisense RNA 1 HGNC:44144 ENSG00000260898 . 100287559 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ARRDC3-AS1 ARRDC3 antisense RNA 1 HGNC:44145 ENSG00000281357 . 100129716 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.503104097 knock down up-regulate 5.70E-09 REG00012 ARRDC3-AS1 ARRDC3 antisense RNA 1 HGNC:44145 ENSG00000281357 . 100129716 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.325632035 knock down up-regulate 0.001036089 REG00012 TSPOAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 HGNC:44148 ENSG00000265148 . 100506779 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TSPOAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 HGNC:44148 ENSG00000265148 . 100506779 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.859343736 knock down down-regulator 0.002894279 REG00012 TSPOAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 HGNC:44148 ENSG00000265148 . 100506779 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.883761703 knock down down-regulator 0.002178422 REG00012 DLG1-AS1 DLG1 antisense RNA 1 HGNC:44154 ENSG00000227375 . 100507086 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ELOVL2-AS1 ELOVL2 antisense RNA 1 HGNC:44156 ENSG00000230314 . 100506409 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GABPB1-AS1 GABPB1 antisense RNA 1 HGNC:44157 ENSG00000244879 . 100129387 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GABPB1-AS1 GABPB1 antisense RNA 1 HGNC:44157 ENSG00000244879 . 100129387 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.677700061 knock down up-regulate 4.14E-07 REG00012 GABPB1-AS1 GABPB1 antisense RNA 1 HGNC:44157 ENSG00000244879 . 100129387 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.89898989 knock down up-regulate 1.54E-12 REG00012 GABPB1-AS1 GABPB1 antisense RNA 1 HGNC:44157 ENSG00000244879 . 100129387 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.543554074 knock down up-regulate 7.68E-31 REG00012 TMPO-AS1 TMPO antisense RNA 1 HGNC:44158 ENSG00000257167 . 100128191 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TMPO-AS1 TMPO antisense RNA 1 HGNC:44158 ENSG00000257167 . 100128191 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -2.818869651 knock down down-regulator 0.000497863 REG00012 TMPO-AS1 TMPO antisense RNA 1 HGNC:44158 ENSG00000257167 . 100128191 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.952388306 knock down down-regulator 0.002428337 REG00012 ACVR2B-AS1 ACVR2B antisense RNA 1 HGNC:44161 ENSG00000229589 . 100128640 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SRRM2-AS1 SRRM2 antisense RNA 1 HGNC:44162 ENSG00000205913 . 100128788 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SRRM2-AS1 SRRM2 antisense RNA 1 HGNC:44162 ENSG00000205913 . 100128788 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.924360234 knock down up-regulate 0.035997747 REG00012 SRRM2-AS1 SRRM2 antisense RNA 1 HGNC:44162 ENSG00000205913 . 100128788 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.605717018 knock down down-regulator 0.023289217 REG00012 SRRM2-AS1 SRRM2 antisense RNA 1 HGNC:44162 ENSG00000205913 . 100128788 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.875128364 knock down down-regulator 0.028295113 REG00012 ZFHX4-AS1 ZFHX4 antisense RNA 1 HGNC:44165 ENSG00000253661 . 100192378 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 VPS13A-AS1 VPS13A antisense RNA 1 HGNC:44167 ENSG00000232998 . 100286938 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOXL1-AS1 LOXL1 antisense RNA 1 HGNC:44169 ENSG00000261801 . 100287616 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 RASAL2-AS1 RASAL2 antisense RNA 1 HGNC:44170 ENSG00000224687 . 100302401 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RASAL2-AS1 RASAL2 antisense RNA 1 HGNC:44170 ENSG00000224687 . 100302401 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.968475148 knock down down-regulator 0.000869562 REG00012 RASAL2-AS1 RASAL2 antisense RNA 1 HGNC:44170 ENSG00000224687 . 100302401 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.771164792 knock down down-regulator 0.004580851 REG00012 THAP9-AS1 THAP9 antisense RNA 1 HGNC:44172 ENSG00000251022 . 100499177 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 THAP9-AS1 THAP9 antisense RNA 1 HGNC:44172 ENSG00000251022 . 100499177 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.498339811 knock down up-regulate 0.037967352 REG00012 THAP9-AS1 THAP9 antisense RNA 1 HGNC:44172 ENSG00000251022 . 100499177 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.748467824 knock down up-regulate 0.040166343 REG00012 APTR Alu-mediated CDKN1A/p21 transcriptional regulator HGNC:44173 ENSG00000214293 . 100505854 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PTOV1-AS1 PTOV1 antisense RNA 1 HGNC:44174 ENSG00000268006 . 100506033 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.606855623 knock down down-regulator 0.005127234 REG00012 PTOV1-AS1 PTOV1 antisense RNA 1 HGNC:44174 ENSG00000268006 . 100506033 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.869683614 knock down down-regulator 0.013906298 REG00012 DDX11-AS1 DDX11 antisense RNA 1 HGNC:44176 ENSG00000245614 . 100506660 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SENCR Smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA HGNC:44177 ENSG00000254703 . 100507392 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.963078839 knock out down-regulator 0.007583189 REG00012 RAB11B-AS1 RAB11B antisense RNA 1 HGNC:44178 ENSG00000269386 . 100507567 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RAB11B-AS1 RAB11B antisense RNA 1 HGNC:44178 ENSG00000269386 . 100507567 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.733332244 knock down down-regulator 0.001006499 REG00012 RAB11B-AS1 RAB11B antisense RNA 1 HGNC:44178 ENSG00000269386 . 100507567 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.060341002 knock down down-regulator 0.013123949 REG00012 RAB11B-AS1 RAB11B antisense RNA 1 HGNC:44178 ENSG00000269386 . 100507567 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.822517823 knock down down-regulator 0.002036738 REG00012 RAB11B-AS1 RAB11B antisense RNA 1 HGNC:44178 ENSG00000269386 . 100507567 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.847370481 knock down down-regulator 0.004287071 REG00012 RAB11B-AS1 RAB11B antisense RNA 1 HGNC:44178 ENSG00000269386 . 100507567 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.803807182 knock down down-regulator 0.003883168 REG00012 ATP6V0E2-AS1 ATP6V0E2 antisense RNA 1 HGNC:44180 ENSG00000204934 . 401431 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ATP6V0E2-AS1 ATP6V0E2 antisense RNA 1 HGNC:44180 ENSG00000204934 . 401431 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.111723113 knock down up-regulate 1.25E-12 REG00012 ATP6V0E2-AS1 ATP6V0E2 antisense RNA 1 HGNC:44180 ENSG00000204934 . 401431 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -4.131796902 knock down down-regulator 1.32E-47 REG00012 HHIP-AS1 HHIP antisense RNA 1 HGNC:44182 ENSG00000248890 . 646576 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 3.186610615 knock down up-regulate 0.030395453 REG00012 HHIP-AS1 HHIP antisense RNA 1 HGNC:44182 ENSG00000248890 . 646576 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.994578377 knock out down-regulator 0.049471819 REG00012 STXBP5-AS1 STXBP5 antisense RNA 1 HGNC:44183 ENSG00000233452 . 729178 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NAGPA-AS1 NAGPA antisense RNA 1 HGNC:44184 . . 100507589 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SLC2A1-AS1 SLC2A1 divergent transcript HGNC:44187 ENSG00000227533 . 440584 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLC2A1-DT SLC2A1 divergent transcript HGNC:44187 ENSG00000227533 . 440584 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.653372895 knock down down-regulator 0.006944221 REG00012 SLC2A1-DT SLC2A1 divergent transcript HGNC:44187 ENSG00000227533 . 440584 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.254159411 knock down up-regulate 0.001139358 REG00012 SLC2A1-DT SLC2A1 divergent transcript HGNC:44187 ENSG00000227533 . 440584 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.720922703 knock down down-regulator 7.35E-06 REG00012 LINC00622 Long intergenic non-protein coding RNA 622 HGNC:44251 ENSG00000260941 . 644242 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00623 Long intergenic non-protein coding RNA 623 HGNC:44252 ENSG00000226067 . 728855 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.566697317 knock down down-regulator 5.42E-115 REG00012 LINC00623 Long intergenic non-protein coding RNA 623 HGNC:44252 ENSG00000226067 . 728855 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.689353531 knock down down-regulator 8.86E-12 REG00012 LINC00623 Long intergenic non-protein coding RNA 623 HGNC:44252 ENSG00000226067 . 728855 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.458532661 knock down up-regulate 4.82E-11 REG00012 LINC00623 Long intergenic non-protein coding RNA 623 HGNC:44252 ENSG00000226067 . 728855 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.868946708 knock down up-regulate 0.014713419 REG00012 LINC00623 Long intergenic non-protein coding RNA 623 HGNC:44252 ENSG00000226067 . 728855 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.610186557 knock down up-regulate 0.031731429 REG00012 EOLA1-DT EOLA1 divergent transcript HGNC:44265 ENSG00000241769 . 100131434 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.684429817 knock down down-regulator 0.010012401 REG00012 EOLA1-DT EOLA1 divergent transcript HGNC:44265 ENSG00000241769 . 100131434 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.687249845 knock down down-regulator 0.00060691 REG00012 EOLA1-DT EOLA1 divergent transcript HGNC:44265 ENSG00000241769 . 100131434 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.140384123 knock down up-regulate 0.002558158 REG00012 EOLA1-DT EOLA1 divergent transcript HGNC:44265 ENSG00000241769 . 100131434 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.687237518 knock down up-regulate 0.015270372 REG00012 ZNF674-AS1 ZNF674 antisense RNA 1 (head to head) HGNC:44266 ENSG00000230844 . 401588 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.660403088 knock down down-regulator 0.049566798 REG00012 ZNF674-AS1 ZNF674 antisense RNA 1 (head to head) HGNC:44266 ENSG00000230844 . 401588 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.825838608 knock down down-regulator 0.000221166 REG00012 ZNF674-AS1 ZNF674 antisense RNA 1 (head to head) HGNC:44266 ENSG00000230844 . 401588 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.520497005 knock down down-regulator 0.046825204 REG00012 TMEM44-AS1 TMEM44 antisense RNA 1 HGNC:44272 ENSG00000231770 . 100507297 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FOXN3-AS1 FOXN3 antisense RNA 1 HGNC:44290 ENSG00000258920 . 400236 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.055930553 knock out down-regulator 0.006571518 REG00012 FOXN3-AS1 FOXN3 antisense RNA 1 HGNC:44290 ENSG00000258920 . 400236 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.12422084 knock down up-regulate 9.23E-09 REG00012 LINC03033 Long intergenic non-protein coding RNA 3033 HGNC:44292 ENSG00000232774 . 400221 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.047165218 knock down down-regulator 1.22E-37 REG00012 LINC03033 Long intergenic non-protein coding RNA 3033 HGNC:44292 ENSG00000232774 . 400221 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.797738176 knock down up-regulate 1.09E-32 REG00012 LINC03033 Long intergenic non-protein coding RNA 3033 HGNC:44292 ENSG00000232774 . 400221 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.199857283 knock down down-regulator 2.09E-23 REG00012 LINC03033 Long intergenic non-protein coding RNA 3033 HGNC:44292 ENSG00000232774 . 400221 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.632535926 knock down up-regulate 0.000235464 REG00012 FUT8-AS1 FUT8 antisense RNA 1 HGNC:44294 ENSG00000276116 . 645431 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 3.529298982 knock out up-regulate 8.14E-06 REG00012 FUT8-AS1 FUT8 antisense RNA 1 HGNC:44294 ENSG00000276116 . 645431 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.75662656 knock down down-regulator 0.039155005 REG00012 FUT8-AS1 FUT8 antisense RNA 1 HGNC:44294 ENSG00000276116 . 645431 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.83497867 knock down up-regulate 0.04168565 REG00012 IL10RB-AS1 IL10RB divergent transcript HGNC:44303 ENSG00000223799 . 100288432 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00649 Long intergenic non-protein coding RNA 649 HGNC:44305 ENSG00000237945 . 100506334 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.973736255 knock down up-regulate 1.99E-06 REG00012 LINC00649 Long intergenic non-protein coding RNA 649 HGNC:44305 ENSG00000237945 . 100506334 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.115707416 knock down down-regulator 1.47E-07 REG00012 LCDR Lysosome cell death regulator HGNC:44308 ENSG00000273148 . 100270804 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.609077009 knock down up-regulate 0.018230724 REG00012 NORAD Non-coding RNA activated by DNA damage HGNC:44311 ENSG00000260032 . 647979 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNAP25-AS1 SNAP25 antisense RNA 1 HGNC:44312 ENSG00000227906 . 100131208 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.996589819 knock down down-regulator 0.007622945 REG00012 SNAP25-AS1 SNAP25 antisense RNA 1 HGNC:44312 ENSG00000227906 . 100131208 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.746810189 knock down down-regulator 0.002829873 REG00012 SNAP25-AS1 SNAP25 antisense RNA 1 HGNC:44312 ENSG00000227906 . 100131208 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.845424334 knock down down-regulator 0.002076541 REG00012 SDCBP2-AS1 SDCBP2 antisense RNA 1 HGNC:44314 ENSG00000234684 . 100507495 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.92477211 knock down up-regulate 0.000517648 REG00012 LINC00664 Long intergenic non-protein coding RNA 664 HGNC:44319 ENSG00000268658 . 400680 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00664 Long intergenic non-protein coding RNA 664 HGNC:44319 ENSG00000268658 . 400680 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.082741979 knock down down-regulator 0.000440832 REG00012 LINC00664 Long intergenic non-protein coding RNA 664 HGNC:44319 ENSG00000268658 . 400680 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.755224408 knock down down-regulator 4.57E-05 REG00012 LINC00665 Long intergenic non-protein coding RNA 665 HGNC:44323 ENSG00000232677 . 100506930 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00665 Long intergenic non-protein coding RNA 665 HGNC:44323 ENSG00000232677 . 100506930 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.966621956 knock down up-regulate 9.67E-06 REG00012 LINC00665 Long intergenic non-protein coding RNA 665 HGNC:44323 ENSG00000232677 . 100506930 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 3.022259747 knock down up-regulate 6.56E-18 REG00012 LINC00665 Long intergenic non-protein coding RNA 665 HGNC:44323 ENSG00000232677 . 100506930 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.024572412 knock down up-regulate 4.06E-07 REG00012 LINC00665 Long intergenic non-protein coding RNA 665 HGNC:44323 ENSG00000232677 . 100506930 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.693997724 knock down down-regulator 1.39E-15 REG00012 ZNF571-AS1 ZNF571 antisense RNA 1 HGNC:44324 ENSG00000267470 . 100507433 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ZNF571-AS1 ZNF571 antisense RNA 1 HGNC:44324 ENSG00000267470 . 100507433 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.234083008 knock down down-regulator 0.002947784 REG00012 ZNF571-AS1 ZNF571 antisense RNA 1 HGNC:44324 ENSG00000267470 . 100507433 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.485444606 knock down down-regulator 0.017844218 REG00012 LINC00668 Long intergenic non-protein coding RNA 668 HGNC:44328 ENSG00000265933 . 400643 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00668 Long intergenic non-protein coding RNA 668 HGNC:44328 ENSG00000265933 . 400643 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.918031223 knock down down-regulator 7.83E-06 REG00012 LINC00668 Long intergenic non-protein coding RNA 668 HGNC:44328 ENSG00000265933 . 400643 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.305835663 knock down down-regulator 0.000191438 REG00012 MIR924HG MIR924 host gene HGNC:44332 ENSG00000267374 . 647946 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.999855658 knock out down-regulator 0.013738376 REG00012 BAIAP2-DT BAIAP2 divergent transcript HGNC:44342 ENSG00000226137 . 440465 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.670495711 knock down up-regulate 9.47E-18 REG00012 BAIAP2-DT BAIAP2 divergent transcript HGNC:44342 ENSG00000226137 . 440465 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.824809613 knock down up-regulate 3.82E-10 REG00012 BAIAP2-DT BAIAP2 divergent transcript HGNC:44342 ENSG00000226137 . 440465 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -3.930458006 knock down down-regulator 8.56E-05 REG00012 C1QTNF1-AS1 C1QTNF1 antisense RNA 1 HGNC:44351 ENSG00000265096 . 100507410 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 C1QTNF1-AS1 C1QTNF1 antisense RNA 1 HGNC:44351 ENSG00000265096 . 100507410 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.472253387 knock down up-regulate 5.75E-06 REG00012 C1QTNF1-AS1 C1QTNF1 antisense RNA 1 HGNC:44351 ENSG00000265096 . 100507410 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.663048672 knock down up-regulate 0.000791725 REG00012 SNHG16 Small nucleolar RNA host gene 16 HGNC:44352 ENSG00000163597 . 100507246 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00673 Long intergenic non-protein coding RNA 673 HGNC:44354 . . 100499467 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00674 Long intergenic non-protein coding RNA 674 HGNC:44355 ENSG00000237854 . 100499466 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.693874444 knock down down-regulator 3.64E-07 REG00012 LINC00674 Long intergenic non-protein coding RNA 674 HGNC:44355 ENSG00000237854 . 100499466 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.867832935 knock down up-regulate 0.030672323 REG00012 TMEM220-AS1 TMEM220 antisense RNA 1 HGNC:44357 ENSG00000263400 . 101101775 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -4.098673466 knock down down-regulator 1.76E-05 REG00012 TMEM220-AS1 TMEM220 antisense RNA 1 HGNC:44357 ENSG00000263400 . 101101775 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 3.373855487 knock down up-regulate 4.85E-05 REG00012 TMEM220-AS1 TMEM220 antisense RNA 1 HGNC:44357 ENSG00000263400 . 101101775 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 2.451078299 knock down up-regulate 9.76E-07 REG00012 RAMP2-AS1 RAMP2 antisense RNA 1 HGNC:44358 ENSG00000197291 . 100190938 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.726042845 knock down down-regulator 0.020664758 REG00012 MAP3K14-AS1 MAP3K14 antisense RNA 1 HGNC:44359 ENSG00000267278 . 100133991 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00910 Long intergenic non-protein coding RNA 910 HGNC:44361 ENSG00000188825 . 100130581 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LMO7DN LMO7 downstream neighbor HGNC:44370 ENSG00000178734 LMO7D_HUMAN 729420 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00676 Long intergenic non-protein coding RNA 676 HGNC:44394 ENSG00000234854 . 101409253 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00678 Long intergenic non-protein coding RNA 678 HGNC:44413 ENSG00000254934 . 101410541 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00680 Long intergenic non-protein coding RNA 680 HGNC:44417 ENSG00000215190 . 106660612 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.150832546 knock down down-regulator 1.87E-16 REG00012 LINC00680 Long intergenic non-protein coding RNA 680 HGNC:44417 ENSG00000215190 . 106660612 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.80928196 knock down up-regulate 0.001995507 REG00012 LINC00682 Long intergenic non-protein coding RNA 682 HGNC:44466 ENSG00000245870 . 101927074 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.961136424 knock down up-regulate 3.59E-15 REG00012 BHLHE40-AS1 BHLHE40 antisense RNA 1 HGNC:44471 ENSG00000235831 . 100507582 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 BHLHE40-AS1 BHLHE40 antisense RNA 1 HGNC:44471 ENSG00000235831 . 100507582 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.847255195 knock down down-regulator 0.002758407 REG00012 THUMPD3-AS1 THUMPD3 antisense RNA 1 HGNC:44478 ENSG00000206573 . 440944 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CERS6-AS1 CERS6 antisense RNA 1 HGNC:44485 ENSG00000227617 . 100861402 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SH3BP5-AS1 SH3BP5 antisense RNA 1 HGNC:44501 ENSG00000224660 . 100505696 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SH3BP5-AS1 SH3BP5 antisense RNA 1 HGNC:44501 ENSG00000224660 . 100505696 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.943498453 knock down down-regulator 0.005546375 REG00012 SH3BP5-AS1 SH3BP5 antisense RNA 1 HGNC:44501 ENSG00000224660 . 100505696 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.543703975 knock down up-regulate 6.85E-05 REG00012 LINC00691 Long intergenic non-protein coding RNA 691 HGNC:44514 ENSG00000224074 . 152024 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 THRB-AS1 THRB antisense RNA 1 HGNC:44515 ENSG00000228791 . 644990 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 EIF1B-AS1 EIF1B antisense RNA 1 HGNC:44555 ENSG00000280739 . 440952 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 STT3A-AS1 STT3A antisense RNA 1 HGNC:44585 ENSG00000254671 . 105369550 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PTPRG-AS1 PTPRG antisense RNA 1 HGNC:44638 ENSG00000241472 . 100506994 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PTPRG-AS1 PTPRG antisense RNA 1 HGNC:44638 ENSG00000241472 . 100506994 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.31559438 knock down down-regulator 0.001823409 REG00012 PTPRG-AS1 PTPRG antisense RNA 1 HGNC:44638 ENSG00000241472 . 100506994 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.257419056 knock down down-regulator 0.002003441 REG00012 PITRM1-AS1 PITRM1 antisense RNA 1 HGNC:44675 ENSG00000237399 . 100507034 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MANCR Mitotically associated long non coding RNA HGNC:44678 ENSG00000231298 . 100216001 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.236903558 knock down down-regulator 0.038014683 REG00012 MANCR Mitotically associated long non coding RNA HGNC:44678 ENSG00000231298 . 100216001 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.672357881 knock down up-regulate 0.042905892 REG00012 MANCR Mitotically associated long non coding RNA HGNC:44678 ENSG00000231298 . 100216001 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.843732712 knock down up-regulate 0.02479451 REG00012 MANCR Mitotically associated long non coding RNA HGNC:44678 ENSG00000231298 . 100216001 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.186049045 knock down down-regulator 0.003517745 REG00012 MANCR Mitotically associated long non coding RNA HGNC:44678 ENSG00000231298 . 100216001 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.65973935 knock down up-regulate 0.024953919 REG00012 MANCR Mitotically associated long non coding RNA HGNC:44678 ENSG00000231298 . 100216001 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.987532088 knock down down-regulator 0.001590751 REG00012 MANCR Mitotically associated long non coding RNA HGNC:44678 ENSG00000231298 . 100216001 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.645023124 knock down down-regulator 0.007915146 REG00012 LINC00707 Long intergenic non-protein coding RNA 707 HGNC:44691 ENSG00000238266 . 100507127 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.880816707 knock down up-regulate 0.032890051 REG00012 LINC00707 Long intergenic non-protein coding RNA 707 HGNC:44691 ENSG00000238266 . 100507127 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.379651437 knock down up-regulate 4.12E-18 REG00012 LINC00707 Long intergenic non-protein coding RNA 707 HGNC:44691 ENSG00000238266 . 100507127 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.073211403 knock down up-regulate 0.011172893 REG00012 LINC00707 Long intergenic non-protein coding RNA 707 HGNC:44691 ENSG00000238266 . 100507127 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 2.556807733 knock down up-regulate 5.89E-140 REG00012 LINC00707 Long intergenic non-protein coding RNA 707 HGNC:44691 ENSG00000238266 . 100507127 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -2.363834553 knock down down-regulator 3.49E-05 REG00012 LINC00707 Long intergenic non-protein coding RNA 707 HGNC:44691 ENSG00000238266 . 100507127 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.052972099 knock down up-regulate 5.92E-12 REG00012 LINC00707 Long intergenic non-protein coding RNA 707 HGNC:44691 ENSG00000238266 . 100507127 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.925486455 knock down down-regulator 8.78E-06 REG00012 VIM-AS1 VIM antisense RNA 1 HGNC:44879 ENSG00000229124 . 100507347 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 VIM-AS1 VIM antisense RNA 1 HGNC:44879 ENSG00000229124 . 100507347 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.483842223 knock out down-regulator 0.011705986 REG00012 NEBL-AS1 NEBL antisense RNA 1 HGNC:44899 ENSG00000231920 . 100128511 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.676634031 knock down up-regulate 7.40E-07 REG00012 NEBL-AS1 NEBL antisense RNA 1 HGNC:44899 ENSG00000231920 . 100128511 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.588813818 knock down down-regulator 0.0027258 REG00012 LINC00838 Long intergenic non-protein coding RNA 838 HGNC:44963 ENSG00000261683 . 100505583 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PARD3-DT PARD3 divergent transcript HGNC:44964 ENSG00000226386 . 100505601 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.606307962 knock down up-regulate 0.029698907 REG00012 PARD3-DT PARD3 divergent transcript HGNC:44964 ENSG00000226386 . 100505601 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.662686209 knock down up-regulate 0.030051721 REG00012 PARD3-DT PARD3 divergent transcript HGNC:44964 ENSG00000226386 . 100505601 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.536920978 knock down down-regulator 0.019187377 REG00012 PRKG1-AS1 PRKG1 antisense RNA 1 HGNC:45029 ENSG00000236671 . 100506939 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.73869577 knock down down-regulator 0.001323095 REG00012 PRKG1-AS1 PRKG1 antisense RNA 1 HGNC:45029 ENSG00000236671 . 100506939 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.676122285 knock down down-regulator 0.039257335 REG00012 PYCARD-AS1 PYCARD antisense RNA 1 HGNC:45036 ENSG00000261359 PYAS1_HUMAN 100652740 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PYCARD-AS1 PYCARD antisense RNA 1 HGNC:45036 ENSG00000261359 PYAS1_HUMAN 100652740 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.722349979 knock down down-regulator 0.007467766 REG00012 PYCARD-AS1 PYCARD antisense RNA 1 HGNC:45036 ENSG00000261359 PYAS1_HUMAN 100652740 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.786422052 knock down down-regulator 0.002634421 REG00012 NPTN-IT1 NPTN intronic transcript 1 HGNC:45091 ENSG00000281183 . 101241892 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NPTN-IT1 NPTN intronic transcript 1 HGNC:45091 ENSG00000281183 . 101241892 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.938679811 knock down up-regulate 0.004272506 REG00012 NPTN-IT1 NPTN intronic transcript 1 HGNC:45091 ENSG00000281183 . 101241892 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.202063689 knock down up-regulate 0.001318929 REG00012 NPTN-IT1 NPTN intronic transcript 1 HGNC:45091 ENSG00000281183 . 101241892 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.688045489 knock down up-regulate 0.017569744 REG00012 NPTN-IT1 NPTN intronic transcript 1 HGNC:45091 ENSG00000281183 . 101241892 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.691201559 knock down up-regulate 0.003336536 REG00012 NPTN-IT1 NPTN intronic transcript 1 HGNC:45091 ENSG00000281183 . 101241892 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.744167446 knock down up-regulate 0.046006154 REG00012 NPTN-IT1 NPTN intronic transcript 1 HGNC:45091 ENSG00000281183 . 101241892 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.021229414 knock down up-regulate 0.008290019 REG00012 ZSWIM8-AS1 ZSWIM8 antisense RNA 1 HGNC:45103 ENSG00000272589 . 100507331 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DLG5-AS1 DLG5 antisense RNA 1 HGNC:45109 ENSG00000233871 . 100128292 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00857 Long intergenic non-protein coding RNA 857 HGNC:45114 ENSG00000237523 . 439990 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.925956195 knock down up-regulate 0.000134908 REG00012 LINC00857 Long intergenic non-protein coding RNA 857 HGNC:45114 ENSG00000237523 . 439990 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.69956849 knock down down-regulator 4.49E-08 REG00012 LINC00857 Long intergenic non-protein coding RNA 857 HGNC:45114 ENSG00000237523 . 439990 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.650702114 knock down up-regulate 0.010998522 REG00012 ADIRF-AS1 ADIRF antisense RNA 1 HGNC:45127 ENSG00000272734 . 100133190 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.882168894 knock out up-regulate 7.55E-08 REG00012 CCAT1 Colon cancer associated transcript 1 HGNC:45128 . . 100507056 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CASC8 Cancer susceptibility 8 HGNC:45129 ENSG00000246228 . 727677 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.7427864 knock out up-regulate 3.20E-05 REG00012 NUTM2A-AS1 NUTM2A antisense RNA 1 HGNC:45161 ENSG00000223482 . 728190 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.887047695 knock down down-regulator 5.69E-06 REG00012 NUTM2A-AS1 NUTM2A antisense RNA 1 HGNC:45161 ENSG00000223482 . 728190 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.943741168 knock down down-regulator 0.001626386 REG00012 LINC00863 Long intergenic non-protein coding RNA 863 HGNC:45162 ENSG00000224914 . 439994 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.610130523 knock down down-regulator 6.21E-05 REG00012 ACTA2-AS1 ACTA2 antisense RNA 1 HGNC:45169 ENSG00000180139 . 100132116 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ACTA2-AS1 ACTA2 antisense RNA 1 HGNC:45169 ENSG00000180139 . 100132116 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.000213514 knock down up-regulate 0.008855854 REG00012 ACTA2-AS1 ACTA2 antisense RNA 1 HGNC:45169 ENSG00000180139 . 100132116 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.657952745 knock down up-regulate 0.000346531 REG00012 LINC00865 Long intergenic non-protein coding RNA 865 HGNC:45170 ENSG00000232229 . 643529 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TNKS2-DT TNKS2 divergent transcript HGNC:45173 ENSG00000228701 . 100507633 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -2.671674925 knock out down-regulator 1.69E-05 REG00012 ENTPD1-AS1 ENTPD1 antisense RNA 1 HGNC:45203 ENSG00000226688 . 728558 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.800158798 knock down down-regulator 0.000266546 REG00012 ENTPD1-AS1 ENTPD1 antisense RNA 1 HGNC:45203 ENSG00000226688 . 728558 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.602331273 knock down up-regulate 0.013280109 REG00012 ENTPD1-AS1 ENTPD1 antisense RNA 1 HGNC:45203 ENSG00000226688 . 728558 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.757460644 knock down down-regulator 0.000324423 REG00012 ENTPD1-AS1 ENTPD1 antisense RNA 1 HGNC:45203 ENSG00000226688 . 728558 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.530146189 knock down down-regulator 0.000369315 REG00012 GOLGA7B-DT GOLGA7B divergent transcript HGNC:45232 ENSG00000227356 . 100505561 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.149813466 knock out up-regulate 0.040853184 REG00012 SH3PXD2A-AS1 SH3PXD2A antisense RNA 1 HGNC:45242 ENSG00000280693 . 100505839 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CFAP58-DT CFAP58 divergent transcript HGNC:45243 ENSG00000231233 . 100505869 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.727507453 knock out up-regulate 0.000212088 REG00012 FAM95C family with sequence similarity 95 member C HGNC:45272 ENSG00000283486 . 100289137 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NDUFA6-AS1 NDUFA6 divergent transcript HGNC:45273 ENSG00000237037 . 100132273 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 H19 H19 imprinted maternally expressed transcript HGNC:4713 ENSG00000130600 . 283120 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.683985541 knock down up-regulate 3.09E-24 REG00012 H19 H19 imprinted maternally expressed transcript HGNC:4713 ENSG00000130600 . 283120 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.698372536 knock down up-regulate 6.08E-36 REG00012 EML2-AS1 EML2 antisense RNA 1 HGNC:48331 ENSG00000267757 . 100287177 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.720937468 knock out up-regulate 0.00184264 REG00012 EML2-AS1 EML2 antisense RNA 1 HGNC:48331 ENSG00000267757 . 100287177 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.830854705 knock down up-regulate 0.001352183 REG00012 EML2-AS1 EML2 antisense RNA 1 HGNC:48331 ENSG00000267757 . 100287177 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.283840588 knock down up-regulate 0.000767279 REG00012 EML2-AS1 EML2 antisense RNA 1 HGNC:48331 ENSG00000267757 . 100287177 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.789657061 knock down down-regulator 0.007721684 REG00012 EML2-AS1 EML2 antisense RNA 1 HGNC:48331 ENSG00000267757 . 100287177 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.164116525 knock down up-regulate 4.62E-05 REG00012 C5orf66 PITX1 antisense RNA 1 HGNC:48332 ENSG00000224186 . 100996485 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PITX1-AS1 PITX1 antisense RNA 1 HGNC:48332 ENSG00000224186 . 100996485 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.71602459 knock down down-regulator 0.001122868 REG00012 PITX1-AS1 PITX1 antisense RNA 1 HGNC:48332 ENSG00000224186 . 100996485 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.03507153 knock down up-regulate 0.002499443 REG00012 PITX1-AS1 PITX1 antisense RNA 1 HGNC:48332 ENSG00000224186 . 100996485 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.545454464 knock down down-regulator 0.002193997 REG00012 PITX1-AS1 PITX1 antisense RNA 1 HGNC:48332 ENSG00000224186 . 100996485 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.862340275 knock down up-regulate 0.0035857 REG00012 CTBP1-AS CTBP1 antisense RNA HGNC:48337 ENSG00000280927 . 285463 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.056920137 knock down down-regulator 4.54E-05 REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.745605558 knock out up-regulate 9.38E-06 REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.000515482 knock down down-regulator 0.000924826 REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.747447323 knock down down-regulator 0.000172985 REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.032257075 knock down up-regulate 0.000971663 REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.964099714 knock down down-regulator 4.10E-05 REG00012 LUCAT1 Lung cancer associated transcript 1 HGNC:48498 ENSG00000248323 . 100505994 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.44116452 knock down up-regulate 1.11E-05 REG00012 LINC00884 ATP13A3 divergent transcript HGNC:48570 ENSG00000233058 . 401106 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00886 Long intergenic non-protein coding RNA 886 HGNC:48572 ENSG00000240875 . 730091 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.710366184 knock out up-regulate 0.010599241 REG00012 LINC00886 Long intergenic non-protein coding RNA 886 HGNC:48572 ENSG00000240875 . 730091 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.365253231 knock down up-regulate 2.06E-06 REG00012 LINC00886 Long intergenic non-protein coding RNA 886 HGNC:48572 ENSG00000240875 . 730091 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.704379146 knock down up-regulate 0.011198752 REG00012 EOLA2-DT EOLA2 divergent transcript HGNC:48579 ENSG00000235703 . 100272228 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -4.968487994 knock down down-regulator 0.000150696 REG00012 EOLA2-DT EOLA2 divergent transcript HGNC:48579 ENSG00000235703 . 100272228 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.60523607 knock down down-regulator 0.034172702 REG00012 EOLA2-DT EOLA2 divergent transcript HGNC:48579 ENSG00000235703 . 100272228 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.806103332 knock down down-regulator 0.001855735 REG00012 EOLA2-DT EOLA2 divergent transcript HGNC:48579 ENSG00000235703 . 100272228 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.051238381 knock down down-regulator 0.0008174 REG00012 LINC00899 Long intergenic non-protein coding RNA 899 HGNC:48583 ENSG00000231711 . 100271722 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.62322306 knock down up-regulate 0.000379896 REG00012 CLIP1-AS1 CLIP1 antisense RNA 1 HGNC:48586 ENSG00000257097 . 100507066 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PRC1-AS1 PRC1 antisense RNA 1 HGNC:48587 ENSG00000258725 . 100507118 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NRAV Negative regulator of antiviral response HGNC:48588 ENSG00000248008 . 100506668 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.701067157 knock down up-regulate 0.000500485 REG00012 LIPE-AS1 LIPE antisense RNA 1 HGNC:48589 ENSG00000213904 . 100996307 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SNHG17 Small nucleolar RNA host gene 17 HGNC:48600 ENSG00000196756 . 388796 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.10472785 knock down down-regulator 0.007895186 REG00012 SNHG17 Small nucleolar RNA host gene 17 HGNC:48600 ENSG00000196756 . 388796 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.928395474 knock down down-regulator 0.017844276 REG00012 VAC14-AS1 VAC14 antisense RNA 1 HGNC:48605 ENSG00000214353 . 100130894 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 VAC14-AS1 VAC14 antisense RNA 1 HGNC:48605 ENSG00000214353 . 100130894 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.80509301 knock down down-regulator 0.001636014 REG00012 VAC14-AS1 VAC14 antisense RNA 1 HGNC:48605 ENSG00000214353 . 100130894 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.784974848 knock down up-regulate 0.001041997 REG00012 UBL7-DT UBL7 divergent transcript HGNC:48614 ENSG00000247240 . 440288 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.022979247 knock down down-regulator 0.039053745 REG00012 UBL7-DT UBL7 divergent transcript HGNC:48614 ENSG00000247240 . 440288 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -3.007820404 knock down down-regulator 9.02E-05 REG00012 EIF3J-AS1 EIF3J divergent transcript HGNC:48616 ENSG00000179523 . 645212 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SRP14-AS1 SRP14 divergent transcript HGNC:48619 ENSG00000248508 . 100131089 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SRP14-DT SRP14 divergent transcript HGNC:48619 ENSG00000248508 . 100131089 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.734677144 knock down down-regulator 0.036324294 REG00012 SRP14-DT SRP14 divergent transcript HGNC:48619 ENSG00000248508 . 100131089 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.867939872 knock down down-regulator 0.004268081 REG00012 SRP14-DT SRP14 divergent transcript HGNC:48619 ENSG00000248508 . 100131089 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.135759811 knock down down-regulator 0.003189893 REG00012 SRP14-DT SRP14 divergent transcript HGNC:48619 ENSG00000248508 . 100131089 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.803625541 knock down down-regulator 0.000849384 REG00012 SRP14-DT SRP14 divergent transcript HGNC:48619 ENSG00000248508 . 100131089 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.067022739 knock down down-regulator 0.0147435 REG00012 RAD51-AS1 RAD51 antisense RNA 1 HGNC:48621 ENSG00000245849 . 100505648 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 RAD51-AS1 RAD51 antisense RNA 1 HGNC:48621 ENSG00000245849 . 100505648 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.953182734 knock down down-regulator 0.006047065 REG00012 NR2F1-AS1 NR2F1 antisense RNA 1 HGNC:48622 ENSG00000237187 . 441094 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.602872086 knock down up-regulate 0.009188786 REG00012 NR2F1-AS1 NR2F1 antisense RNA 1 HGNC:48622 ENSG00000237187 . 441094 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.640205904 knock down up-regulate 0.030780194 REG00012 LINC01578 CHD2 adjacent suppressive regulatory RNA HGNC:48626 ENSG00000272888 . 100507217 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CHASERR CHD2 adjacent suppressive regulatory RNA HGNC:48626 ENSG00000272888 . 100507217 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.714469619 knock down up-regulate 0.021441709 REG00012 CHASERR CHD2 adjacent suppressive regulatory RNA HGNC:48626 ENSG00000272888 . 100507217 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.59295967 knock down down-regulator 0.021527278 REG00012 CHASERR CHD2 adjacent suppressive regulatory RNA HGNC:48626 ENSG00000272888 . 100507217 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.716776505 knock down up-regulate 0.003838923 REG00012 CHASERR CHD2 adjacent suppressive regulatory RNA HGNC:48626 ENSG00000272888 . 100507217 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.268230569 knock down down-regulator 0.036840628 REG00012 LINC00937 Long intergenic non-protein coding RNA 937 HGNC:48629 ENSG00000226091 . 389634 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00938 Long intergenic non-protein coding RNA 938 HGNC:48630 ENSG00000273015 . 400027 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00938 Long intergenic non-protein coding RNA 938 HGNC:48630 ENSG00000273015 . 400027 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.592707504 knock down down-regulator 5.08E-05 REG00012 LINC00938 Long intergenic non-protein coding RNA 938 HGNC:48630 ENSG00000273015 . 400027 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.774984236 knock down up-regulate 0.016882387 REG00012 AGAP2-AS1 AGAP2 antisense RNA 1 HGNC:48633 ENSG00000255737 . 100130776 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00940 Long intergenic non-protein coding RNA 940 HGNC:48634 ENSG00000235049 . 100271702 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00941 Long intergenic non-protein coding RNA 941 HGNC:48635 ENSG00000235884 . 100287314 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.390195615 knock down down-regulator 5.93E-05 REG00012 LINC00941 Long intergenic non-protein coding RNA 941 HGNC:48635 ENSG00000235884 . 100287314 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.126752325 knock down down-regulator 0.000364141 REG00012 LINC00941 Long intergenic non-protein coding RNA 941 HGNC:48635 ENSG00000235884 . 100287314 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.574228018 knock down down-regulator 2.10E-05 REG00012 LINC00941 Long intergenic non-protein coding RNA 941 HGNC:48635 ENSG00000235884 . 100287314 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.803274351 knock down up-regulate 0.006577673 REG00012 LINC00942 Long intergenic non-protein coding RNA 942 HGNC:48636 ENSG00000249628 . 100292680 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00942 Long intergenic non-protein coding RNA 942 HGNC:48636 ENSG00000249628 . 100292680 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.859698052 knock down down-regulator 0.000545981 REG00012 GSEC G-quadruplex forming sequence containing lncRNA HGNC:48645 ENSG00000280832 . 399972 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.76885679 knock out up-regulate 0.002624374 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.049186793 knock down down-regulator 1.99E-08 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.611854392 knock down down-regulator 0.001071208 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.168695741 knock down up-regulate 8.81E-05 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.677261901 knock down up-regulate 1.33E-07 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.75724512 knock down up-regulate 3.03E-07 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 2.083170116 knock down up-regulate 3.01E-05 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 4.852716844 knock down up-regulate 0.010684821 REG00012 ZBED5-AS1 ZBED5 antisense RNA 1 HGNC:48646 ENSG00000247271 . 729013 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.698257041 knock down down-regulator 1.24E-05 REG00012 MIR181A1HG MIR181A1 host gene HGNC:48659 ENSG00000229989 . 100131234 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.995500859 knock down down-regulator 0.041172738 REG00012 MIR181A1HG MIR181A1 host gene HGNC:48659 ENSG00000229989 . 100131234 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 2.083322575 knock down up-regulate 0.001696909 REG00012 RGMB-AS1 RGMB antisense RNA 1 HGNC:48666 ENSG00000246763 . 503569 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RGMB-AS1 RGMB antisense RNA 1 HGNC:48666 ENSG00000246763 . 503569 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.897257223 knock down down-regulator 0.043080112 REG00012 RGMB-AS1 RGMB antisense RNA 1 HGNC:48666 ENSG00000246763 . 503569 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.368589926 knock down up-regulate 0.029799104 REG00012 WEE2-AS1 WEE2 antisense RNA 1 HGNC:48669 ENSG00000228775 . 285962 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.735941353 knock down down-regulator 2.06E-05 REG00012 LINC00958 Long intergenic non-protein coding RNA 958 HGNC:48671 ENSG00000251381 . 100506305 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RAB30-AS1 RAB30 divergent transcript HGNC:48672 ENSG00000246067 . 100506233 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 RAB30-DT RAB30 divergent transcript HGNC:48672 ENSG00000246067 . 100506233 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.372776645 knock down down-regulator 0.000161223 REG00012 RAB30-DT RAB30 divergent transcript HGNC:48672 ENSG00000246067 . 100506233 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.852529702 knock down down-regulator 0.01486339 REG00012 NCAM1-AS1 NCAM1 antisense RNA1 HGNC:48675 ENSG00000227487 . 100288346 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 KCNIP2-AS1 KCNIP2 antisense RNA 1 HGNC:48680 ENSG00000226009 . 100289509 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 KCNIP2-AS1 KCNIP2 antisense RNA 1 HGNC:48680 ENSG00000226009 . 100289509 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.592710465 knock down down-regulator 1.53E-11 REG00012 KCNIP2-AS1 KCNIP2 antisense RNA 1 HGNC:48680 ENSG00000226009 . 100289509 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.280824019 knock down down-regulator 0.000194485 REG00012 ADD3-AS1 ADD3 antisense RNA 1 HGNC:48682 ENSG00000203876 . 100505933 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00960 Long intergenic non-protein coding RNA 960 HGNC:48710 ENSG00000242516 . 401074 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MAN1B1-AS1 MAN1B1 divergent transcript HGNC:48715 ENSG00000268996 . 100289341 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.91636347 knock down down-regulator 9.20E-05 REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.684265328 knock down down-regulator 0.002092366 REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.856087601 knock down up-regulate 5.52E-05 REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.900256413 knock down up-regulate 0.002450232 REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.632185319 knock down down-regulator 0.000235384 REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.359086003 knock down down-regulator 2.21E-06 REG00012 LINC00963 Long intergenic non-protein coding RNA 963 HGNC:48716 ENSG00000204054 . 100506190 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.888790843 knock down up-regulate 0.000970563 REG00012 RBPMS-AS1 RBPMS antisense RNA 1 HGNC:48721 ENSG00000254109 . 100128750 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RBPMS-AS1 RBPMS antisense RNA 1 HGNC:48721 ENSG00000254109 . 100128750 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.759825272 knock down down-regulator 0.044623797 REG00012 RBPMS-AS1 RBPMS antisense RNA 1 HGNC:48721 ENSG00000254109 . 100128750 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.377385365 knock down down-regulator 0.016878189 REG00012 RBPMS-AS1 RBPMS antisense RNA 1 HGNC:48721 ENSG00000254109 . 100128750 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.598994748 knock down down-regulator 0.011872119 REG00012 RBPMS-AS1 RBPMS antisense RNA 1 HGNC:48721 ENSG00000254109 . 100128750 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.741342359 knock down down-regulator 0.001711213 REG00012 LINC00967 Long intergenic non-protein coding RNA 967 HGNC:48725 ENSG00000253138 . 100505659 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.589542654 knock down down-regulator 5.36E-07 REG00012 YTHDF3-DT YTHDF3 divergent transcript HGNC:48728 ENSG00000270673 . 101410533 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.857330374 knock down down-regulator 2.47E-07 REG00012 YTHDF3-DT YTHDF3 divergent transcript HGNC:48728 ENSG00000270673 . 101410533 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.691582634 knock down down-regulator 0.035906025 REG00012 YTHDF3-DT YTHDF3 divergent transcript HGNC:48728 ENSG00000270673 . 101410533 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.63693173 knock down up-regulate 1.55E-06 REG00012 GLIDR Glioblastoma down-regulated RNA HGNC:48823 ENSG00000278175 . 389741 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.595892139 knock down down-regulator 4.45E-37 REG00012 PCAT7 Prostate cancer associated transcript 7 HGNC:48824 ENSG00000231806 . 101928099 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.656706619 knock down down-regulator 0.013603251 REG00012 PCAT7 Prostate cancer associated transcript 7 HGNC:48824 ENSG00000231806 . 101928099 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.970164855 knock down down-regulator 0.006899154 REG00012 CAPN10-AS1 CAPN10 divergent transcript HGNC:48839 ENSG00000260942 . 101752400 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GATA6-AS1 GATA6 antisense RNA 1 (head to head) HGNC:48840 ENSG00000266010 . 100128893 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.208591547 knock down up-regulate 1.07E-21 REG00012 GATA6-AS1 GATA6 antisense RNA 1 (head to head) HGNC:48840 ENSG00000266010 . 100128893 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.921592469 knock down up-regulate 0.00319878 REG00012 LINC00973 Long intergenic non-protein coding RNA 973 HGNC:48868 ENSG00000240476 . 100506377 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.633058768 knock down up-regulate 7.77E-05 REG00012 LINC00973 Long intergenic non-protein coding RNA 973 HGNC:48868 ENSG00000240476 . 100506377 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.429672607 knock down up-regulate 2.65E-06 REG00012 LINC00973 Long intergenic non-protein coding RNA 973 HGNC:48868 ENSG00000240476 . 100506377 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.680286713 knock down down-regulator 0.000283532 REG00012 LINC00973 Long intergenic non-protein coding RNA 973 HGNC:48868 ENSG00000240476 . 100506377 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.978563252 knock down up-regulate 0.000748575 REG00012 RBM5-AS1 RBM5 antisense RNA 1 HGNC:48871 ENSG00000281691 . 100775107 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CASC9 Cancer susceptibility 9 HGNC:48906 ENSG00000249395 . 101805492 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.234508359 knock down down-regulator 0.001671888 REG00012 CASC9 Cancer susceptibility 9 HGNC:48906 ENSG00000249395 . 101805492 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.594122793 knock down up-regulate 0.001666282 REG00012 TMEM5-AS1 RXYLT1 antisense RNA 1 HGNC:48910 ENSG00000255850 . 104169670 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RXYLT1-AS1 RXYLT1 antisense RNA 1 HGNC:48910 ENSG00000255850 . 104169670 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.369326914 knock down up-regulate 0.009926396 REG00012 VPS9D1-AS1 VPS9D1 antisense RNA 1 HGNC:48915 ENSG00000261373 . 100128881 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.931764494 knock down down-regulator 7.42E-06 REG00012 VPS9D1-AS1 VPS9D1 antisense RNA 1 HGNC:48915 ENSG00000261373 . 100128881 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.738609377 knock down down-regulator 1.90E-06 REG00012 VPS9D1-AS1 VPS9D1 antisense RNA 1 HGNC:48915 ENSG00000261373 . 100128881 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.97416918 knock down down-regulator 2.41E-14 REG00012 ASAP1-IT2 ASAP1 intronic transcript 2 HGNC:48917 ENSG00000280543 . 100507117 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC00992 Long intergenic non-protein coding RNA 992 HGNC:48943 ENSG00000248663 . 728342 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.746500834 knock down up-regulate 9.69E-05 REG00012 LINC00992 Long intergenic non-protein coding RNA 992 HGNC:48943 ENSG00000248663 . 728342 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.577138836 knock down down-regulator 1.18E-05 REG00012 LINC00994 Long intergenic non-protein coding RNA 994 HGNC:48949 ENSG00000189196 . 100287879 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.739202082 knock down down-regulator 0.001734725 REG00012 LINC00994 Long intergenic non-protein coding RNA 994 HGNC:48949 ENSG00000189196 . 100287879 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.717360454 knock down down-regulator 0.000123393 REG00012 LINC00997 Long intergenic non-protein coding RNA 997 HGNC:48952 ENSG00000281332 . 401321 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MNX1-AS1 MNX1 antisense RNA 1 (head to head) HGNC:48954 ENSG00000243479 . 645249 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.937917934 knock down up-regulate 0.000783488 REG00012 MNX1-AS1 MNX1 antisense RNA 1 (head to head) HGNC:48954 ENSG00000243479 . 645249 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.937917934 knock down up-regulate 0.000783488 REG00012 PAXIP1-AS2 PAXIP1 antisense RNA 2 HGNC:48958 ENSG00000214106 . 100132707 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 KDM7A-DT KDM7A divergent transcript HGNC:48959 ENSG00000260231 . 100134229 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.587548055 knock down up-regulate 6.28E-05 REG00012 KDM7A-DT KDM7A divergent transcript HGNC:48959 ENSG00000260231 . 100134229 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.598119048 knock down down-regulator 1.45E-05 REG00012 KDM7A-DT KDM7A divergent transcript HGNC:48959 ENSG00000260231 . 100134229 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.517069359 knock down down-regulator 2.83E-05 REG00012 LINC01004 Long intergenic non-protein coding RNA 1004 HGNC:48961 ENSG00000228393 . 100216546 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01004 Long intergenic non-protein coding RNA 1004 HGNC:48961 ENSG00000228393 . 100216546 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.51455374 knock down down-regulator 0.040216407 REG00012 LINC01004 Long intergenic non-protein coding RNA 1004 HGNC:48961 ENSG00000228393 . 100216546 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.998144916 knock down down-regulator 0.027527642 REG00012 LINC01006 RNF32 divergent transcript HGNC:48971 ENSG00000182648 R32DT_HUMAN 100506380 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RNF32-DT RNF32 divergent transcript HGNC:48971 ENSG00000182648 R32DT_HUMAN 100506380 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.694679747 knock down down-regulator 0.001171893 REG00012 RNF32-DT RNF32 divergent transcript HGNC:48971 ENSG00000182648 R32DT_HUMAN 100506380 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.011556442 knock down up-regulate 0.003672243 REG00012 TRG-AS1 T cell receptor gamma locus antisense RNA 1 HGNC:48974 ENSG00000281103 . 100506776 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 HMGN3-AS1 HMGN3 antisense RNA 1 HGNC:48984 ENSG00000270362 . 100288198 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -4.746581784 knock down down-regulator 0.021755899 REG00012 HMGN3-AS1 HMGN3 antisense RNA 1 HGNC:48984 ENSG00000270362 . 100288198 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.595734767 knock down up-regulate 0.015757946 REG00012 LOC100507557 EPM2A divergent transcript HGNC:48990 ENSG00000235652 . 100507557 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 GMDS-AS1 GMDS divergent transcript HGNC:48993 ENSG00000250903 . 100508120 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RAET1E-AS1 RAET1E antisense RNA 1 HGNC:48994 ENSG00000223701 . 100652739 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RAET1E-AS1 RAET1E antisense RNA 1 HGNC:48994 ENSG00000223701 . 100652739 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.870579935 knock down down-regulator 0.005057224 REG00012 RAET1E-AS1 RAET1E antisense RNA 1 HGNC:48994 ENSG00000223701 . 100652739 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.022121021 knock down down-regulator 0.028243647 REG00012 LINC01021 P53 upregulated regulator of p53 levels HGNC:48995 ENSG00000250337 . 643401 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CKMT2-AS1 CKMT2 antisense RNA 1 HGNC:48997 ENSG00000247572 . 100131067 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.15701739 knock down down-regulator 0.031540253 REG00012 CKMT2-AS1 CKMT2 antisense RNA 1 HGNC:48997 ENSG00000247572 . 100131067 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.959563034 knock down down-regulator 0.00046278 REG00012 GRPEL2-AS1 GRPEL2 antisense RNA 1 HGNC:48999 ENSG00000253618 . 106144529 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NNT-AS1 NNT antisense RNA 1 HGNC:49005 ENSG00000248092 . 100652772 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NNT-AS1 NNT antisense RNA 1 HGNC:49005 ENSG00000248092 . 100652772 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.659899556 knock down up-regulate 0.004765528 REG00012 NNT-AS1 NNT antisense RNA 1 HGNC:49005 ENSG00000248092 . 100652772 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.663229133 knock down up-regulate 0.00150738 REG00012 TRIM52-AS1 TRIM52 antisense RNA 1 (head to head) HGNC:49006 ENSG00000248275 . 100507602 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TRIM52-AS1 TRIM52 antisense RNA 1 (head to head) HGNC:49006 ENSG00000248275 . 100507602 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.332732088 knock down up-regulate 0.020910997 REG00012 SNHG18 Small nucleolar RNA host gene 18 HGNC:49007 ENSG00000250786 . 100505806 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.090114925 knock down down-regulator 0.005131379 REG00012 SNHG18 Small nucleolar RNA host gene 18 HGNC:49007 ENSG00000250786 . 100505806 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.626908121 knock down down-regulator 0.023380332 REG00012 LINC01024 Mitosis associated long intergenic non-coding RNA 1 HGNC:49009 ENSG00000245146 . 100505636 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01030 Long intergenic non-protein coding RNA 1030 HGNC:49016 ENSG00000253799 . 101937451 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01030 Long intergenic non-protein coding RNA 1030 HGNC:49016 ENSG00000253799 . 101937451 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.652833807 knock down up-regulate 0.032643745 REG00012 LINC01030 Long intergenic non-protein coding RNA 1030 HGNC:49016 ENSG00000253799 . 101937451 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.028547144 knock down down-regulator 0.011008204 REG00012 LINC01030 Long intergenic non-protein coding RNA 1030 HGNC:49016 ENSG00000253799 . 101937451 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.757943627 knock down up-regulate 0.007160671 REG00012 LINC01031 Long intergenic non-protein coding RNA 1031 HGNC:49017 ENSG00000232077 . 101929184 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01039 Long intergenic non-protein coding RNA 1039 HGNC:49027 ENSG00000234168 . 104355149 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01054 Long intergenic non-protein coding RNA 1054 HGNC:49048 ENSG00000229723 . 104355150 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 HHLA3 HERV-H LTR-associating 3 HGNC:4906 ENSG00000197568 HHLA3_HUMAN 11147 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 HHLA3 HERV-H LTR-associating 3 HGNC:4906 ENSG00000197568 HHLA3_HUMAN 11147 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.092720399 knock down down-regulator 0.008372807 REG00012 HHLA3 HERV-H LTR-associating 3 HGNC:4906 ENSG00000197568 HHLA3_HUMAN 11147 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.231312635 knock down up-regulate 0.000561461 REG00012 HHLA3 HERV-H LTR-associating 3 HGNC:4906 ENSG00000197568 HHLA3_HUMAN 11147 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.32564227 knock down up-regulate 0.031567962 REG00012 HHLA3 HERV-H LTR-associating 3 HGNC:4906 ENSG00000197568 HHLA3_HUMAN 11147 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.250993025 knock down down-regulator 0.000499594 REG00012 HHLA3 HERV-H LTR-associating 3 HGNC:4906 ENSG00000197568 HHLA3_HUMAN 11147 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.921356928 knock down up-regulate 0.002432815 REG00012 HHLA3 HERV-H LTR-associating 3 HGNC:4906 ENSG00000197568 HHLA3_HUMAN 11147 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.548477133 knock down up-regulate 0.006065906 REG00012 TMCC1-DT TMCC1 divergent transcript HGNC:49060 ENSG00000271270 . 100507032 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -3.40798806 knock down down-regulator 1.24E-05 REG00012 TMCC1-DT TMCC1 divergent transcript HGNC:49060 ENSG00000271270 . 100507032 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.808042071 knock down down-regulator 2.97E-06 REG00012 TMCC1-DT TMCC1 divergent transcript HGNC:49060 ENSG00000271270 . 100507032 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.724274885 knock down down-regulator 0.009865644 REG00012 NBAT1 Neuroblastoma associated transcript 1 HGNC:49075 ENSG00000260455 . 729177 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.602943088 knock down down-regulator 0.003153736 REG00012 SEMA3B-AS1 SEMA3B antisense RNA 1 (head to head) HGNC:49096 ENSG00000232352 . 101928931 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SEMA3B-AS1 SEMA3B antisense RNA 1 (head to head) HGNC:49096 ENSG00000232352 . 101928931 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 3.609620897 knock down up-regulate 1.67E-05 REG00012 SEMA3B-AS1 SEMA3B antisense RNA 1 (head to head) HGNC:49096 ENSG00000232352 . 101928931 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 5.083562688 knock down up-regulate 6.50E-07 REG00012 LINC01068 Long intergenic non-protein coding RNA 1068 HGNC:49106 ENSG00000227676 . 103724388 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TUSC8 Tumor suppressor candidate 8 HGNC:49111 ENSG00000237361 . 400128 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TUSC8 Tumor suppressor candidate 8 HGNC:49111 ENSG00000237361 . 400128 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.825679334 knock down down-regulator 0.012843725 REG00012 TUSC8 Tumor suppressor candidate 8 HGNC:49111 ENSG00000237361 . 400128 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.734523913 knock down down-regulator 0.000104966 REG00012 LINC01072 Long intergenic non-protein coding RNA 1072 HGNC:49112 ENSG00000236076 . 104355137 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01078 Long intergenic non-protein coding RNA 1078 HGNC:49121 ENSG00000223880 . 106144536 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PWAR6 Prader Willi/Angelman region RNA 6 HGNC:49129 ENSG00000257151 . 100506965 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.281 knock down up-regulate 4.35E-07 REG00012 PWAR6 Prader Willi/Angelman region RNA 6 HGNC:49129 ENSG00000257151 . 100506965 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.8424 knock down down-regulator 0.01983 REG00012 PWAR6 Prader Willi/Angelman region RNA 6 HGNC:49129 ENSG00000257151 . 100506965 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.5857 knock down up-regulate 0.04718 REG00012 KBTBD11-OT1 KBTBD11 overlapping transcript 1 HGNC:49147 ENSG00000253696 . 104266957 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 KBTBD11-OT1 KBTBD11 overlapping transcript 1 HGNC:49147 ENSG00000253696 . 104266957 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.745559005 knock out up-regulate 0.001385245 REG00012 HMMR-AS1 HMMR antisense RNA 1 HGNC:49149 ENSG00000251018 . 101927813 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PCBP2-OT1 PCBP2 overlapping transcript 1 HGNC:49150 ENSG00000282977 . 102157401 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 OR2A1-AS1 OR2A1 antisense RNA 1 HGNC:49168 ENSG00000244479 . 101928492 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01094 Long intergenic non-protein coding RNA 1094 HGNC:49219 ENSG00000251442 . 100505702 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.034321415 knock out up-regulate 0.027595072 REG00012 EMC3-AS1 EMC3 antisense RNA 1 HGNC:49223 ENSG00000180385 . 442075 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 EMC3-AS1 EMC3 antisense RNA 1 HGNC:49223 ENSG00000180385 . 442075 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.313126958 knock down down-regulator 0.000944508 REG00012 EMC3-AS1 EMC3 antisense RNA 1 HGNC:49223 ENSG00000180385 . 442075 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.72879389 knock down down-regulator 0.00326319 REG00012 EMC3-AS1 EMC3 antisense RNA 1 HGNC:49223 ENSG00000180385 . 442075 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.294068274 knock down down-regulator 0.000120235 REG00012 EMC3-AS1 EMC3 antisense RNA 1 HGNC:49223 ENSG00000180385 . 442075 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.201357121 knock down down-regulator 0.002232307 REG00012 LINC01116 Long intergenic non-protein coding RNA 1116 HGNC:49259 ENSG00000163364 . 375295 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.923925631 knock out down-regulator 0.003208109 REG00012 LINC01117 Long intergenic non-protein coding RNA 1117 HGNC:49260 ENSG00000224577 . 102724224 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.620548452 knock down down-regulator 0.001137336 REG00012 LINC01117 Long intergenic non-protein coding RNA 1117 HGNC:49260 ENSG00000224577 . 102724224 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.662206257 knock out down-regulator 0.002227998 REG00012 LINC01117 Long intergenic non-protein coding RNA 1117 HGNC:49260 ENSG00000224577 . 102724224 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.812882601 knock down down-regulator 0.012593058 REG00012 LINC01118 Long intergenic non-protein coding RNA 1118 HGNC:49261 ENSG00000222005 . 388948 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01118 Long intergenic non-protein coding RNA 1118 HGNC:49261 ENSG00000222005 . 388948 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.131910762 knock down down-regulator 0.010700038 REG00012 LINC01118 Long intergenic non-protein coding RNA 1118 HGNC:49261 ENSG00000222005 . 388948 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.553717413 knock down up-regulate 0.001018639 REG00012 LINC01118 Long intergenic non-protein coding RNA 1118 HGNC:49261 ENSG00000222005 . 388948 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.087700424 knock down up-regulate 0.007388433 REG00012 LINC01119 Long intergenic non-protein coding RNA 1119 HGNC:49262 ENSG00000239332 . 100134259 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.080747251 knock down down-regulator 0.038456162 REG00012 LINC01123 Long intergenic non-protein coding RNA 1123 HGNC:49269 ENSG00000204588 . 440894 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.324484808 knock down up-regulate 0.040698865 REG00012 LINC01123 Long intergenic non-protein coding RNA 1123 HGNC:49269 ENSG00000204588 . 440894 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.816442169 knock down up-regulate 0.038530013 REG00012 LINC01124 Long intergenic non-protein coding RNA 1124 HGNC:49270 ENSG00000222033 . 440925 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PAX8-AS1 PAX8 antisense RNA 1 HGNC:49271 ENSG00000189223 . 654433 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01126 Long intergenic non-protein coding RNA 1126 HGNC:49275 ENSG00000279873 . 100129726 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RNASEH1-DT RNASEH1 divergent transcript HGNC:49289 ENSG00000234171 . 100506054 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.643813101 knock down down-regulator 0.048096313 REG00012 LINC01127 Long intergenic non-protein coding RNA 1127 HGNC:49292 ENSG00000281162 . 100506328 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SOX9-AS1 SOX9 antisense RNA 1 HGNC:49321 ENSG00000234899 . 400618 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01128 Long intergenic non-protein coding RNA 1128 HGNC:49377 ENSG00000228794 . 643837 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.210030429 knock down up-regulate 0.007906147 REG00012 LINC01128 Long intergenic non-protein coding RNA 1128 HGNC:49377 ENSG00000228794 . 643837 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.944116403 knock down down-regulator 0.023407302 REG00012 SMAD1-AS1 SMAD1 antisense RNA 1 HGNC:49379 ENSG00000250902 . 104326058 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SPACA6-AS1 SPACA6 antisense RNA 1 HGNC:49383 ENSG00000269959 . 102238594 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.138704011 knock down down-regulator 0.011814179 REG00012 SPACA6-AS1 SPACA6 antisense RNA 1 HGNC:49383 ENSG00000269959 . 102238594 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.878876911 knock down down-regulator 0.007418278 REG00012 ERICD E2F1-regulated inhibitor of cell death HGNC:49404 ENSG00000280303 . 104355217 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.202849713 knock down up-regulate 0.00511308 REG00012 GHET1 Gastric carcinoma proliferation enhancing transcript 1 HGNC:49425 ENSG00000281189 . 102723099 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 INKA2-AS1 INKA2 antisense RNA 1 HGNC:49446 ENSG00000227811 . 100506343 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -2.785547507 knock out down-regulator 5.27E-08 REG00012 INKA2-AS1 INKA2 antisense RNA 1 HGNC:49446 ENSG00000227811 . 100506343 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.725424438 knock down down-regulator 3.00E-05 REG00012 INKA2-AS1 INKA2 antisense RNA 1 HGNC:49446 ENSG00000227811 . 100506343 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.379150124 knock down down-regulator 8.61E-07 REG00012 INKA2-AS1 INKA2 antisense RNA 1 HGNC:49446 ENSG00000227811 . 100506343 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.770261379 knock down down-regulator 0.000140043 REG00012 LINC01134 Long intergenic non-protein coding RNA 1134 HGNC:49449 ENSG00000236423 . 100133612 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NFYC-AS1 NFYC antisense RNA 1 HGNC:49451 ENSG00000272145 . 100130557 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.75799881 knock down up-regulate 0.000186855 REG00012 NFYC-AS1 NFYC antisense RNA 1 HGNC:49451 ENSG00000272145 . 100130557 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.912431302 knock down up-regulate 1.88E-06 REG00012 NFYC-AS1 NFYC antisense RNA 1 HGNC:49451 ENSG00000272145 . 100130557 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.728323949 knock down down-regulator 0.000925843 REG00012 ZC3H12A-DT ZC3H12A divergent transcript HGNC:49453 ENSG00000233621 . 728431 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.850106087 knock down down-regulator 5.20E-08 REG00012 ZC3H12A-DT ZC3H12A divergent transcript HGNC:49453 ENSG00000233621 . 728431 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.798919012 knock down up-regulate 4.17E-07 REG00012 LINC01341 Long intergenic non-protein coding RNA 1341 HGNC:49457 ENSG00000227953 . 149134 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01341 Long intergenic non-protein coding RNA 1341 HGNC:49457 ENSG00000227953 . 149134 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.619184682 knock down down-regulator 0.031744517 REG00012 LINC01341 Long intergenic non-protein coding RNA 1341 HGNC:49457 ENSG00000227953 . 149134 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.740945477 knock down up-regulate 0.021935489 REG00012 LINC01341 Long intergenic non-protein coding RNA 1341 HGNC:49457 ENSG00000227953 . 149134 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.963572731 knock down up-regulate 0.014726345 REG00012 LINC01341 Long intergenic non-protein coding RNA 1341 HGNC:49457 ENSG00000227953 . 149134 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -2.401684536 knock down down-regulator 0.002848269 REG00012 POT1-AS1 POT1 antisense RNA 1 HGNC:49459 ENSG00000224897 . 401398 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.693429575 knock down up-regulate 6.45E-05 REG00012 POT1-AS1 POT1 antisense RNA 1 HGNC:49459 ENSG00000224897 . 401398 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.851278936 knock down down-regulator 0.000175189 REG00012 POT1-AS1 POT1 antisense RNA 1 HGNC:49459 ENSG00000224897 . 401398 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.803002831 knock down up-regulate 3.39E-05 REG00012 POT1-AS1 POT1 antisense RNA 1 HGNC:49459 ENSG00000224897 . 401398 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.687905343 knock down up-regulate 3.18E-05 REG00012 ODF2-AS1 ODF2 antisense RNA 1 HGNC:49461 ENSG00000225951 . 107080620 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.871100859 knock down up-regulate 0.006355316 REG00012 ODF2-AS1 ODF2 antisense RNA 1 HGNC:49461 ENSG00000225951 . 107080620 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.642096545 knock down up-regulate 0.000150698 REG00012 LINC01145 Long intergenic non-protein coding RNA 1145 HGNC:49462 ENSG00000272419 . 103091866 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 2.841039435 knock down up-regulate 0.013902414 REG00012 LINC01145 Long intergenic non-protein coding RNA 1145 HGNC:49462 ENSG00000272419 . 103091866 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -2.426989135 knock out down-regulator 0.049533557 REG00012 LINC01145 Long intergenic non-protein coding RNA 1145 HGNC:49462 ENSG00000272419 . 103091866 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.7697644 knock down down-regulator 0.039883814 REG00012 LINC01145 Long intergenic non-protein coding RNA 1145 HGNC:49462 ENSG00000272419 . 103091866 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.946216915 knock down down-regulator 0.031974183 REG00012 LINC01145 Long intergenic non-protein coding RNA 1145 HGNC:49462 ENSG00000272419 . 103091866 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.006350855 knock down down-regulator 0.031224345 REG00012 LINC01145 Long intergenic non-protein coding RNA 1145 HGNC:49462 ENSG00000272419 . 103091866 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.590869407 knock down down-regulator 0.004230695 REG00012 LINC01145 Long intergenic non-protein coding RNA 1145 HGNC:49462 ENSG00000272419 . 103091866 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.088086291 knock down down-regulator 0.001179305 REG00012 C2-AS1 C2 antisense RNA 1 HGNC:49464 ENSG00000281756 . 102060414 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HISLA HIF1A stabilizing long noncoding RNA HGNC:49467 ENSG00000258867 . 283587 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.637838863 knock down down-regulator 0.001821625 REG00012 LOC101928791 long intergenic non-protein coding RNA 1147 HGNC:49468 ENSG00000258826 . 101928791 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01151 Long intergenic non-protein coding RNA 1151 HGNC:49471 ENSG00000253819 . 104266958 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.35779417 knock down down-regulator 0.045318236 REG00012 LINC01151 Long intergenic non-protein coding RNA 1151 HGNC:49471 ENSG00000253819 . 104266958 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.301307088 knock down down-regulator 0.003907851 REG00012 LINC01151 Long intergenic non-protein coding RNA 1151 HGNC:49471 ENSG00000253819 . 104266958 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.862004005 knock down down-regulator 0.03343479 REG00012 LINC01151 Long intergenic non-protein coding RNA 1151 HGNC:49471 ENSG00000253819 . 104266958 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -2.639269751 knock down down-regulator 0.008890118 REG00012 LINC01151 Long intergenic non-protein coding RNA 1151 HGNC:49471 ENSG00000253819 . 104266958 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.656024605 knock down down-regulator 0.01613043 REG00012 LINC01151 Long intergenic non-protein coding RNA 1151 HGNC:49471 ENSG00000253819 . 104266958 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.631950762 knock down down-regulator 0.042344684 REG00012 CASC19 Cancer susceptibility 19 HGNC:49476 ENSG00000254166 . 103021165 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CASC19 Cancer susceptibility 19 HGNC:49476 ENSG00000254166 . 103021165 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.768727181 knock down down-regulator 0.00100524 REG00012 CASC19 Cancer susceptibility 19 HGNC:49476 ENSG00000254166 . 103021165 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.245055067 knock down down-regulator 0.000488372 REG00012 GRK5-IT1 GRK5 intronic transcript 1 HGNC:49478 ENSG00000228485 . 101927868 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.20831221 knock down down-regulator 5.05E-201 REG00012 GRK5-IT1 GRK5 intronic transcript 1 HGNC:49478 ENSG00000228485 . 101927868 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.826474657 knock down down-regulator 1.21E-25 REG00012 FAM53B-AS1 FAM53B antisense RNA 1 HGNC:49499 ENSG00000233334 . 101927944 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EDRF1-AS1 EDRF1 antisense RNA 1 HGNC:49501 ENSG00000236991 . 101927983 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 THRIL TNF and HNRNPL related immunoregulatory long non-coding RNA HGNC:49503 ENSG00000280634 . 102659353 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 THRIL TNF and HNRNPL related immunoregulatory long non-coding RNA HGNC:49503 ENSG00000280634 . 102659353 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.467551401 knock down down-regulator 0.008952246 REG00012 THRIL TNF and HNRNPL related immunoregulatory long non-coding RNA HGNC:49503 ENSG00000280634 . 102659353 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 3.134847221 knock down up-regulate 7.35E-06 REG00012 THRIL TNF and HNRNPL related immunoregulatory long non-coding RNA HGNC:49503 ENSG00000280634 . 102659353 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.550115825 knock down down-regulator 0.001087447 REG00012 HNF4A-AS1 HNF4A antisense RNA 1 HGNC:49505 ENSG00000229005 . 101927219 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 HNF4A-AS1 HNF4A antisense RNA 1 HGNC:49505 ENSG00000229005 . 101927219 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.913034105 knock down down-regulator 0.000651905 REG00012 LINC01158 POU3F3 adjacent non-coding transcript 1 HGNC:49513 ENSG00000233639 . 100506421 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 MAGOH-DT MAGOH divergent transcript HGNC:49539 ENSG00000226754 . 100507564 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.651684358 knock down down-regulator 2.29E-05 REG00012 MAGOH-DT MAGOH divergent transcript HGNC:49539 ENSG00000226754 . 100507564 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.664418569 knock down up-regulate 0.000411506 REG00012 MAGOH-DT MAGOH divergent transcript HGNC:49539 ENSG00000226754 . 100507564 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.598139453 knock down down-regulator 0.000853625 REG00012 MAGOH-DT MAGOH divergent transcript HGNC:49539 ENSG00000226754 . 100507564 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.13478025 knock down up-regulate 0.000269529 REG00012 MAGOH-DT MAGOH divergent transcript HGNC:49539 ENSG00000226754 . 100507564 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.960153422 knock down down-regulator 1.78E-08 REG00012 MAGOH-DT MAGOH divergent transcript HGNC:49539 ENSG00000226754 . 100507564 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.634821429 knock down down-regulator 5.66E-05 REG00012 MAGOH-DT MAGOH divergent transcript HGNC:49539 ENSG00000226754 . 100507564 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.727455561 knock down up-regulate 0.000134279 REG00012 LINC01169 Long intergenic non-protein coding RNA 1169 HGNC:49541 ENSG00000259471 . 102723165 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01173 Long intergenic non-protein coding RNA 1173 HGNC:49545 ENSG00000280744 . 106144537 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.123660525 knock down down-regulator 0.012974156 REG00012 LINC01173 Long intergenic non-protein coding RNA 1173 HGNC:49545 ENSG00000280744 . 106144537 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.114124704 knock down down-regulator 0.012296375 REG00012 LINC01173 Long intergenic non-protein coding RNA 1173 HGNC:49545 ENSG00000280744 . 106144537 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.593737468 knock down down-regulator 0.007788306 REG00012 LINC01173 Long intergenic non-protein coding RNA 1173 HGNC:49545 ENSG00000280744 . 106144537 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.686179213 knock down down-regulator 0.016239654 REG00012 LINC01176 Long intergenic non-protein coding RNA 1176 HGNC:49548 ENSG00000281404 . 100506516 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.935292479 knock down up-regulate 0.006997495 REG00012 MIR222HG MiR222/221 cluster host gene HGNC:49555 ENSG00000270069 . 104457406 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.392075724 knock down down-regulator 0.025905302 REG00012 MIR222HG MiR222/221 cluster host gene HGNC:49555 ENSG00000270069 . 104457406 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.585340657 knock down down-regulator 0.041555026 REG00012 MIR222HG MiR222/221 cluster host gene HGNC:49555 ENSG00000270069 . 104457406 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.823753855 knock down down-regulator 0.004112529 REG00012 MIR222HG MiR222/221 cluster host gene HGNC:49555 ENSG00000270069 . 104457406 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.591052767 knock down down-regulator 0.005498611 REG00012 SLC12A2-DT SLC12A2 divergent transcript HGNC:49565 ENSG00000245937 . 644873 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.628085503 knock down up-regulate 0.005361326 REG00012 SLC12A2-DT SLC12A2 divergent transcript HGNC:49565 ENSG00000245937 . 644873 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.243185563 knock down up-regulate 7.64E-05 REG00012 LINC01186 Long intergenic non-protein coding RNA 1186 HGNC:49573 ENSG00000236751 . 101927574 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.80237297 knock down down-regulator 0.003108152 REG00012 LINC01186 Long intergenic non-protein coding RNA 1186 HGNC:49573 ENSG00000236751 . 101927574 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -3.601257504 knock down down-regulator 0.004167064 REG00012 LINC01186 Long intergenic non-protein coding RNA 1186 HGNC:49573 ENSG00000236751 . 101927574 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.107491111 knock down down-regulator 0.001907115 REG00012 LINC01186 Long intergenic non-protein coding RNA 1186 HGNC:49573 ENSG00000236751 . 101927574 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.109295741 knock down up-regulate 0.00157527 REG00012 LINC01186 Long intergenic non-protein coding RNA 1186 HGNC:49573 ENSG00000236751 . 101927574 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.857854609 knock down down-regulator 0.000936167 REG00012 SNHG19 Small nucleolar RNA host gene 19 HGNC:49574 ENSG00000260260 . 100507303 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.07502255 knock down down-regulator 0.011644992 REG00012 SNHG19 Small nucleolar RNA host gene 19 HGNC:49574 ENSG00000260260 . 100507303 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.833424691 knock down down-regulator 0.015200006 REG00012 SNHG19 Small nucleolar RNA host gene 19 HGNC:49574 ENSG00000260260 . 100507303 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.811094035 knock down down-regulator 0.009026882 REG00012 RARA-AS1 RARA antisense RNA 1 HGNC:49577 ENSG00000265666 . 101929693 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RARA-AS1 RARA antisense RNA 1 HGNC:49577 ENSG00000265666 . 101929693 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.021034917 knock down down-regulator 0.004834515 REG00012 RARA-AS1 RARA antisense RNA 1 HGNC:49577 ENSG00000265666 . 101929693 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.695963289 knock down down-regulator 0.010520695 REG00012 MIR133A1HG MIR133A1 host gene HGNC:49594 ENSG00000265142 . 102723167 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01191 Long intergenic non-protein coding RNA 1191 HGNC:49595 ENSG00000234199 . 440900 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 VLDLR-AS1 VLDLR antisense RNA 1 HGNC:49621 ENSG00000236404 . 401491 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 VLDLR-AS1 VLDLR antisense RNA 1 HGNC:49621 ENSG00000236404 . 401491 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.188472643 knock out down-regulator 0.006581516 REG00012 FIRRE Firre intergenic repeating RNA element HGNC:49627 ENSG00000213468 . 286467 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 FIRRE Firre intergenic repeating RNA element HGNC:49627 ENSG00000213468 . 286467 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.333298323 knock down up-regulate 2.57E-16 REG00012 LINC01201 Long intergenic non-protein coding RNA 1201 HGNC:49632 ENSG00000228659 . 104266960 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.949964167 knock down down-regulator 0.022745816 REG00012 LINC01203 Long intergenic non-protein coding RNA 1203 HGNC:49634 ENSG00000226985 . 100133123 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.921164731 knock down down-regulator 0.019775699 REG00012 LINC01203 Long intergenic non-protein coding RNA 1203 HGNC:49634 ENSG00000226985 . 100133123 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.688185037 knock down down-regulator 0.029531018 REG00012 LINC01204 Long intergenic non-protein coding RNA 1204 HGNC:49635 ENSG00000229563 . 101927528 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.362681228 knock down down-regulator 0.000745074 REG00012 SUCLG2-DT SUCLG2 divergent transcript HGNC:49643 ENSG00000241316 . 101927111 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.067441844 knock down down-regulator 0.026765834 REG00012 SUCLG2-DT SUCLG2 divergent transcript HGNC:49643 ENSG00000241316 . 101927111 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.215265344 knock down down-regulator 0.000537439 REG00012 NCK1-AS1 NCK1 divergent transcript HGNC:49645 ENSG00000239213 . 101927597 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01213 Long intergenic non-protein coding RNA 1213 HGNC:49648 ENSG00000244541 . 101927992 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.641039697 knock down up-regulate 0.013909619 REG00012 LINC01213 Long intergenic non-protein coding RNA 1213 HGNC:49648 ENSG00000244541 . 101927992 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.389338795 knock down down-regulator 0.01301968 REG00012 ABALON Apoptotic BCL2L1-antisense long non-coding RNA HGNC:49667 ENSG00000281376 . 103021294 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ABALON Apoptotic BCL2L1-antisense long non-coding RNA HGNC:49667 ENSG00000281376 . 103021294 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.691297281 knock down up-regulate 0.02828198 REG00012 ABALON Apoptotic BCL2L1-antisense long non-coding RNA HGNC:49667 ENSG00000281376 . 103021294 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.694381123 knock down down-regulator 0.000206742 REG00012 ITGA9-AS1 ITGA9 antisense RNA 1 HGNC:49668 ENSG00000235257 . 101928153 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01224 Long intergenic non-protein coding RNA 1224 HGNC:49676 ENSG00000269416 . 104472717 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.743943035 knock down down-regulator 0.007165072 REG00012 LINC01224 Long intergenic non-protein coding RNA 1224 HGNC:49676 ENSG00000269416 . 104472717 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.592460928 knock down down-regulator 0.003062484 REG00012 LINC01231 Long intergenic non-protein coding RNA 1231 HGNC:49688 ENSG00000236511 . 101929247 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CDC37L1-DT CDC37L1 divergent transcript HGNC:49735 ENSG00000273061 . 101929351 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.053190698 knock out down-regulator 0.049457225 REG00012 PTPRD-AS1 PTPRD antisense RNA 1 HGNC:49753 ENSG00000225706 . 101929407 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01234 Long intergenic non-protein coding RNA 1234 HGNC:49757 ENSG00000249550 . 100506465 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01234 Long intergenic non-protein coding RNA 1234 HGNC:49757 ENSG00000249550 . 100506465 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.657823408 knock down down-regulator 0.049906428 REG00012 LINC01234 Long intergenic non-protein coding RNA 1234 HGNC:49757 ENSG00000249550 . 100506465 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.640883097 knock down down-regulator 0.045873119 REG00012 LURAP1L-AS1 LURAP1L antisense RNA 1 HGNC:49761 ENSG00000235448 . 101929467 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.908961415 knock down down-regulator 0.000213479 REG00012 LURAP1L-AS1 LURAP1L antisense RNA 1 HGNC:49761 ENSG00000235448 . 101929467 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.610215741 knock down up-regulate 0.000507206 REG00012 FOCAD-AS1 FOCAD antisense RNA 1 HGNC:49789 ENSG00000227071 . 101929548 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01239 Long intergenic non-protein coding RNA 1239 HGNC:49796 ENSG00000234840 . 441389 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.87019919 knock down up-regulate 0.043841506 REG00012 LINC01239 Long intergenic non-protein coding RNA 1239 HGNC:49796 ENSG00000234840 . 441389 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -2.07569269 knock out down-regulator 0.029809218 REG00012 LINC01239 Long intergenic non-protein coding RNA 1239 HGNC:49796 ENSG00000234840 . 441389 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.609180566 knock down down-regulator 0.011642738 REG00012 LINC01239 Long intergenic non-protein coding RNA 1239 HGNC:49796 ENSG00000234840 . 441389 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.735545267 knock down down-regulator 0.009210079 REG00012 LINC01239 Long intergenic non-protein coding RNA 1239 HGNC:49796 ENSG00000234840 . 441389 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.880703984 knock down up-regulate 0.032800634 REG00012 RORB-AS1 RORB antisense RNA 1 HGNC:49803 ENSG00000224825 . 103752585 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01250 Long intergenic non-protein coding RNA 1250 HGNC:49844 ENSG00000234423 . 101927554 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ARNTL2-AS1 ARNTL2 antisense RNA 1 HGNC:49892 ENSG00000245311 . 101928646 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 KCNK15-AS1 KCNK15 and WISP2 antisense RNA 1 HGNC:49901 ENSG00000244558 . 106144538 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 B4GALT1-AS1 B4GALT1 antisense RNA 1 HGNC:49910 ENSG00000233554 . 101929639 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 B4GALT1-AS1 B4GALT1 antisense RNA 1 HGNC:49910 ENSG00000233554 . 101929639 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.879325104 knock down down-regulator 0.011202147 REG00012 B4GALT1-AS1 B4GALT1 antisense RNA 1 HGNC:49910 ENSG00000233554 . 101929639 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.967700827 knock down up-regulate 0.022192425 REG00012 UBE2R2-AS1 UBE2R2 antisense RNA 1 HGNC:49911 ENSG00000235481 . 101929688 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.704513147 knock down down-regulator 6.55E-06 REG00012 LMO7-AS1 LMO7 antisense RNA 1 HGNC:50277 ENSG00000261105 . 101927155 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SNHG21 Small nucleolar RNA host gene 21 HGNC:50284 ENSG00000250988 . 100505616 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.901182176 knock down down-regulator 0.005906975 REG00012 SNHG22 Small nucleolar RNA host gene 22 HGNC:50285 ENSG00000267322 . 103091864 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 OSMR-AS1 OSMR divergent transcript HGNC:50296 ENSG00000249740 . 101929768 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TMEM108-AS1 TMEM108 antisense RNA 1 HGNC:50307 ENSG00000251011 . 101927455 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.974121561 knock down down-regulator 0.000270809 REG00012 MROCKI MARCKS cis regulating lncRNA promoter of cytokines and inflammation HGNC:50323 ENSG00000227502 . 285758 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.470472708 knock down up-regulate 1.82E-20 REG00012 MROCKI MARCKS cis regulating lncRNA promoter of cytokines and inflammation HGNC:50323 ENSG00000227502 . 285758 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.211139632 knock down down-regulator 4.33E-07 REG00012 LINC01269 Long intergenic non-protein coding RNA 1269 HGNC:50325 ENSG00000258689 . 103695436 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01271 Long intergenic non-protein coding RNA 1271 HGNC:50327 ENSG00000233077 . 101927586 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01273 Long intergenic non-protein coding RNA 1273 HGNC:50329 ENSG00000231742 . 101927541 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.08999849 knock down up-regulate 0.046215055 REG00012 LINC01273 Long intergenic non-protein coding RNA 1273 HGNC:50329 ENSG00000231742 . 101927541 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.902129176 knock down up-regulate 0.035344432 REG00012 LINC01275 Long intergenic non-protein coding RNA 1275 HGNC:50331 ENSG00000237595 . 101927512 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.787457009 knock down down-regulator 0.001183193 REG00012 LINC01275 Long intergenic non-protein coding RNA 1275 HGNC:50331 ENSG00000237595 . 101927512 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.870850499 knock down up-regulate 0.009396029 REG00012 LINC01275 Long intergenic non-protein coding RNA 1275 HGNC:50331 ENSG00000237595 . 101927512 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.969113479 knock down up-regulate 0.026563274 REG00012 LINC01275 Long intergenic non-protein coding RNA 1275 HGNC:50331 ENSG00000237595 . 101927512 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.604609005 knock down down-regulator 0.006441701 REG00012 FOXP4-AS1 FOXP4 antisense RNA 1 HGNC:50332 ENSG00000234753 . 101060264 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01276 Long intergenic non-protein coding RNA 1276 HGNC:50333 ENSG00000226917 . 103106903 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01277 Long intergenic non-protein coding RNA 1277 HGNC:50334 ENSG00000229017 . 100507489 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.397071827 knock down down-regulator 0.00617281 REG00012 LINC01277 Long intergenic non-protein coding RNA 1277 HGNC:50334 ENSG00000229017 . 100507489 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.626934539 knock down down-regulator 0.04230845 REG00012 LINC01285 Long intergenic non-protein coding RNA 1285 HGNC:50344 ENSG00000203650 . 101928287 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.946843573 knock down up-regulate 0.010100861 REG00012 LINC01285 Long intergenic non-protein coding RNA 1285 HGNC:50344 ENSG00000203650 . 101928287 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.667851474 knock down up-regulate 0.001004247 REG00012 TBX2-AS1 TBX2 antisense RNA 1 HGNC:50355 ENSG00000267280 . 103689912 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TBX2-AS1 TBX2 antisense RNA 1 HGNC:50355 ENSG00000267280 . 103689912 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.627060235 knock down up-regulate 0.012060992 REG00012 LINC01291 Long intergenic non-protein coding RNA 1291 HGNC:50358 ENSG00000204792 . 102724515 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01291 Long intergenic non-protein coding RNA 1291 HGNC:50358 ENSG00000204792 . 102724515 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.800198501 knock down up-regulate 0.039492767 REG00012 LINC01291 Long intergenic non-protein coding RNA 1291 HGNC:50358 ENSG00000204792 . 102724515 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.608431177 knock down up-regulate 0.022563165 REG00012 LINC01293 Long intergenic non-protein coding RNA 1293 HGNC:50362 ENSG00000230836 . 101927861 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.601385032 knock down down-regulator 0.011708516 REG00012 LINC01293 Long intergenic non-protein coding RNA 1293 HGNC:50362 ENSG00000230836 . 101927861 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.157058935 knock down up-regulate 0.000578144 REG00012 IRAIN IGF1R antisense imprinted non-protein coding RNA HGNC:50365 ENSG00000259424 . 104472848 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TMEM92-AS1 TMEM92 antisense RNA 1 HGNC:50442 ENSG00000251179 . 103752589 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.930819352 knock down down-regulator 0.004297466 REG00012 TMEM92-AS1 TMEM92 antisense RNA 1 HGNC:50442 ENSG00000251179 . 103752589 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.10586696 knock down down-regulator 1.35E-05 REG00012 TMEM92-AS1 TMEM92 antisense RNA 1 HGNC:50442 ENSG00000251179 . 103752589 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -3.529458028 knock down down-regulator 1.25E-05 REG00012 TMEM92-AS1 TMEM92 antisense RNA 1 HGNC:50442 ENSG00000251179 . 103752589 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.73794888 knock down down-regulator 0.000111471 REG00012 GNA14-AS1 GNA14 antisense RNA 1 HGNC:50451 ENSG00000231373 . 101927422 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LMF1-AS1 LMF1 antisense RNA 1 HGNC:50469 ENSG00000260439 . 101929387 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC101927780 long intergenic non-protein coding RNA 1303 HGNC:50470 ENSG00000250548 . 101927780 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 FARSA-AS1 FARSA antisense RNA 1 HGNC:50479 ENSG00000266975 . 106144598 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.20772717 knock down up-regulate 0.030630437 REG00012 BIRC6-AS2 BIRC6 antisense RNA 2 HGNC:50490 ENSG00000279897 . 103752586 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NUP50-AS1 NUP50 divergent transcript HGNC:50502 ENSG00000226328 . 100506714 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NUP50-DT NUP50 divergent transcript HGNC:50502 ENSG00000226328 . 100506714 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.083654795 knock down up-regulate 0.001704709 REG00012 EP300-AS1 EP300 antisense RNA 1 HGNC:50504 ENSG00000231993 . 101927279 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EP300-AS1 EP300 antisense RNA 1 HGNC:50504 ENSG00000231993 . 101927279 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.249952312 knock down up-regulate 0.000850272 REG00012 LINC01315 Long intergenic non-protein coding RNA 1315 HGNC:50513 ENSG00000229891 . 102723775 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.632308751 knock down up-regulate 0.039254235 REG00012 GACAT2 Gastric cancer associated transcript 2 HGNC:50516 ENSG00000265962 . 100287082 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.934637487 knock down up-regulate 4.49E-05 REG00012 GACAT2 Gastric cancer associated transcript 2 HGNC:50516 ENSG00000265962 . 100287082 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.827722253 knock down up-regulate 0.00015813 REG00012 GACAT2 Gastric cancer associated transcript 2 HGNC:50516 ENSG00000265962 . 100287082 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.332503893 knock down up-regulate 3.57E-16 REG00012 GACAT2 Gastric cancer associated transcript 2 HGNC:50516 ENSG00000265962 . 100287082 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.849392229 knock down down-regulator 2.10E-07 REG00012 LINC01318 Long intergenic non-protein coding RNA 1318 HGNC:50524 ENSG00000237790 . 106144585 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01322 Long intergenic non-protein coding RNA 1322 HGNC:50528 ENSG00000244128 . 103695433 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.713597972 knock down up-regulate 0.00160668 REG00012 SCAMP1-AS1 SCAMP1 antisense RNA 1 HGNC:50544 ENSG00000245556 . 728769 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01337 Long intergenic non-protein coding RNA 1337 HGNC:50546 ENSG00000251221 . 103689917 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01338 Long intergenic non-protein coding RNA 1338 HGNC:50547 ENSG00000281327 . 102546175 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 LINC01342 Long intergenic non-protein coding RNA 1342 HGNC:50551 ENSG00000223823 . 254099 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LYPLAL1-DT LYPLAL1 divergent transcript HGNC:50560 ENSG00000228063 . 643723 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.848387027 knock down up-regulate 0.000268328 REG00012 LYPLAL1-DT LYPLAL1 divergent transcript HGNC:50560 ENSG00000228063 . 643723 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.874012921 knock out up-regulate 0.000100357 REG00012 LYPLAL1-DT LYPLAL1 divergent transcript HGNC:50560 ENSG00000228063 . 643723 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.961411647 knock down up-regulate 4.32E-05 REG00012 LYPLAL1-DT LYPLAL1 divergent transcript HGNC:50560 ENSG00000228063 . 643723 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.188784555 knock down down-regulator 1.74E-05 REG00012 LYPLAL1-DT LYPLAL1 divergent transcript HGNC:50560 ENSG00000228063 . 643723 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.105404267 knock down up-regulate 2.49E-05 REG00012 LINC01347 Long intergenic non-protein coding RNA 1347 HGNC:50566 ENSG00000214837 . 731275 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01348 Long intergenic non-protein coding RNA 1348 HGNC:50567 ENSG00000280587 . 731656 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01348 Long intergenic non-protein coding RNA 1348 HGNC:50567 ENSG00000280587 . 731656 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.093933724 knock down down-regulator 0.001831196 REG00012 LINC01348 Long intergenic non-protein coding RNA 1348 HGNC:50567 ENSG00000280587 . 731656 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.330440362 knock down down-regulator 0.004196305 REG00012 LINC01348 Long intergenic non-protein coding RNA 1348 HGNC:50567 ENSG00000280587 . 731656 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.793653 knock down up-regulate 0.026527211 REG00012 LINC01349 Long intergenic non-protein coding RNA 1349 HGNC:50568 ENSG00000230402 . 100128787 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.583081515 knock down up-regulate 0.007834199 REG00012 LINC01349 Long intergenic non-protein coding RNA 1349 HGNC:50568 ENSG00000230402 . 100128787 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.655509884 knock down up-regulate 0.002320836 REG00012 RTCA-AS1 RTCA antisense RNA 1 HGNC:50573 ENSG00000224616 . 100506007 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 RTCA-AS1 RTCA antisense RNA 1 HGNC:50573 ENSG00000224616 . 100506007 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 RTCA-AS1 RTCA antisense RNA 1 HGNC:50573 ENSG00000224616 . 100506007 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 2.082764828 knock down up-regulate 0.000111796 REG00012 RTCA-AS1 RTCA antisense RNA 1 HGNC:50573 ENSG00000224616 . 100506007 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.714590398 knock down up-regulate 0.018935699 REG00012 RTCA-AS1 RTCA antisense RNA 1 HGNC:50573 ENSG00000224616 . 100506007 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.760103506 knock down up-regulate 0.001376104 REG00012 HIPK1-AS1 HIPK1 antisense RNA 1 HGNC:50576 ENSG00000235527 . 101928846 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 BRINP3-DT BRINP3 divergent transcript HGNC:50577 ENSG00000237457 . 101929120 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.112384274 knock down up-regulate 0.002480199 REG00012 LINC01352 Long intergenic non-protein coding RNA 1352 HGNC:50578 ENSG00000238078 . 101929730 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ELOA-AS1 ELOA antisense RNA 1 HGNC:50582 ENSG00000236810 . 100506963 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01355 Long intergenic non-protein coding RNA 1355 HGNC:50584 ENSG00000261326 . 100996511 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01356 Long intergenic non-protein coding RNA 1356 HGNC:50587 ENSG00000215866 YA026_HUMAN 100996702 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01356 Long intergenic non-protein coding RNA 1356 HGNC:50587 ENSG00000215866 YA026_HUMAN 100996702 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.198020205 knock down down-regulator 0.044284412 REG00012 LINC01357 Long intergenic non-protein coding RNA 1357 HGNC:50588 ENSG00000224167 . 105378912 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.042010748 knock down up-regulate 0.04643022 REG00012 LINC01357 Long intergenic non-protein coding RNA 1357 HGNC:50588 ENSG00000224167 . 105378912 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.841333676 knock down up-regulate 0.046037567 REG00012 LINC01357 Long intergenic non-protein coding RNA 1357 HGNC:50588 ENSG00000224167 . 105378912 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.716156588 knock down down-regulator 0.003161223 REG00012 LINC01358 Long intergenic non-protein coding RNA 1358 HGNC:50589 ENSG00000237352 . 101926925 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.674946649 knock down up-regulate 0.024306322 REG00012 LINC01358 Long intergenic non-protein coding RNA 1358 HGNC:50589 ENSG00000237352 . 101926925 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.040769452 knock down down-regulator 0.023991094 REG00012 EPHA5-AS1 EPHA5 antisense RNA 1 HGNC:50602 ENSG00000250846 . 100144602 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.863445991 knock out down-regulator 0.001595668 REG00012 TGFB2-AS1 TGFB2 antisense RNA 1 (head to head) HGNC:50628 ENSG00000232480 . 728463 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.451096564 knock down up-regulate 0.000380763 REG00012 TGFB2-AS1 TGFB2 antisense RNA 1 (head to head) HGNC:50628 ENSG00000232480 . 728463 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.729755409 knock down up-regulate 0.043763031 REG00012 HAGLROS HAGLR opposite strand lncRNA HGNC:50646 ENSG00000226363 . 102800310 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01389 Long intergenic non-protein coding RNA 1389 HGNC:50661 ENSG00000225762 . 102724077 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 2.727027116 knock down up-regulate 0.037438662 REG00012 LINC01389 Long intergenic non-protein coding RNA 1389 HGNC:50661 ENSG00000225762 . 102724077 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.449772029 knock down up-regulate 0.022440481 REG00012 LINC01393 Long intergenic non-protein coding RNA 1393 HGNC:50669 ENSG00000225535 . 102724386 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01394 Long intergenic non-protein coding RNA 1394 HGNC:50670 ENSG00000281809 . 106144586 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 BARX1-DT BARX1 divergent transcript HGNC:50673 ENSG00000235601 . 101928040 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -2.105959059 knock down down-regulator 0.006054103 REG00012 BARX1-DT BARX1 divergent transcript HGNC:50673 ENSG00000235601 . 101928040 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -5.502321836 knock down down-regulator 6.54E-32 REG00012 LINC01399 Long intergenic non-protein coding RNA 1399 HGNC:50680 ENSG00000233080 . 104310353 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 LINC01399 Long intergenic non-protein coding RNA 1399 HGNC:50680 ENSG00000233080 . 104310353 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.610882102 knock down down-regulator 0.002891384 REG00012 LINC01399 Long intergenic non-protein coding RNA 1399 HGNC:50680 ENSG00000233080 . 104310353 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.348256374 knock down down-regulator 0.031263908 REG00012 LINC01399 Long intergenic non-protein coding RNA 1399 HGNC:50680 ENSG00000233080 . 104310353 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.590378955 knock down down-regulator 0.039609854 REG00012 LINC01405 Long intergenic non-protein coding RNA 1405 HGNC:50688 ENSG00000185847 . 100131138 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01404 Long intergenic non-protein coding RNA 1404 HGNC:50689 ENSG00000258240 . 105369980 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.861601377 knock down down-regulator 0.0083889 REG00012 ZFPM2-AS1 ZFPM2 antisense RNA 1 HGNC:50698 ENSG00000251003 . 102723356 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.745119555 knock down up-regulate 0.000370405 REG00012 ZFPM2-AS1 ZFPM2 antisense RNA 1 HGNC:50698 ENSG00000251003 . 102723356 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.634670823 knock down down-regulator 0.026485566 REG00012 ZFPM2-AS1 ZFPM2 antisense RNA 1 HGNC:50698 ENSG00000251003 . 102723356 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.748718633 knock down up-regulate 1.76E-06 REG00012 ZFPM2-AS1 ZFPM2 antisense RNA 1 HGNC:50698 ENSG00000251003 . 102723356 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.025892093 knock down up-regulate 0.021851284 REG00012 LINC01411 Long intergenic non-protein coding RNA 1411 HGNC:50703 ENSG00000249306 . 101928176 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01411 Long intergenic non-protein coding RNA 1411 HGNC:50703 ENSG00000249306 . 101928176 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.403357407 knock out up-regulate 0.034521985 REG00012 DPP9-AS1 DPP9 antisense RNA 1 HGNC:50706 ENSG00000205790 . 100131094 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01415 Long intergenic non-protein coding RNA 1415 HGNC:50709 ENSG00000267325 . 100132501 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.924058 knock down down-regulator 0.001718636 REG00012 EPC1-AS1 EPC1 antisense RNA 1 HGNC:50717 ENSG00000229327 . 102031319 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.829596397 knock down down-regulator 0.002508119 REG00012 MIATNB MIAT neighbor HGNC:50731 ENSG00000244625 . 102724827 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01425 Long intergenic non-protein coding RNA 1425 HGNC:50733 ENSG00000233997 . 101927821 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.672570205 knock down down-regulator 0.000459642 REG00012 LINC01426 Long intergenic non-protein coding RNA 1426 HGNC:50734 ENSG00000234380 . 100506385 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ZNF341-AS1 ZNF341 antisense RNA 1 HGNC:50736 ENSG00000230753 . 101929746 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.980032584 knock down down-regulator 0.000657797 REG00012 ZNF341-AS1 ZNF341 antisense RNA 1 HGNC:50736 ENSG00000230753 . 101929746 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.068215441 knock down down-regulator 0.037081231 REG00012 RALY-AS1 RALY antisense RNA 1 HGNC:50743 ENSG00000285230 . 101926888 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01433 Long intergenic non-protein coding RNA 1433 HGNC:50746 ENSG00000230176 . 728228 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PPP3CB-AS1 PPP3CB antisense RNA 1 (head to head) HGNC:50750 ENSG00000221817 . 101929145 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PPP3CB-AS1 PPP3CB antisense RNA 1 (head to head) HGNC:50750 ENSG00000221817 . 101929145 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.9322 knock down up-regulate 2.08E-05 REG00012 PPP3CB-AS1 PPP3CB antisense RNA 1 (head to head) HGNC:50750 ENSG00000221817 . 101929145 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.5887 knock down up-regulate 0.01762 REG00012 LINC01435 Long intergenic non-protein coding RNA 1435 HGNC:50753 ENSG00000229981 . 103695365 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.765783237 knock down down-regulator 0.013029048 REG00012 LINC01435 Long intergenic non-protein coding RNA 1435 HGNC:50753 ENSG00000229981 . 103695365 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.77938981 knock down down-regulator 0.001999619 REG00012 LINC01444 Long intergenic non-protein coding RNA 1444 HGNC:50769 ENSG00000264301 . 101927642 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.121444471 knock down up-regulate 0.000483146 REG00012 NDUFV2-AS1 NDUFV2 antisense RNA 1 HGNC:50826 ENSG00000266053 . 101927275 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NDUFV2-AS1 NDUFV2 antisense RNA 1 HGNC:50826 ENSG00000266053 . 101927275 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.727818737 knock down down-regulator 0.01334724 REG00012 NDUFV2-AS1 NDUFV2 antisense RNA 1 HGNC:50826 ENSG00000266053 . 101927275 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.673442099 knock down down-regulator 0.000194921 REG00012 GACAT3 Gastric cancer associated transcript 3 HGNC:50847 ENSG00000236289 . 104797537 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.774811803 knock down up-regulate 3.07E-38 REG00012 LINC01460 Long intergenic non-protein coding RNA 1460 HGNC:50858 ENSG00000205334 . 100129995 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.002697173 knock out up-regulate 0.01330752 REG00012 PAQR9-AS1 PAQR9 antisense RNA 1 HGNC:50861 ENSG00000241570 . 101927832 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.303408409 knock down down-regulator 6.54E-07 REG00012 BMPR1B-AS1 BMPR1B divergent transcript HGNC:50864 ENSG00000249599 . 100507012 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LNCAROD LncRNA activating regulator of DKK1 HGNC:50913 ENSG00000231131 . 101928687 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 2.389624489 knock down up-regulate 0.000736062 REG00012 LNCAROD LncRNA activating regulator of DKK1 HGNC:50913 ENSG00000231131 . 101928687 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 3.335277193 knock down up-regulate 0.002681239 REG00012 ID2-AS1 ID2 antisense RNA 1 HGNC:51103 ENSG00000235092 . 100506299 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.704256935 knock down up-regulate 0.001269907 REG00012 GATA2-AS1 GATA2 antisense RNA 1 HGNC:51108 ENSG00000244300 . 101927167 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.700761 knock down up-regulate 7.96E-07 REG00012 GATA2-AS1 GATA2 antisense RNA 1 HGNC:51108 ENSG00000244300 . 101927167 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.643744472 knock down down-regulator 0.008874879 REG00012 GATA2-AS1 GATA2 antisense RNA 1 HGNC:51108 ENSG00000244300 . 101927167 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.283525503 knock down up-regulate 1.15E-12 REG00012 GATA2-AS1 GATA2 antisense RNA 1 HGNC:51108 ENSG00000244300 . 101927167 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.530023084 knock down down-regulator 0.046680064 REG00012 LINC01473 Long intergenic non-protein coding RNA 1473 HGNC:51109 ENSG00000237877 . 101927217 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.740295058 knock down down-regulator 0.045360621 REG00012 LINC01473 Long intergenic non-protein coding RNA 1473 HGNC:51109 ENSG00000237877 . 101927217 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.647628435 knock down down-regulator 0.049141495 REG00012 SEMA6A-AS1 SEMA6A antisense RNA 1 HGNC:51110 ENSG00000248445 . 101927233 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01474 Long intergenic non-protein coding RNA 1474 HGNC:51111 ENSG00000236849 . 101927258 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01474 Long intergenic non-protein coding RNA 1474 HGNC:51111 ENSG00000236849 . 101927258 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.69135243 knock down down-regulator 0.005701425 REG00012 LINC01474 Long intergenic non-protein coding RNA 1474 HGNC:51111 ENSG00000236849 . 101927258 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -3.075883595 knock out down-regulator 0.021445424 REG00012 PPP4R1-AS1 PPP4R1 antisense RNA 1 HGNC:51112 ENSG00000263627 . 101927323 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.015 knock down up-regulate 0.0001634 REG00012 DSG1-AS1 DSG1 antisense RNA 1 HGNC:51115 ENSG00000266729 . 101927718 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.60403023 knock down down-regulator 0.002360435 REG00012 DSCAS DSC1/DSC2 antisense RNA HGNC:51116 ENSG00000265888 . 101927698 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01483 Long intergenic non-protein coding RNA 1483 HGNC:51130 ENSG00000227517 . 101928122 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01487 Long intergenic non-protein coding RNA 1487 HGNC:51139 ENSG00000241336 . 101928190 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TESC-AS1 TESC antisense RNA 1 (head to head) HGNC:51142 ENSG00000258285 . 101928244 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PLBD1-AS1 PLBD1 antisense RNA 1 HGNC:51143 ENSG00000256751 . 101928290 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PLBD1-AS1 PLBD1 antisense RNA 1 HGNC:51143 ENSG00000256751 . 101928290 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.813131892 knock down up-regulate 0.013968108 REG00012 LINC01490 Long intergenic non-protein coding RNA 1490 HGNC:51146 ENSG00000257741 . 101928420 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 STPG3-AS1 STPG3 antisense RNA 1 HGNC:51176 ENSG00000275549 . 100129722 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.742420099 knock down down-regulator 0.034724262 REG00012 STPG3-AS1 STPG3 antisense RNA 1 HGNC:51176 ENSG00000275549 . 100129722 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.48282302 knock down up-regulate 0.003950108 REG00012 LCMT1-AS1 LCMT1 antisense RNA 1 HGNC:51177 ENSG00000260448 . 102723510 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.671023061 knock down down-regulator 2.87E-11 REG00012 LCMT1-AS1 LCMT1 antisense RNA 1 HGNC:51177 ENSG00000260448 . 102723510 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.161880639 knock down down-regulator 3.37E-15 REG00012 LCMT1-AS1 LCMT1 antisense RNA 1 HGNC:51177 ENSG00000260448 . 102723510 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.667177159 knock down up-regulate 1.30E-09 REG00012 ZNF30-AS1 ZNF30 antisense RNA 1 HGNC:51179 ENSG00000270876 . 102723513 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.132036289 knock down up-regulate 0.01458413 REG00012 ZNF30-AS1 ZNF30 antisense RNA 1 HGNC:51179 ENSG00000270876 . 102723513 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.100939496 knock down down-regulator 0.021814788 REG00012 LINC01503 Long intergenic non-protein coding RNA 1503 HGNC:51184 ENSG00000233901 . 100506119 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01503 Long intergenic non-protein coding RNA 1503 HGNC:51184 ENSG00000233901 . 100506119 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.178818645 knock down down-regulator 0.041322024 REG00012 C9orf41-AS1 CARNMT1 antisense RNA 1 HGNC:51188 ENSG00000203321 . 101927380 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01507 Long intergenic non-protein coding RNA 1507 HGNC:51189 ENSG00000230945 . 101927477 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TMEM246-AS1 TMEM246 antisense RNA 1 HGNC:51191 ENSG00000225376 . 101928470 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NALT1 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 HGNC:51192 ENSG00000237886 . 101928483 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 2.019589964 knock down up-regulate 0.017121442 REG00012 NALT1 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 HGNC:51192 ENSG00000237886 . 101928483 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.641901826 knock down down-regulator 0.023946395 REG00012 SLIT1-AS1 SLIT1 antisense RNA 1 HGNC:51198 ENSG00000234855 . 100505540 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01513 Long intergenic non-protein coding RNA 1513 HGNC:51202 ENSG00000246016 . 112163642 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.12913508 knock out down-regulator 0.010613018 REG00012 NUTM2B-AS1 NUTM2B antisense RNA 1 HGNC:51204 ENSG00000225484 . 101060691 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.761050505 knock down down-regulator 0.031866372 REG00012 NUTM2B-AS1 NUTM2B antisense RNA 1 HGNC:51204 ENSG00000225484 . 101060691 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.729859164 knock down up-regulate 0.020317987 REG00012 TMEM26-AS1 TMEM26 antisense RNA 1 HGNC:51209 ENSG00000237233 . 101928781 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SVIL-AS1 SVIL antisense RNA 1 HGNC:51219 ENSG00000224597 . 102724316 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SVIL-AS1 SVIL antisense RNA 1 HGNC:51219 ENSG00000224597 . 102724316 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.270769859 knock down up-regulate 0.00013674 REG00012 SVIL-AS1 SVIL antisense RNA 1 HGNC:51219 ENSG00000224597 . 102724316 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.728061741 knock down up-regulate 1.72E-16 REG00012 NEURL1-AS1 NEURL1 antisense RNA 1 HGNC:51220 ENSG00000235470 . 102724341 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TBC1D22A-AS1 TBC1D22A antisense RNA 1 HGNC:51221 ENSG00000280080 . 642757 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 NRSN2-AS1 NRSN2 antisense RNA 1 HGNC:51222 ENSG00000225377 . 100507459 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DLGAP4-AS1 DLGAP4 antisense RNA 1 HGNC:51223 ENSG00000232907 . 101926987 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CEBPB-AS1 CEBPB antisense RNA 1 HGNC:51226 ENSG00000277449 . 101927559 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ADNP-AS1 ADNP antisense RNA 1 HGNC:51227 ENSG00000259456 . 101927631 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 ADNP-AS1 ADNP antisense RNA 1 HGNC:51227 ENSG00000259456 . 101927631 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ADNP-AS1 ADNP antisense RNA 1 HGNC:51227 ENSG00000259456 . 101927631 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 6.614614368 knock down up-regulate 1.62E-05 REG00012 MCM8-AS1 MCM8 antisense RNA 1 HGNC:51230 ENSG00000278719 . 101929225 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 KIZ-AS1 KIZ antisense RNA 1 HGNC:51231 ENSG00000232712 . 101929591 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CSE1L-AS1 CSE1L divergent transcript HGNC:51232 ENSG00000227431 . 102723483 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01526 Long intergenic non-protein coding RNA 1526 HGNC:51265 ENSG00000224995 . 101928770 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MZF1-AS1 MZF1 antisense RNA 1 HGNC:51271 ENSG00000267858 . 100131691 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MZF1-AS1 MZF1 antisense RNA 1 HGNC:51271 ENSG00000267858 . 100131691 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.621315887 knock down up-regulate 0.016043562 REG00012 MZF1-AS1 MZF1 antisense RNA 1 HGNC:51271 ENSG00000267858 . 100131691 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.70077268 knock down down-regulator 0.014547283 REG00012 MZF1-AS1 MZF1 antisense RNA 1 HGNC:51271 ENSG00000267858 . 100131691 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.623997718 knock down down-regulator 0.027889801 REG00012 MZF1-AS1 MZF1 antisense RNA 1 HGNC:51271 ENSG00000267858 . 100131691 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.079166821 knock down up-regulate 0.002585675 REG00012 MZF1-AS1 MZF1 antisense RNA 1 HGNC:51271 ENSG00000267858 . 100131691 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.225886302 knock down down-regulator 0.042095265 REG00012 TMEM147-AS1 TMEM147 antisense RNA 1 HGNC:51273 ENSG00000236144 . 100506469 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ZNF529-AS1 ZNF529 antisense RNA 1 HGNC:51275 ENSG00000233527 . 101927599 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.95458185 knock down down-regulator 0.008282954 REG00012 ZNF567-DT ZNF567 divergent transcript HGNC:51281 ENSG00000225975 . 101927621 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.140136873 knock down down-regulator 0.027808461 REG00012 LINC01535 Long intergenic non-protein coding RNA 1535 HGNC:51282 ENSG00000226686 . 101927667 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.702899896 knock down up-regulate 0.003208289 REG00012 LINC01535 Long intergenic non-protein coding RNA 1535 HGNC:51282 ENSG00000226686 . 101927667 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.752087299 knock down up-regulate 0.035781146 REG00012 PTOV1-AS2 PTOV1 antisense RNA 2 HGNC:51284 ENSG00000269352 . 101928378 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PTOV1-AS2 PTOV1 antisense RNA 2 HGNC:51284 ENSG00000269352 . 101928378 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.016061099 knock down down-regulator 0.012850531 REG00012 ZNF649-AS1 ZNF649 antisense RNA 1 HGNC:51285 ENSG00000268095 . 101928571 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NIPBL-AS1 NIPBL divergent transcript HGNC:51293 ENSG00000285967 . 646719 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ZNF528-AS1 ZNF528 antisense RNA 1 HGNC:51305 ENSG00000269834 . 102724105 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.11324532 knock down down-regulator 0.03927209 REG00012 ZNF528-AS1 ZNF528 antisense RNA 1 HGNC:51305 ENSG00000269834 . 102724105 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.215086164 knock down down-regulator 0.001476394 REG00012 ZNF528-AS1 ZNF528 antisense RNA 1 HGNC:51305 ENSG00000269834 . 102724105 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.913025408 knock down down-regulator 0.000693966 REG00012 ZNF528-AS1 ZNF528 antisense RNA 1 HGNC:51305 ENSG00000269834 . 102724105 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.690317572 knock down down-regulator 0.001585791 REG00012 GAPLINC Gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA HGNC:51308 ENSG00000266835 . 100505592 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.477457323 knock down up-regulate 0.03253393 REG00012 GAPLINC Gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA HGNC:51308 ENSG00000266835 . 100505592 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.43572363 knock out up-regulate 0.009807158 REG00012 GAPLINC Gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA HGNC:51308 ENSG00000266835 . 100505592 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.954121535 knock down up-regulate 0.000122876 REG00012 GAPLINC Gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA HGNC:51308 ENSG00000266835 . 100505592 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.652609911 knock down up-regulate 0.010733261 REG00012 GAPLINC Gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA HGNC:51308 ENSG00000266835 . 100505592 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.221189043 knock down down-regulator 3.26E-09 REG00012 LINC01543 Long intergenic non-protein coding RNA 1543 HGNC:51310 ENSG00000263862 . 100506787 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.942089862 knock down down-regulator 0.001298912 REG00012 LINC01543 Long intergenic non-protein coding RNA 1543 HGNC:51310 ENSG00000263862 . 100506787 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.690697802 knock down down-regulator 0.023455524 REG00012 DSG2-AS1 DSG2 antisense RNA 1 HGNC:51311 ENSG00000264859 . 100652770 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01544 Long intergenic non-protein coding RNA 1544 HGNC:51312 ENSG00000260440 . 100996669 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PIK3CD-AS2 PIK3CD antisense RNA 2 HGNC:51334 ENSG00000231789 . 101929074 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PIK3CD-AS2 PIK3CD antisense RNA 2 HGNC:51334 ENSG00000231789 . 101929074 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.622823006 knock down up-regulate 0.021324526 REG00012 PIK3CD-AS2 PIK3CD antisense RNA 2 HGNC:51334 ENSG00000231789 . 101929074 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.746991601 knock down down-regulator 0.004320759 REG00012 PIK3CD-AS2 PIK3CD antisense RNA 2 HGNC:51334 ENSG00000231789 . 101929074 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.91086151 knock down up-regulate 0.002365002 REG00012 PIK3CD-AS2 PIK3CD antisense RNA 2 HGNC:51334 ENSG00000231789 . 101929074 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.253552013 knock down up-regulate 5.36E-06 REG00012 PIK3CD-AS2 PIK3CD antisense RNA 2 HGNC:51334 ENSG00000231789 . 101929074 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.767594295 knock down up-regulate 0.015016128 REG00012 PIK3CD-AS2 PIK3CD antisense RNA 2 HGNC:51334 ENSG00000231789 . 101929074 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 2.450126942 knock down up-regulate 1.16E-05 REG00012 CCDC144NL-AS1 CCDC144NL antisense RNA 1 HGNC:51340 ENSG00000233098 . 440416 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SP2-AS1 SP2 antisense RNA 1 HGNC:51341 ENSG00000234494 . 100506325 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 RUNDC3A-AS1 RUNDC3A antisense RNA 1 HGNC:51344 ENSG00000267750 . 101926996 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.125910761 knock down down-regulator 0.026588638 REG00012 SEPTIN4-AS1 SEPTIN4 antisense RNA 1 HGNC:51345 ENSG00000264672 . 101927688 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.695424059 knock down up-regulate 0.033893416 REG00012 SEPTIN4-AS1 SEPTIN4 antisense RNA 1 HGNC:51345 ENSG00000264672 . 101927688 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.090216427 knock down down-regulator 0.019871291 REG00012 LOC101927755 RNFT1 divergent transcript HGNC:51346 ENSG00000267302 . 101927755 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PRKCA-AS1 PRKCA antisense RNA 1 HGNC:51347 ENSG00000264630 . 101928001 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 TAT-AS1 TAT antisense RNA 1 HGNC:51369 ENSG00000260886 . 100132529 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ATP2A1-AS1 ATP2A1 antisense RNA 1 HGNC:51370 ENSG00000260442 . 100289092 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.145244406 knock down up-regulate 3.87E-80 REG00012 ATP2A1-AS1 ATP2A1 antisense RNA 1 HGNC:51370 ENSG00000260442 . 100289092 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.138983512 knock down up-regulate 3.46E-268 REG00012 ATP2A1-AS1 ATP2A1 antisense RNA 1 HGNC:51370 ENSG00000260442 . 100289092 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.873887151 knock down down-regulator 0.000740747 REG00012 MMP25-AS1 MMP25 antisense RNA 1 HGNC:51372 ENSG00000261971 . 100507419 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MMP25-AS1 MMP25 antisense RNA 1 HGNC:51372 ENSG00000261971 . 100507419 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.780262645 knock down down-regulator 0.007270407 REG00012 MMP25-AS1 MMP25 antisense RNA 1 HGNC:51372 ENSG00000261971 . 100507419 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.780262645 knock down down-regulator 0.007270407 REG00012 LINC01569 Long intergenic non-protein coding RNA 1569 HGNC:51380 ENSG00000262468 . 100507501 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01569 Long intergenic non-protein coding RNA 1569 HGNC:51380 ENSG00000262468 . 100507501 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.885727931 knock down down-regulator 0.008194929 REG00012 LINC01569 Long intergenic non-protein coding RNA 1569 HGNC:51380 ENSG00000262468 . 100507501 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -3.501619882 knock down down-regulator 0.036010018 REG00012 LINC01569 Long intergenic non-protein coding RNA 1569 HGNC:51380 ENSG00000262468 . 100507501 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.922788441 knock down down-regulator 0.006144084 REG00012 LINC01569 Long intergenic non-protein coding RNA 1569 HGNC:51380 ENSG00000262468 . 100507501 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.704440586 knock down down-regulator 0.019190808 REG00012 ITFG1-AS1 ITFG1 antisense RNA 1 HGNC:51383 ENSG00000260281 . 101927102 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01572 Long intergenic non-protein coding RNA 1572 HGNC:51385 ENSG00000261008 . 101927957 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MIR762HG MIR762 host gene HGNC:51386 ENSG00000260083 . 101928736 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.99922741 knock down up-regulate 0.010259661 REG00012 MIR762HG MIR762 host gene HGNC:51386 ENSG00000260083 . 101928736 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.605034259 knock down up-regulate 0.00849204 REG00012 CARD8-AS1 CARD8 antisense RNA 1 HGNC:51408 ENSG00000268001 . 100505812 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.813369981 knock down down-regulator 0.000678597 REG00012 CARD8-AS1 CARD8 antisense RNA 1 HGNC:51408 ENSG00000268001 . 100505812 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.954504906 knock down up-regulate 0.000629034 REG00012 KCNMB2-AS1 KCNMB2 antisense RNA 1 HGNC:51409 ENSG00000237978 . 104797538 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.25E+00 . . . REG00012 RORA-AS1 RORA antisense RNA 1 HGNC:51410 ENSG00000245534 . 101928784 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EHD4-AS1 EHD4 antisense RNA 1 HGNC:51418 ENSG00000259883 . 101928363 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 EHD4-AS1 EHD4 antisense RNA 1 HGNC:51418 ENSG00000259883 . 101928363 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 THSD4-AS1 THSD4 antisense RNA 1 HGNC:51420 ENSG00000259964 . 101929196 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 INSYN1-AS1 INSYN1 antisense RNA 1 HGNC:51422 ENSG00000260469 . 101929221 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.310588806 knock down down-regulator 0.000453644 REG00012 LINC01583 Long intergenic non-protein coding RNA 1583 HGNC:51425 ENSG00000259518 . 101929690 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.58561722 knock out up-regulate 0.006762549 REG00012 LINC01585 Long intergenic non-protein coding RNA 1585 HGNC:51432 ENSG00000245479 . 101929765 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PCSK6-AS1 PCSK6 antisense RNA 1 HGNC:51448 ENSG00000259764 . 105371027 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01589 Long intergenic non-protein coding RNA 1589 HGNC:51520 ENSG00000238120 . 100506737 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 AATBC Apoptosis associated transcript in bladder cancer HGNC:51526 ENSG00000215458 . 284837 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SNHG25 Small nucleolar RNA host gene 25 HGNC:51534 ENSG00000266402 . 105376843 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 MIR2052HG MIR2052 host gene HGNC:51555 ENSG00000254349 . 441355 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 TONSL-AS1 TONSL antisense RNA 1 HGNC:51556 ENSG00000232600 . 100287098 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -2.061473977 knock down down-regulator 0.000232262 REG00012 TONSL-AS1 TONSL antisense RNA 1 HGNC:51556 ENSG00000232600 . 100287098 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.88175534 knock down down-regulator 0.001972852 REG00012 MAILR Macrophage interferon regulatory lncRNA HGNC:51558 ENSG00000253320 . 100506753 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.517911912 knock down up-regulate 2.28E-05 REG00012 MAILR Macrophage interferon regulatory lncRNA HGNC:51558 ENSG00000253320 . 100506753 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.731003944 knock down up-regulate 0.000638599 REG00012 LINC01595 Long intergenic non-protein coding RNA 1595 HGNC:51586 ENSG00000259108 . 102725176 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.074621588 knock down down-regulator 7.57E-05 REG00012 LINC01595 Long intergenic non-protein coding RNA 1595 HGNC:51586 ENSG00000259108 . 102725176 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.812628875 knock down down-regulator 0.017491113 REG00012 ARF4-AS1 ARF4 antisense RNA 1 HGNC:51593 ENSG00000272146 . 106144532 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.606727646 knock down up-regulate 0.002042933 REG00012 NKILA NF-kappaB interacting lncRNA HGNC:51599 ENSG00000278709 . 105416157 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.664171998 knock down up-regulate 0.000437164 REG00012 NKILA NF-kappaB interacting lncRNA HGNC:51599 ENSG00000278709 . 105416157 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.81212156 knock down up-regulate 0.001043645 REG00012 LOC101927809 cell fate and sterol metabolism associated divergent transcript of MOCOS HGNC:51610 ENSG00000260552 . 101927809 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 COSMOC Cell fate and sterol metabolism associated divergent transcript of MOCOS HGNC:51610 ENSG00000260552 . 101927809 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.909580931 knock down down-regulator 0.012290014 REG00012 COSMOC Cell fate and sterol metabolism associated divergent transcript of MOCOS HGNC:51610 ENSG00000260552 . 101927809 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.936107984 knock down down-regulator 0.045203059 REG00012 TCF4-AS1 TCF4 antisense RNA 1 HGNC:51642 ENSG00000267028 . 105372127 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 MINCR MYC-induced long non-coding RNA HGNC:51653 ENSG00000253716 . 100507316 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01605 Long intergenic non-protein coding RNA 1605 HGNC:51654 ENSG00000253161 . 100507420 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.120469646 knock down down-regulator 0.033875035 REG00012 PKIA-AS1 PKIA antisense RNA 1 HGNC:51659 ENSG00000254266 . 101927003 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PKIA-AS1 PKIA antisense RNA 1 HGNC:51659 ENSG00000254266 . 101927003 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.669238315 knock down up-regulate 0.000819992 REG00012 UBR5-AS1 UBR5 divergent transcript HGNC:51661 ENSG00000246263 . 101927221 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01610 Long intergenic non-protein coding RNA 1610 HGNC:51676 ENSG00000237643 . 101928353 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.331200493 knock down up-regulate 4.21E-05 REG00012 LINC01610 Long intergenic non-protein coding RNA 1610 HGNC:51676 ENSG00000237643 . 101928353 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.70049675 knock down up-regulate 0.006509066 REG00012 LRP1-AS LRP1 antisense RNA HGNC:51694 ENSG00000259125 . 105751187 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MYOSLID Myocardin-induced smooth muscle lncRNA, inducer of differentiation HGNC:51821 ENSG00000229647 . 105373853 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.154215358 knock down down-regulator 0.009336813 REG00012 MYOSLID Myocardin-induced smooth muscle lncRNA, inducer of differentiation HGNC:51821 ENSG00000229647 . 105373853 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.810809722 knock down down-regulator 0.012713388 REG00012 MYOSLID Myocardin-induced smooth muscle lncRNA, inducer of differentiation HGNC:51821 ENSG00000229647 . 105373853 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.893377208 knock down up-regulate 0.01337545 REG00012 MYOSLID Myocardin-induced smooth muscle lncRNA, inducer of differentiation HGNC:51821 ENSG00000229647 . 105373853 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.629833614 knock down down-regulator 0.025121007 REG00012 MYOSLID Myocardin-induced smooth muscle lncRNA, inducer of differentiation HGNC:51821 ENSG00000229647 . 105373853 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.534439321 knock down down-regulator 0.000625562 REG00012 SMILR Smooth muscle induced lncRNA, enhancer of proliferation HGNC:51825 ENSG00000255364 . 105375734 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.923965338 knock down down-regulator 0.002873899 REG00012 SMILR Smooth muscle induced lncRNA, enhancer of proliferation HGNC:51825 ENSG00000255364 . 105375734 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.729388375 knock down down-regulator 0.009898311 REG00012 ATXN2-AS ATXN2 antisense RNA HGNC:51838 ENSG00000258099 . 102723619 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.121546137 knock down down-regulator 6.96E-12 REG00012 LINC01615 Long intergenic non-protein coding RNA 1615 HGNC:51898 ENSG00000223485 . 101929484 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.842172835 knock down down-regulator 0.019245006 REG00012 LINC01615 Long intergenic non-protein coding RNA 1615 HGNC:51898 ENSG00000223485 . 101929484 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.463452162 knock down down-regulator 0.021522735 REG00012 LINC01615 Long intergenic non-protein coding RNA 1615 HGNC:51898 ENSG00000223485 . 101929484 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 3.299894565 knock down up-regulate 0.014358895 REG00012 LINC01615 Long intergenic non-protein coding RNA 1615 HGNC:51898 ENSG00000223485 . 101929484 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.023021358 knock down up-regulate 0.043762105 REG00012 LINC01615 Long intergenic non-protein coding RNA 1615 HGNC:51898 ENSG00000223485 . 101929484 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.023021358 knock down up-regulate 0.043762105 REG00012 PPP1R12A-AS1 PPP1R12A antisense RNA 1 HGNC:51903 ENSG00000257557 . 105369865 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.6647 knock down up-regulate 0.000565 REG00012 MIR34AHG MIR34A host gene HGNC:51913 ENSG00000228526 . 106614088 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MIR3142HG MIR3142 host gene HGNC:51944 ENSG00000253522 . 107075116 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.80241191 knock down up-regulate 0.00380794 REG00012 MIR3142HG MIR3142 host gene HGNC:51944 ENSG00000253522 . 107075116 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.05505302 knock down up-regulate 0.009628126 REG00012 MIR3142HG MIR3142 host gene HGNC:51944 ENSG00000253522 . 107075116 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.388145325 knock down down-regulator 0.008975005 REG00012 MIR3142HG MIR3142 host gene HGNC:51944 ENSG00000253522 . 107075116 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.598497965 knock down down-regulator 0.013822572 REG00012 MIR193BHG MIR193b-365a host gene HGNC:51945 ENSG00000262454 . 100129781 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MIR194-2HG MIR194-2 host gene HGNC:51946 ENSG00000229719 . 105369343 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.843261464 knock down up-regulate 0.007388233 REG00012 MIR194-2HG MIR194-2 host gene HGNC:51946 ENSG00000229719 . 105369343 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.761956589 knock down down-regulator 0.024979303 REG00012 MIR3681HG MIR3681 host gene HGNC:52001 ENSG00000224184 . 100506457 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.617424631 knock down down-regulator 0.036952342 REG00012 MIR3681HG MIR3681 host gene HGNC:52001 ENSG00000224184 . 100506457 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.130256495 knock down down-regulator 0.002985824 REG00012 LINC01623 Long intergenic non-protein coding RNA 1623 HGNC:52050 ENSG00000225595 . 401242 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.672813265 knock down down-regulator 0.00360692 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 4.569373322 knock down up-regulate 0.001940176 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 3.036417898 knock down up-regulate 0.000288666 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 2.973935357 knock down up-regulate 5.99E-06 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.449510034 knock down down-regulator 0.025972529 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.227854761 knock down down-regulator 0.013220974 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.712762602 knock down up-regulate 0.02929628 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 3.229264526 knock down up-regulate 0.005945961 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.077483438 knock down down-regulator 0.01529999 REG00012 CCDC18-AS1 CCDC18 antisense RNA 1 HGNC:52262 ENSG00000223745 . 100131564 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.055056378 knock down down-regulator 0.024595617 REG00012 PCF11-AS1 PCF11 antisense RNA 1 HGNC:52263 ENSG00000269939 . 106736475 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.351900181 knock down down-regulator 0.001611291 REG00012 PCF11-AS1 PCF11 antisense RNA 1 HGNC:52263 ENSG00000269939 . 106736475 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.691031392 knock down down-regulator 1.41E-05 REG00012 CTB-113P19.1 colorectal liver metastasis associated transcript 3 HGNC:52287 ENSG00000249035 . 101927096 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CLMAT3 Colorectal liver metastasis associated transcript 3 HGNC:52287 ENSG00000249035 . 101927096 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.612573991 knock down down-regulator 0.002044969 REG00012 LIPC-AS1 LIPC antisense RNA 1 HGNC:52294 ENSG00000259293 . 101928694 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RP11-442H21.2 DDIT4 antisense RNA 1 HGNC:52379 ENSG00000269926 . 110806271 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 1.00E+00 . . . REG00012 DDIT4-AS1 DDIT4 antisense RNA 1 HGNC:52379 ENSG00000269926 . 110806271 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.178694306 knock down up-regulate 0.022180964 REG00012 DDIT4-AS1 DDIT4 antisense RNA 1 HGNC:52379 ENSG00000269926 . 110806271 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.714020148 knock down up-regulate 0.000455106 REG00012 FBXW7-AS1 FBXW7 antisense RNA 1 HGNC:52397 ENSG00000270751 DEAR_HUMAN 102191832 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 FBXW7-AS1 FBXW7 antisense RNA 1 HGNC:52397 ENSG00000270751 DEAR_HUMAN 102191832 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.03225978 knock down down-regulator 0.007111428 REG00012 LINC01637 Long intergenic non-protein coding RNA 1637 HGNC:52424 ENSG00000237476 . 101928891 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01638 Long intergenic non-protein coding RNA 1638 HGNC:52425 ENSG00000233521 . 105372978 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.958012007 knock down down-regulator 0.035861811 REG00012 LINC01638 Long intergenic non-protein coding RNA 1638 HGNC:52425 ENSG00000233521 . 105372978 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 2.404104239 knock down up-regulate 0.01686456 REG00012 LINC01638 Long intergenic non-protein coding RNA 1638 HGNC:52425 ENSG00000233521 . 105372978 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.586298115 knock out down-regulator 0.023518947 REG00012 LINC01638 Long intergenic non-protein coding RNA 1638 HGNC:52425 ENSG00000233521 . 105372978 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.591258695 knock down down-regulator 0.013541651 REG00012 LINC01638 Long intergenic non-protein coding RNA 1638 HGNC:52425 ENSG00000233521 . 105372978 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.012567069 knock down down-regulator 0.022054374 REG00012 LINC01655 Long intergenic non-protein coding RNA 1655 HGNC:52443 ENSG00000227925 . 101929771 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01659 Long intergenic non-protein coding RNA 1659 HGNC:52447 ENSG00000234928 . 101929374 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.53318916 knock down up-regulate 5.63E-05 REG00012 LINC01659 Long intergenic non-protein coding RNA 1659 HGNC:52447 ENSG00000234928 . 101929374 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.736335848 knock down down-regulator 0.009909012 REG00012 LINC01668 Long intergenic non-protein coding RNA 1668 HGNC:52456 ENSG00000283051 . 101928311 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01668 Long intergenic non-protein coding RNA 1668 HGNC:52456 ENSG00000283051 . 101928311 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.62792973 knock down down-regulator 0.034057494 REG00012 LINC01668 Long intergenic non-protein coding RNA 1668 HGNC:52456 ENSG00000283051 . 101928311 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.707503269 knock down up-regulate 0.030127135 REG00012 LINC01687 Long intergenic non-protein coding RNA 1687 HGNC:52474 ENSG00000233215 . 101927843 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.819640898 knock down down-regulator 0.038433758 REG00012 LINC01693 Long intergenic non-protein coding RNA 1693 HGNC:52478 ENSG00000227764 . 105748977 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.650052878 knock down down-regulator 0.001324839 REG00012 LINC01693 Long intergenic non-protein coding RNA 1693 HGNC:52478 ENSG00000227764 . 105748977 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.780784874 knock out up-regulate 0.010294368 REG00012 LINC01693 Long intergenic non-protein coding RNA 1693 HGNC:52478 ENSG00000227764 . 105748977 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.679708102 knock down up-regulate 0.019626727 REG00012 LINC01693 Long intergenic non-protein coding RNA 1693 HGNC:52478 ENSG00000227764 . 105748977 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.156273172 knock down up-regulate 0.0424035 REG00012 LINC01693 Long intergenic non-protein coding RNA 1693 HGNC:52478 ENSG00000227764 . 105748977 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.958064351 knock down down-regulator 0.040129406 REG00012 LINC01693 Long intergenic non-protein coding RNA 1693 HGNC:52478 ENSG00000227764 . 105748977 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.743956059 knock down down-regulator 0.003315689 REG00012 LINC01704 Long intergenic non-protein coding RNA 1704 HGNC:52492 ENSG00000231666 . 646268 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01704 Long intergenic non-protein coding RNA 1704 HGNC:52492 ENSG00000231666 . 646268 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.862078262 knock down down-regulator 0.031714766 REG00012 LINC01704 Long intergenic non-protein coding RNA 1704 HGNC:52492 ENSG00000231666 . 646268 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.058016336 knock down up-regulate 0.012327417 REG00012 LINC01717 Long intergenic non-protein coding RNA 1717 HGNC:52504 ENSG00000232812 . 105372893 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.495718257 knock down up-regulate 0.016133799 REG00012 LINC01730 Long intergenic non-protein coding RNA 1730 HGNC:52518 ENSG00000275491 . 101929125 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01731 Long intergenic non-protein coding RNA 1731 HGNC:52519 ENSG00000234283 . 105371226 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.628860835 knock down down-regulator 0.046710384 REG00012 LINC01731 Long intergenic non-protein coding RNA 1731 HGNC:52519 ENSG00000234283 . 105371226 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.264020687 knock down up-regulate 0.026427182 REG00012 LINC01743 Long intergenic non-protein coding RNA 1743 HGNC:52531 ENSG00000242042 . 255654 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01752 Long intergenic non-protein coding RNA 1752 HGNC:52540 ENSG00000224961 . 101929395 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.070285768 knock down down-regulator 0.003420976 REG00012 LINC01756 Long intergenic non-protein coding RNA 1756 HGNC:52545 ENSG00000230523 . 101928460 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01759 Long non coding transcriptional activator of miR34a HGNC:52548 ENSG00000234546 . 102724571 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LNCTAM34A Long non coding transcriptional activator of miR34a HGNC:52548 ENSG00000234546 . 102724571 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.259552076 knock down down-regulator 4.51E-06 REG00012 LNCTAM34A Long non coding transcriptional activator of miR34a HGNC:52548 ENSG00000234546 . 102724571 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.337339979 knock down down-regulator 2.15E-05 REG00012 LINC01762 Long intergenic non-protein coding RNA 1762 HGNC:52552 ENSG00000233154 . 101929023 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.953001948 knock down down-regulator 0.010843831 REG00012 LINC01762 Long intergenic non-protein coding RNA 1762 HGNC:52552 ENSG00000233154 . 101929023 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.655823591 knock down down-regulator 0.044362326 REG00012 LINC01762 Long intergenic non-protein coding RNA 1762 HGNC:52552 ENSG00000233154 . 101929023 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.828033924 knock down down-regulator 0.013237414 REG00012 LINC01767 Long intergenic non-protein coding RNA 1767 HGNC:52557 ENSG00000223956 . 105378744 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.058853422 knock down down-regulator 0.02085256 REG00012 LINC01767 Long intergenic non-protein coding RNA 1767 HGNC:52557 ENSG00000223956 . 105378744 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.667790888 knock down down-regulator 0.002473893 REG00012 IGFL2-AS1 IGFL2 antisense RNA 1 HGNC:52559 ENSG00000268621 . 645553 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 2.47043608 knock down up-regulate 0.034747512 REG00012 IGFL2-AS1 IGFL2 antisense RNA 1 HGNC:52559 ENSG00000268621 . 645553 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.073473365 knock down up-regulate 0.001425485 REG00012 LINC01770 Long intergenic non-protein coding RNA 1770 HGNC:52560 ENSG00000225285 . 102724312 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01770 Long intergenic non-protein coding RNA 1770 HGNC:52560 ENSG00000225285 . 102724312 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.722545394 knock down down-regulator 0.001147059 REG00012 LINC01770 Long intergenic non-protein coding RNA 1770 HGNC:52560 ENSG00000225285 . 102724312 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.651745033 knock down down-regulator 0.040753813 REG00012 LINC01772 Long intergenic non-protein coding RNA 1772 HGNC:52562 ENSG00000226029 . 107984921 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.285839084 knock down down-regulator 0.035257389 REG00012 LINC01772 Long intergenic non-protein coding RNA 1772 HGNC:52562 ENSG00000226029 . 107984921 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.800023074 knock down down-regulator 0.010427806 REG00012 LINC01775 Long intergenic non-protein coding RNA 1775 HGNC:52565 ENSG00000267201 . 101928602 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.945007652 knock down down-regulator 0.031107113 REG00012 LINC01775 Long intergenic non-protein coding RNA 1775 HGNC:52565 ENSG00000267201 . 101928602 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.927769394 knock down down-regulator 0.015373068 REG00012 LINC01783 Long intergenic non-protein coding RNA 1783 HGNC:52573 ENSG00000233421 . 100132147 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01786 Long intergenic non-protein coding RNA 1786 HGNC:52575 ENSG00000230415 . 101928895 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.830011964 knock down down-regulator 0.002094896 REG00012 LINC01786 Long intergenic non-protein coding RNA 1786 HGNC:52575 ENSG00000230415 . 101928895 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.222593846 knock down down-regulator 0.006928524 REG00012 LINC01786 Long intergenic non-protein coding RNA 1786 HGNC:52575 ENSG00000230415 . 101928895 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.830987367 knock down down-regulator 0.000702452 REG00012 LINC01786 Long intergenic non-protein coding RNA 1786 HGNC:52575 ENSG00000230415 . 101928895 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.658879784 knock down up-regulate 0.001787401 REG00012 LINC01787 Long intergenic non-protein coding RNA 1787 HGNC:52576 ENSG00000231987 . 101928241 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.241521461 knock down up-regulate 0.013142252 REG00012 LINC01787 Long intergenic non-protein coding RNA 1787 HGNC:52576 ENSG00000231987 . 101928241 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.74370568 knock down up-regulate 0.001271716 REG00012 PKP4-AS1 PKP4 antisense RNA 1 HGNC:52580 ENSG00000204380 . 100129029 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01806 Long intergenic non-protein coding RNA 1806 HGNC:52599 ENSG00000227403 . 100996579 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01807 Long intergenic non-protein coding RNA 1807 HGNC:52610 ENSG00000232023 . 101928765 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.591516133 knock down up-regulate 0.010666972 REG00012 LINC01819 Long intergenic non-protein coding RNA 1819 HGNC:52624 ENSG00000231826 . 102723854 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.739605906 knock down down-regulator 0.030730688 REG00012 LINC01819 Long intergenic non-protein coding RNA 1819 HGNC:52624 ENSG00000231826 . 102723854 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.711282503 knock down down-regulator 0.032864017 REG00012 EPCAM-DT EPCAM divergent transcript HGNC:52639 ENSG00000234690 . 101927043 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.10181687 knock down up-regulate 0.000156418 REG00012 EPCAM-DT EPCAM divergent transcript HGNC:52639 ENSG00000234690 . 101927043 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.235137618 knock down down-regulator 0.015500371 REG00012 EPCAM-DT EPCAM divergent transcript HGNC:52639 ENSG00000234690 . 101927043 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.643029122 knock down down-regulator 0.000216392 REG00012 EPCAM-DT EPCAM divergent transcript HGNC:52639 ENSG00000234690 . 101927043 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.91784885 knock down down-regulator 0.013436838 REG00012 KRT7-AS KRT7 antisense RNA 1 HGNC:52643 ENSG00000257671 . 109729127 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.799904253 knock down up-regulate 5.49E-05 REG00012 TNFRSF10A-DT TNFRSF10A divergent transcript HGNC:52647 ENSG00000250714 . 389641 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -2.081641651 knock down down-regulator 0.002958455 REG00012 TNFRSF10A-DT TNFRSF10A divergent transcript HGNC:52647 ENSG00000250714 . 389641 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.491748959 knock down up-regulate 0.004941928 REG00012 TNFRSF10A-DT TNFRSF10A divergent transcript HGNC:52647 ENSG00000250714 . 389641 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.752229285 knock down down-regulator 0.000669821 REG00012 TNFRSF10A-DT TNFRSF10A divergent transcript HGNC:52647 ENSG00000250714 . 389641 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.049573337 knock down down-regulator 0.016953271 REG00012 GIHCG GIHCG inhibitor of miR-200b/200a/429 expression HGNC:52649 ENSG00000257698 . 100506844 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.128544069 knock down down-regulator 0.0436423 REG00012 GIHCG GIHCG inhibitor of miR-200b/200a/429 expression HGNC:52649 ENSG00000257698 . 100506844 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.602612309 knock down up-regulate 4.43E-60 REG00012 LINC01836 Long intergenic non-protein coding RNA 1836 HGNC:52652 ENSG00000267530 . 107985343 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.753190169 knock down down-regulator 0.008296175 REG00012 LINC01836 Long intergenic non-protein coding RNA 1836 HGNC:52652 ENSG00000267530 . 107985343 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.719269451 knock down down-regulator 0.036500584 REG00012 LINC01843 Long intergenic non-protein coding RNA 1843 HGNC:52659 ENSG00000251169 . 101927934 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.052926376 knock down down-regulator 0.042002098 REG00012 LINC01843 Long intergenic non-protein coding RNA 1843 HGNC:52659 ENSG00000251169 . 101927934 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.399456077 knock down down-regulator 0.000101168 REG00012 LINC01843 Long intergenic non-protein coding RNA 1843 HGNC:52659 ENSG00000251169 . 101927934 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.698515777 knock down up-regulate 0.004401226 REG00012 LINC01843 Long intergenic non-protein coding RNA 1843 HGNC:52659 ENSG00000251169 . 101927934 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.469516977 knock down up-regulate 0.000851991 REG00012 LINC01848 Long intergenic non-protein coding RNA 1848 HGNC:52663 ENSG00000254106 . 100289673 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01848 Long intergenic non-protein coding RNA 1848 HGNC:52663 ENSG00000254106 . 100289673 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 2.151009104 knock down up-regulate 0.000814615 REG00012 LINC01848 Long intergenic non-protein coding RNA 1848 HGNC:52663 ENSG00000254106 . 100289673 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.671712765 knock down up-regulate 0.002020102 REG00012 LINC01864 Long intergenic non-protein coding RNA 1864 HGNC:52683 ENSG00000267522 . 101928886 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01865 Long intergenic non-protein coding RNA 1865 HGNC:52684 ENSG00000233684 . 105373350 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.626957638 knock down down-regulator 0.042304391 REG00012 LINC01865 Long intergenic non-protein coding RNA 1865 HGNC:52684 ENSG00000233684 . 105373350 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.965020538 knock down up-regulate 0.011762687 REG00012 LINC01881 Long intergenic non-protein coding RNA 1881 HGNC:52700 ENSG00000220804 . 728323 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01881 Long intergenic non-protein coding RNA 1881 HGNC:52700 ENSG00000220804 . 728323 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.707520738 knock down down-regulator 0.038601141 REG00012 LINC01881 Long intergenic non-protein coding RNA 1881 HGNC:52700 ENSG00000220804 . 728323 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.683202448 knock down up-regulate 0.047070757 REG00012 LINC01882 Long intergenic non-protein coding RNA 1882 HGNC:52701 ENSG00000260302 . 100996324 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.736949576 knock down up-regulate 0.038846633 REG00012 LINC01909 Long intergenic non-protein coding RNA 1909 HGNC:52728 ENSG00000266258 . 101927481 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01910 Long intergenic non-protein coding RNA 1910 HGNC:52729 ENSG00000266278 . 101060542 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.14856423 knock down up-regulate 0.041738179 REG00012 LINC01910 Long intergenic non-protein coding RNA 1910 HGNC:52729 ENSG00000266278 . 101060542 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.417857605 knock down up-regulate 0.026606723 REG00012 LINC01910 Long intergenic non-protein coding RNA 1910 HGNC:52729 ENSG00000266278 . 101060542 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.835040392 knock down up-regulate 0.003491242 REG00012 LINC01910 Long intergenic non-protein coding RNA 1910 HGNC:52729 ENSG00000266278 . 101060542 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.860819917 knock down down-regulator 0.028280757 REG00012 LINC01912 Long intergenic non-protein coding RNA 1912 HGNC:52731 ENSG00000264699 . 105372175 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.959326224 knock down down-regulator 0.024009879 REG00012 LINC01912 Long intergenic non-protein coding RNA 1912 HGNC:52731 ENSG00000264699 . 105372175 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.774474087 knock down up-regulate 0.010289816 REG00012 LINC01914 Long intergenic non-protein coding RNA 1914 HGNC:52733 ENSG00000234362 . 101929723 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.426430746 knock down down-regulator 0.001048126 REG00012 LINC01914 Long intergenic non-protein coding RNA 1914 HGNC:52733 ENSG00000234362 . 101929723 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.715290093 knock down down-regulator 0.006330401 REG00012 LINC01914 Long intergenic non-protein coding RNA 1914 HGNC:52733 ENSG00000234362 . 101929723 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.597822046 knock down down-regulator 0.007747732 REG00012 LNCSRLR LncRNA sorafenib resistance in renal cell carcinoma associated HGNC:52753 ENSG00000240032 . 109729161 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.701498244 knock down down-regulator 0.017508967 REG00012 LNCSRLR LncRNA sorafenib resistance in renal cell carcinoma associated HGNC:52753 ENSG00000240032 . 109729161 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.701498244 knock down down-regulator 0.017508967 REG00012 LNCSRLR LncRNA sorafenib resistance in renal cell carcinoma associated HGNC:52753 ENSG00000240032 . 109729161 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 3.595989567 knock down up-regulate 0.007990782 REG00012 LNCSRLR LncRNA sorafenib resistance in renal cell carcinoma associated HGNC:52753 ENSG00000240032 . 109729161 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 3.595989567 knock down up-regulate 0.007990782 REG00012 LNCSRLR LncRNA sorafenib resistance in renal cell carcinoma associated HGNC:52753 ENSG00000240032 . 109729161 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.625917726 knock down up-regulate 0.002296134 REG00012 LINC01934 Long intergenic non-protein coding RNA 1934 HGNC:52757 ENSG00000234663 . 101927156 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01942 Long intergenic non-protein coding RNA 1942 HGNC:52766 ENSG00000253428 . 105377736 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.158657005 knock out up-regulate 0.009568727 REG00012 LINC01943 Long intergenic non-protein coding RNA 1943 HGNC:52767 ENSG00000280721 . 101928173 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 2.157501802 knock out up-regulate 0.021406616 REG00012 LINC01948 Long intergenic non-protein coding RNA 1948 HGNC:52772 ENSG00000248727 . 102467147 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.814597883 knock down down-regulator 0.03396205 REG00012 LINC01958 Long intergenic non-protein coding RNA 1958 HGNC:52784 ENSG00000283436 . 105373708 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.52958943 knock down down-regulator 0.001861021 REG00012 LINC01958 Long intergenic non-protein coding RNA 1958 HGNC:52784 ENSG00000283436 . 105373708 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.64618667 knock down up-regulate 0.000288295 REG00012 LINC01960 Long intergenic non-protein coding RNA 1960 HGNC:52785 ENSG00000260868 . 100128905 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 AFTPH-DT AFTPH divergent transcript HGNC:52788 ENSG00000260101 . 101927402 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.784441406 knock down up-regulate 6.56E-08 REG00012 AFTPH-DT AFTPH divergent transcript HGNC:52788 ENSG00000260101 . 101927402 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 6.785641312 knock down up-regulate 0.000993934 REG00012 LINC01967 Long intergenic non-protein coding RNA 1967 HGNC:52793 ENSG00000235493 . 107986041 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.361377223 knock down down-regulator 0.007104214 REG00012 LINC01976 Long intergenic non-protein coding RNA 1976 HGNC:52803 ENSG00000261514 . 107546764 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.430207135 knock out down-regulator 0.018013653 REG00012 LINC01977 Long intergenic non-protein coding RNA 1977 HGNC:52804 ENSG00000262772 . 105371919 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.71905248 knock down up-regulate 0.029403489 REG00012 LINC01977 Long intergenic non-protein coding RNA 1977 HGNC:52804 ENSG00000262772 . 105371919 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.766083051 knock down up-regulate 0.004307079 REG00012 LINC01977 Long intergenic non-protein coding RNA 1977 HGNC:52804 ENSG00000262772 . 105371919 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.59529113 knock down down-regulator 1.41E-05 REG00012 LINC01979 Long intergenic non-protein coding RNA 1979 HGNC:52807 ENSG00000262585 . 101928766 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC01979 Long intergenic non-protein coding RNA 1979 HGNC:52807 ENSG00000262585 . 101928766 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.632114922 knock down up-regulate 0.013370223 REG00012 LINC01979 Long intergenic non-protein coding RNA 1979 HGNC:52807 ENSG00000262585 . 101928766 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.786643234 knock down down-regulator 0.007311326 REG00012 LOC105371907 SEPTIN9 divergent transcript HGNC:52818 ENSG00000263718 . 105371907 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC01988 Long intergenic non-protein coding RNA 1988 HGNC:52820 ENSG00000283036 . 100506319 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC01998 Long intergenic non-protein coding RNA 1998 HGNC:52832 ENSG00000243321 . 107986046 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.68258526 knock down down-regulator 0.014539342 REG00012 LINC01998 Long intergenic non-protein coding RNA 1998 HGNC:52832 ENSG00000243321 . 107986046 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.794636818 knock down down-regulator 0.031860231 REG00012 LINC01998 Long intergenic non-protein coding RNA 1998 HGNC:52832 ENSG00000243321 . 107986046 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.375600324 knock down up-regulate 0.004612214 REG00012 SNHG30 Small nucleolar RNA host gene 30 HGNC:52836 ENSG00000267321 . 105371743 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.961666972 knock down down-regulator 8.75E-05 REG00012 LINC02014 Long intergenic non-protein coding RNA 2014 HGNC:52849 ENSG00000248243 . 105374105 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.938297272 knock down up-regulate 0.012003728 REG00012 LINC02014 Long intergenic non-protein coding RNA 2014 HGNC:52849 ENSG00000248243 . 105374105 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.979619126 knock down down-regulator 0.001400815 REG00012 LINC02015 Long intergenic non-protein coding RNA 2015 HGNC:52850 ENSG00000231574 . 102724550 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -2.692274952 knock down down-regulator 0.009033399 REG00012 LINC02015 Long intergenic non-protein coding RNA 2015 HGNC:52850 ENSG00000231574 . 102724550 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.671355546 knock down down-regulator 0.001268817 REG00012 LINC02019 Long intergenic non-protein coding RNA 2019 HGNC:52854 ENSG00000273356 . 107986085 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.920839081 knock down down-regulator 0.026495835 REG00012 LINC02019 Long intergenic non-protein coding RNA 2019 HGNC:52854 ENSG00000273356 . 107986085 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.738639508 knock down down-regulator 0.037310074 REG00012 LINC02021 Long intergenic non-protein coding RNA 2021 HGNC:52856 ENSG00000249846 . 105374104 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.105174502 knock down up-regulate 0.03034158 REG00012 LINC02021 Long intergenic non-protein coding RNA 2021 HGNC:52856 ENSG00000249846 . 105374104 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.973401701 knock down down-regulator 0.013896867 REG00012 LINC02022 Long intergenic non-protein coding RNA 2022 HGNC:52857 ENSG00000232746 . 105376955 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINCR-0002 PYDC2 antisense RNA 1 HGNC:52874 ENSG00000223812 . 103344926 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02035 Long intergenic non-protein coding RNA 2035 HGNC:52875 ENSG00000273033 . 100129550 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02035 Long intergenic non-protein coding RNA 2035 HGNC:52875 ENSG00000273033 . 100129550 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.688010145 knock down down-regulator 0.046973644 REG00012 LINC02041 Long intergenic non-protein coding RNA 2041 HGNC:52881 ENSG00000228952 . 105374261 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 3.097610589 knock down up-regulate 0.037984168 REG00012 LINC02041 Long intergenic non-protein coding RNA 2041 HGNC:52881 ENSG00000228952 . 105374261 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.483019706 knock down up-regulate 0.026239638 REG00012 LINC02043 Long intergenic non-protein coding RNA 2043 HGNC:52883 ENSG00000232233 . 102724699 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.652237918 knock down down-regulator 0.038234234 REG00012 LINC02050 Long intergenic non-protein coding RNA 2050 HGNC:52890 ENSG00000242781 . 105377175 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.881851649 knock down down-regulator 0.013748977 REG00012 NDST1-AS1 NDST1 antisense RNA 1 HGNC:52899 ENSG00000254333 . 102546298 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02057 Long intergenic non-protein coding RNA 2057 HGNC:52900 ENSG00000249279 . 105378992 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.146135499 knock out down-regulator 0.038108208 REG00012 SH3TC2-DT SH3TC2 divergent transcript HGNC:52905 ENSG00000250072 . 255187 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.818990409 knock down down-regulator 0.036104703 REG00012 LINC02080 Long intergenic non-protein coding RNA 2080 HGNC:52928 ENSG00000267065 . 101928514 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SCAT1 S-phase cancer associated transcript 1 HGNC:52930 ENSG00000267123 . 101928710 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.597649803 knock out down-regulator 0.000116512 REG00012 SCAT1 S-phase cancer associated transcript 1 HGNC:52930 ENSG00000267123 . 101928710 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.645286357 knock down down-regulator 0.00196508 REG00012 SCAT1 S-phase cancer associated transcript 1 HGNC:52930 ENSG00000267123 . 101928710 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.707864168 knock down down-regulator 0.01261427 REG00012 LINC02086 Long intergenic non-protein coding RNA 2086 HGNC:52936 ENSG00000244649 . 105371809 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.149953966 knock down down-regulator 0.046205642 REG00012 LINC02086 Long intergenic non-protein coding RNA 2086 HGNC:52936 ENSG00000244649 . 105371809 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.597644836 knock down down-regulator 0.033774352 REG00012 LINC02086 Long intergenic non-protein coding RNA 2086 HGNC:52936 ENSG00000244649 . 105371809 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.962047914 knock down down-regulator 0.049698923 REG00012 LINC02086 Long intergenic non-protein coding RNA 2086 HGNC:52936 ENSG00000244649 . 105371809 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.923051763 knock down down-regulator 0.03929286 REG00012 LOC105371506 DHX33 divergent transcript HGNC:52937 ENSG00000262099 . 105371506 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02091 Long intergenic non-protein coding RNA 2091 HGNC:52942 ENSG00000273172 . 100506371 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 POC1B-AS1 POC1B antisense RNA 1 HGNC:52949 ENSG00000270344 . 109729146 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.305159237 knock down up-regulate 0.001088548 REG00012 POC1B-AS1 POC1B antisense RNA 1 HGNC:52949 ENSG00000270344 . 109729146 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.604256899 knock down up-regulate 0.002941739 REG00012 TERLR1 TERT regulating lncRNA 1 HGNC:52952 ENSG00000249201 . 101928857 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.61579185 knock down up-regulate 0.016490298 REG00012 TERLR1 TERT regulating lncRNA 1 HGNC:52952 ENSG00000249201 . 101928857 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.804094787 knock down down-regulator 0.019538396 REG00012 LINC02106 Long intergenic non-protein coding RNA 2106 HGNC:52961 ENSG00000251573 . 100287592 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02111 Long intergenic non-protein coding RNA 2111 HGNC:52966 ENSG00000250822 . 401177 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 C5orf64-AS1 C5orf64 antisense RNA 1 HGNC:52969 ENSG00000251575 . 100506526 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02119 Long intergenic non-protein coding RNA 2119 HGNC:52975 ENSG00000248461 . 101929745 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.797213863 knock down up-regulate 0.02344737 REG00012 LINC02119 Long intergenic non-protein coding RNA 2119 HGNC:52975 ENSG00000248461 . 101929745 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.651192456 knock down down-regulator 0.043943491 REG00012 LIX1-AS1 LIX1 and RIOK2 antisense RNA 1 HGNC:52976 ENSG00000251513 . 101926893 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.843071694 knock down down-regulator 0.048645597 REG00012 LIX1-AS1 LIX1 and RIOK2 antisense RNA 1 HGNC:52976 ENSG00000251513 . 101926893 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.843071694 knock down down-regulator 0.048645597 REG00012 LINC02126 Long intergenic non-protein coding RNA 2126 HGNC:52983 ENSG00000259847 . 101927650 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02130 Long intergenic non-protein coding RNA 2130 HGNC:52989 ENSG00000260009 . 105447648 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02133 Long intergenic non-protein coding RNA 2133 HGNC:52993 ENSG00000261231 . 101927132 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02137 Long intergenic non-protein coding RNA 2137 HGNC:52997 ENSG00000260186 . 105371295 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.741201112 knock down down-regulator 0.023979352 REG00012 LINC02137 Long intergenic non-protein coding RNA 2137 HGNC:52997 ENSG00000260186 . 105371295 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.675368563 knock down down-regulator 0.043350822 REG00012 LINC02139 Long intergenic non-protein coding RNA 2139 HGNC:52999 ENSG00000278214 . 400548 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02139 Long intergenic non-protein coding RNA 2139 HGNC:52999 ENSG00000278214 . 400548 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.022866337 knock down down-regulator 0.013685242 REG00012 LINC02139 Long intergenic non-protein coding RNA 2139 HGNC:52999 ENSG00000278214 . 400548 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.019226232 knock down up-regulate 0.01628316 REG00012 LINC02151 Long intergenic non-protein coding RNA 2151 HGNC:53013 ENSG00000236437 . 109729162 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.893359248 knock down up-regulate 0.000596468 REG00012 LINC02154 Long intergenic non-protein coding RNA 2154 HGNC:53015 ENSG00000235385 . 109729169 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -2.430715557 knock down down-regulator 0.001618271 REG00012 LINC02154 Long intergenic non-protein coding RNA 2154 HGNC:53015 ENSG00000235385 . 109729169 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.675473987 knock out up-regulate 0.032533286 REG00012 LINC02154 Long intergenic non-protein coding RNA 2154 HGNC:53015 ENSG00000235385 . 109729169 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.803584159 knock down down-regulator 0.010004053 REG00012 NIHCOLE NcRNA involved in NHEJ oncogenic ligation efficiency HGNC:53024 ENSG00000251026 . 107986389 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.671965525 knock down up-regulate 9.06E-07 REG00012 NIHCOLE NcRNA involved in NHEJ oncogenic ligation efficiency HGNC:53024 ENSG00000251026 . 107986389 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.766809041 knock down down-regulator 0.00025537 REG00012 LINC02166 Long intergenic non-protein coding RNA 2166 HGNC:53027 ENSG00000260259 . 105371416 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.051550517 knock down up-regulate 0.033834855 REG00012 LINC02166 Long intergenic non-protein coding RNA 2166 HGNC:53027 ENSG00000260259 . 105371416 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.051550517 knock down up-regulate 0.033834855 REG00012 LINC02166 Long intergenic non-protein coding RNA 2166 HGNC:53027 ENSG00000260259 . 105371416 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.051550517 knock down up-regulate 0.033834855 REG00012 ARLNC1 Androgen receptor regulated long noncoding RNA 1 HGNC:53032 ENSG00000260896 . 100996425 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 2.741277421 knock down up-regulate 1.03E-06 REG00012 LOC101928880 long intergenic non-protein coding RNA 2182 HGNC:53044 ENSG00000260420 . 101928880 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02193 Long intergenic non-protein coding RNA 2193 HGNC:53055 ENSG00000260923 . 105371423 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.641058185 knock down down-regulator 0.043251035 REG00012 LINC02193 Long intergenic non-protein coding RNA 2193 HGNC:53055 ENSG00000260923 . 105371423 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.44535798 knock down down-regulator 0.044827977 REG00012 MIR583HG MIR583 host gene HGNC:53061 ENSG00000250551 . 107984114 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.242278641 knock down down-regulator 0.037383207 REG00012 MIR583HG MIR583 host gene HGNC:53061 ENSG00000250551 . 107984114 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.29822907 knock down up-regulate 0.011032561 REG00012 MIR583HG MIR583 host gene HGNC:53061 ENSG00000250551 . 107984114 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.008607005 knock down down-regulator 0.002393941 REG00012 MIR583HG MIR583 host gene HGNC:53061 ENSG00000250551 . 107984114 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.749028629 knock down down-regulator 0.03659012 REG00012 MIR583HG MIR583 host gene HGNC:53061 ENSG00000250551 . 107984114 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.888995051 knock down up-regulate 0.048969777 REG00012 LINC02202 Long intergenic non-protein coding RNA 2202 HGNC:53068 ENSG00000245812 . 101927740 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.8652188 knock down up-regulate 0.01469724 REG00012 LINC02204 Long intergenic non-protein coding RNA 2204 HGNC:53070 ENSG00000280639 . 101929151 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.2898585 knock down down-regulator 0.035318307 REG00012 LINC02204 Long intergenic non-protein coding RNA 2204 HGNC:53070 ENSG00000280639 . 101929151 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.639448796 knock down down-regulator 0.001317225 REG00012 LINC02205 Long intergenic non-protein coding RNA 2205 HGNC:53071 ENSG00000259473 . 105370880 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.346175981 knock down down-regulator 0.000108906 REG00012 LMNB1-DT LMNB1 divergent transcript HGNC:53089 ENSG00000251072 . 102723557 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.43571437 knock down up-regulate 0.035425203 REG00012 RP11-549K20.1 long intergenic non-protein coding RNA 2228 HGNC:53097 ENSG00000251273 . 105374694 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 LINC02232 Long intergenic non-protein coding RNA 2232 HGNC:53103 ENSG00000250125 . 401134 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.722716022 knock down down-regulator 0.014375403 REG00012 LINC02236 Long intergenic non-protein coding RNA 2236 HGNC:53107 ENSG00000251365 . 109729133 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.638485706 knock down down-regulator 0.01527616 REG00012 LINC02236 Long intergenic non-protein coding RNA 2236 HGNC:53107 ENSG00000251365 . 109729133 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.690756997 knock down up-regulate 0.039609764 REG00012 LOC100505771 melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 HGNC:53110 ENSG00000232442 . 100505771 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MHENCR Melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 HGNC:53110 ENSG00000232442 . 100505771 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -6.425393451 knock down down-regulator 0.022987677 REG00012 MHENCR Melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 HGNC:53110 ENSG00000232442 . 100505771 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.659450824 knock down down-regulator 0.00412943 REG00012 MHENCR Melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 HGNC:53110 ENSG00000232442 . 100505771 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.174595419 knock down down-regulator 0.020430133 REG00012 SPON1-AS1 SPON1 antisense RNA 1 HGNC:53117 ENSG00000254418 . 109729138 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.882972844 knock down down-regulator 0.002102844 REG00012 SPON1-AS1 SPON1 antisense RNA 1 HGNC:53117 ENSG00000254418 . 109729138 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.828482027 knock down down-regulator 0.013149345 REG00012 SPON1-AS1 SPON1 antisense RNA 1 HGNC:53117 ENSG00000254418 . 109729138 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.597847187 knock down down-regulator 0.03433903 REG00012 FHIP1A-DT FHIP1A divergent transcript HGNC:53123 ENSG00000251611 . 105377486 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.438958164 knock down up-regulate 0.005736321 REG00012 FHIP1A-DT FHIP1A divergent transcript HGNC:53123 ENSG00000251611 . 105377486 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.759279848 knock down up-regulate 0.041875844 REG00012 DM1-AS DM1 locus antisense RNA HGNC:53125 ENSG00000267395 . 109729182 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.603128303 knock down down-regulator 0.001752017 REG00012 DM1-AS DM1 locus antisense RNA HGNC:53125 ENSG00000267395 . 109729182 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.340822305 knock down up-regulate 0.003645125 REG00012 DM1-AS DM1 locus antisense RNA HGNC:53125 ENSG00000267395 . 109729182 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.399812093 knock down down-regulator 2.36E-28 REG00012 DM1-AS DM1 locus antisense RNA HGNC:53125 ENSG00000267395 . 109729182 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.608095637 knock down up-regulate 0.002356673 REG00012 ITFG2-AS1 ITFG2 antisense RNA 1 HGNC:53128 ENSG00000258325 . 283440 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.809288808 knock down up-regulate 0.002034078 REG00012 ITFG2-AS1 ITFG2 antisense RNA 1 HGNC:53128 ENSG00000258325 . 283440 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.67817565 knock down up-regulate 0.000903855 REG00012 LINC02243 Long intergenic non-protein coding RNA 2243 HGNC:53129 ENSG00000236091 . 340581 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.710319967 knock out down-regulator 0.036358392 REG00012 LIVAR Liver cell viability associated lncRNA HGNC:53130 ENSG00000266304 . 102724895 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.681600972 knock down down-regulator 2.26E-05 REG00012 LIVAR Liver cell viability associated lncRNA HGNC:53130 ENSG00000266304 . 102724895 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.681600972 knock down down-regulator 2.26E-05 REG00012 SNHG26 Small nucleolar RNA host gene 26 HGNC:53131 ENSG00000228649 . 109729180 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.846508746 knock out down-regulator 0.000847063 REG00012 SNHG26 Small nucleolar RNA host gene 26 HGNC:53131 ENSG00000228649 . 109729180 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.60370692 knock down down-regulator 0.015286555 REG00012 SNHG26 Small nucleolar RNA host gene 26 HGNC:53131 ENSG00000228649 . 109729180 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.965215943 knock down down-regulator 0.003954362 REG00012 ZNF710-AS1 ZNF710 antisense RNA 1 HGNC:53141 ENSG00000259291 . 109729181 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.362908823 knock down down-regulator 0.002332695 REG00012 ZNF710-AS1 ZNF710 antisense RNA 1 HGNC:53141 ENSG00000259291 . 109729181 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.887791412 knock down down-regulator 0.018206611 REG00012 SLC12A5-AS1 SLC12A5 and MMP9 antisense RNA 1 HGNC:53143 ENSG00000204044 . 109729184 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.751325236 knock down down-regulator 0.001434012 REG00012 SLC12A5-AS1 SLC12A5 and MMP9 antisense RNA 1 HGNC:53143 ENSG00000204044 . 109729184 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.645234121 knock down down-regulator 1.97E-05 REG00012 TGFB3-AS1 TGFB3 antisense RNA 1 HGNC:53144 ENSG00000258876 . 109729179 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.031461767 knock down up-regulate 0.008393779 REG00012 LINC02253 Long intergenic non-protein coding RNA 2253 HGNC:53151 ENSG00000259485 . 107984764 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.260220598 knock down down-regulator 0.02635747 REG00012 LINC02253 Long intergenic non-protein coding RNA 2253 HGNC:53151 ENSG00000259485 . 107984764 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.645354769 knock down down-regulator 0.015741016 REG00012 LOC101928580 P4HA3 antisense RNA 1 HGNC:53160 ENSG00000246211 . 101928580 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLC5A4-AS1 SLC5A4 antisense RNA 1 HGNC:53163 ENSG00000242082 . 110806273 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.610386692 knock down up-regulate 0.000963647 REG00012 LINC02600 Long intergenic non-protein coding RNA 2600 HGNC:53177 ENSG00000250986 . 107986251 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.063429905 knock down down-regulator 0.019037011 REG00012 LINC02600 Long intergenic non-protein coding RNA 2600 HGNC:53177 ENSG00000250986 . 107986251 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.346055685 knock down up-regulate 0.021310456 REG00012 LINC02600 Long intergenic non-protein coding RNA 2600 HGNC:53177 ENSG00000250986 . 107986251 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.907778658 knock down up-regulate 0.027200309 REG00012 LINC02266 Long intergenic non-protein coding RNA 2266 HGNC:53180 ENSG00000272727 . 105377466 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.144356432 knock down down-regulator 0.035858559 REG00012 LINC02268 Long intergenic non-protein coding RNA 2268 HGNC:53183 ENSG00000248174 . 101928509 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.313121574 knock down down-regulator 0.001811951 REG00012 LINC02269 Long intergenic non-protein coding RNA 2269 HGNC:53184 ENSG00000250708 . 101928478 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.591726223 knock out up-regulate 0.017810115 REG00012 MAP3K9-DT MAP3K9 divergent transcript HGNC:53189 ENSG00000259153 . 100506411 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.681487074 knock down up-regulate 0.000129048 REG00012 LINC02282 Long intergenic non-protein coding RNA 2282 HGNC:53199 ENSG00000257056 . 105370424 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.68274749 knock down down-regulator 0.03228092 REG00012 LINC02282 Long intergenic non-protein coding RNA 2282 HGNC:53199 ENSG00000257056 . 105370424 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.702374248 knock down down-regulator 0.027798733 REG00012 LINC02293 Long intergenic non-protein coding RNA 2293 HGNC:53209 ENSG00000257185 . 102724890 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.6336201 knock down down-regulator 0.005613507 REG00012 LINC02293 Long intergenic non-protein coding RNA 2293 HGNC:53209 ENSG00000257185 . 102724890 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.364981294 knock down up-regulate 0.004832507 REG00012 LOC100506603 VASH1 antisense RNA 1 HGNC:53215 ENSG00000258301 . 100506603 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 VASH1-AS1 VASH1 antisense RNA 1 HGNC:53215 ENSG00000258301 . 100506603 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.495527224 knock down up-regulate 0.000951172 REG00012 VASH1-AS1 VASH1 antisense RNA 1 HGNC:53215 ENSG00000258301 . 100506603 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -3.391611614 knock down down-regulator 3.36E-06 REG00012 LOC100506700 long intergenic non-protein coding RNA 2308 HGNC:53227 ENSG00000258675 . 100506700 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02310 Long intergenic non-protein coding RNA 2310 HGNC:53229 ENSG00000258808 . 105370496 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.518435137 knock down down-regulator 0.033570248 REG00012 LINC02310 Long intergenic non-protein coding RNA 2310 HGNC:53229 ENSG00000258808 . 105370496 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.480788761 knock down up-regulate 0.000886928 REG00012 LINC02313 Long intergenic non-protein coding RNA 2313 HGNC:53232 ENSG00000258474 . 105370439 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.233235445 knock out up-regulate 0.034963692 REG00012 LINC02313 Long intergenic non-protein coding RNA 2313 HGNC:53232 ENSG00000258474 . 105370439 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.780228294 knock down up-regulate 0.029706516 REG00012 LINC02313 Long intergenic non-protein coding RNA 2313 HGNC:53232 ENSG00000258474 . 105370439 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.061204322 knock down down-regulator 0.009342643 REG00012 LINC02321 Long intergenic non-protein coding RNA 2321 HGNC:53240 ENSG00000258884 . 105370623 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.840639393 knock down down-regulator 0.019220765 REG00012 LINC02321 Long intergenic non-protein coding RNA 2321 HGNC:53240 ENSG00000258884 . 105370623 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.787158999 knock down up-regulate 0.02187538 REG00012 LINC02323 Long intergenic non-protein coding RNA 2323 HGNC:53242 ENSG00000259230 . 105370681 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.651753031 knock down down-regulator 0.015492128 REG00012 LINC02323 Long intergenic non-protein coding RNA 2323 HGNC:53242 ENSG00000259230 . 105370681 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.61095047 knock down up-regulate 0.020516199 REG00012 LINC02328 Long intergenic non-protein coding RNA 2328 HGNC:53248 ENSG00000258733 . 101928767 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.631634173 knock down up-regulate 0.01938324 REG00012 LINC02328 Long intergenic non-protein coding RNA 2328 HGNC:53248 ENSG00000258733 . 101928767 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.631634173 knock down up-regulate 0.01938324 REG00012 LINC02328 Long intergenic non-protein coding RNA 2328 HGNC:53248 ENSG00000258733 . 101928767 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.631634173 knock down up-regulate 0.01938324 REG00012 LINC02340 Long intergenic non-protein coding RNA 2340 HGNC:53260 ENSG00000275294 . 105370125 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.631634173 knock out up-regulate 0.01938324 REG00012 LINC02356 Long intergenic non-protein coding RNA 2356 HGNC:53278 ENSG00000257595 . 105369984 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.64787147 knock down up-regulate 0.008575454 REG00012 LINC02361 Long intergenic non-protein coding RNA 2361 HGNC:53283 ENSG00000256576 . 100996246 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.642308527 knock out up-regulate 0.048168579 REG00012 LOC102723766 long intergenic non-protein coding RNA 2362 HGNC:53284 ENSG00000249096 . 102723766 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LVCAT8 Long intergenic non-protein coding RNA 2365 HGNC:53285 ENSG00000254233 . 105377586 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02365 Long intergenic non-protein coding RNA 2365 HGNC:53285 ENSG00000254233 . 105377586 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.642308527 knock down up-regulate 0.048168579 REG00012 LINC02365 Long intergenic non-protein coding RNA 2365 HGNC:53285 ENSG00000254233 . 105377586 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.642308527 knock down up-regulate 0.048168579 REG00012 LINC02365 Long intergenic non-protein coding RNA 2365 HGNC:53285 ENSG00000254233 . 105377586 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.905008903 knock down down-regulator 0.030165813 REG00012 KDM2B-DT KDM2B divergent transcript HGNC:53287 ENSG00000256742 . 101928346 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.625857555 knock down up-regulate 2.80E-05 REG00012 LINC02376 Long intergenic non-protein coding RNA 2376 HGNC:53298 ENSG00000256292 . 105370065 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.905008903 knock down down-regulator 0.030165813 REG00012 FIGNL2-DT FIGNL2 divergent transcript HGNC:53299 ENSG00000259887 . 105369971 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.3999104 knock down up-regulate 3.95E-29 REG00012 ADGRD1-AS1 ADGRD1 antisense RNA 1 HGNC:53314 ENSG00000256151 . 105755954 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.903970415 knock out down-regulator 0.001979028 REG00012 ADCY6-DT ADCY6 divergent transcript HGNC:53332 ENSG00000257660 . 100506125 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.641122558 knock down down-regulator 0.000432579 REG00012 ADCY6-DT ADCY6 divergent transcript HGNC:53332 ENSG00000257660 . 100506125 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.641122558 knock down down-regulator 0.000432579 REG00012 LOC102724933 long intergenic non-protein coding RNA 2412 HGNC:53341 ENSG00000258171 . 102724933 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02413 Long intergenic non-protein coding RNA 2413 HGNC:53342 ENSG00000257345 . 105369906 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.684780122 knock down down-regulator 0.048691075 REG00012 LINC02413 Long intergenic non-protein coding RNA 2413 HGNC:53342 ENSG00000257345 . 105369906 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.672824935 knock down down-regulator 0.004585037 REG00012 LINC02427 Long intergenic non-protein coding RNA 2427 HGNC:53358 ENSG00000271538 . 105377585 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.850429824 knock down down-regulator 0.003770489 REG00012 LINC02427 Long intergenic non-protein coding RNA 2427 HGNC:53358 ENSG00000271538 . 105377585 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.683166894 knock down down-regulator 0.000680755 REG00012 LINC02454 Long intergenic non-protein coding RNA 2454 HGNC:53387 ENSG00000256268 . 105369807 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.818036666 knock down down-regulator 0.045935142 REG00012 LINC02454 Long intergenic non-protein coding RNA 2454 HGNC:53387 ENSG00000256268 . 105369807 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.833518828 knock down up-regulate 0.016787971 REG00012 LOC100507091 PITPNM2 antisense RNA 1 HGNC:53391 ENSG00000251497 . 100507091 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02453 Long intergenic non-protein coding RNA 2453 HGNC:53392 ENSG00000245017 . 643770 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.454466398 knock down down-regulator 0.00086297 REG00012 LINC02453 Long intergenic non-protein coding RNA 2453 HGNC:53392 ENSG00000245017 . 643770 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.599011406 knock down up-regulate 0.002654409 REG00012 LOC102724663 PPFIA2 antisense RNA 1 HGNC:53397 ENSG00000257467 . 102724663 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02615 Long intergenic non-protein coding RNA 2615 HGNC:53402 ENSG00000251432 . 100507487 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.854410788 knock down up-regulate 3.73E-20 REG00012 LINC02615 Long intergenic non-protein coding RNA 2615 HGNC:53402 ENSG00000251432 . 100507487 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.824146114 knock down up-regulate 1.94E-69 REG00012 LINC02615 Long intergenic non-protein coding RNA 2615 HGNC:53402 ENSG00000251432 . 100507487 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.976511025 knock down up-regulate 0.001281112 REG00012 LINC02615 Long intergenic non-protein coding RNA 2615 HGNC:53402 ENSG00000251432 . 100507487 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.892535929 knock down up-regulate 1.49E-05 REG00012 FAM239C Family with sequence similarity 239 member C HGNC:53416 ENSG00000205662 . 107987330 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.717340242 knock down up-regulate 0.027181195 REG00012 LINC02475 Long intergenic non-protein coding RNA 2475 HGNC:53418 ENSG00000251350 . 100506827 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.61374696 knock down down-regulator 0.001368433 REG00012 LINC02475 Long intergenic non-protein coding RNA 2475 HGNC:53418 ENSG00000251350 . 100506827 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.61374696 knock down down-regulator 0.001368433 REG00012 LINC02475 Long intergenic non-protein coding RNA 2475 HGNC:53418 ENSG00000251350 . 100506827 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.734358587 knock down down-regulator 0.04758075 REG00012 LINC02475 Long intergenic non-protein coding RNA 2475 HGNC:53418 ENSG00000251350 . 100506827 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.780176557 knock down down-regulator 0.010072235 REG00012 LINC02475 Long intergenic non-protein coding RNA 2475 HGNC:53418 ENSG00000251350 . 100506827 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.660381954 knock down down-regulator 0.003902923 REG00012 LINC02475 Long intergenic non-protein coding RNA 2475 HGNC:53418 ENSG00000251350 . 100506827 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.023092517 knock down up-regulate 0.041675679 REG00012 SMIM14-DT SMIM14 divergent transcript HGNC:53455 ENSG00000255458 . 105374419 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.809421239 knock down down-regulator 0.012014066 REG00012 SMIM14-DT SMIM14 divergent transcript HGNC:53455 ENSG00000255458 . 105374419 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.217250458 knock down down-regulator 0.003439707 REG00012 LINC02482 Long intergenic non-protein coding RNA 2482 HGNC:53458 ENSG00000251580 . 105374366 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.680580646 knock down down-regulator 0.010619102 REG00012 LINC02482 Long intergenic non-protein coding RNA 2482 HGNC:53458 ENSG00000251580 . 105374366 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.926704738 knock down down-regulator 0.001029618 REG00012 LINC02482 Long intergenic non-protein coding RNA 2482 HGNC:53458 ENSG00000251580 . 105374366 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.89482262 knock down down-regulator 0.010606942 REG00012 LINC02482 Long intergenic non-protein coding RNA 2482 HGNC:53458 ENSG00000251580 . 105374366 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.957555664 knock down down-regulator 0.005418415 REG00012 LINC02482 Long intergenic non-protein coding RNA 2482 HGNC:53458 ENSG00000251580 . 105374366 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.808881224 knock down down-regulator 0.048904554 REG00012 LINC02482 Long intergenic non-protein coding RNA 2482 HGNC:53458 ENSG00000251580 . 105374366 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.495873253 knock down down-regulator 0.021624666 REG00012 GASAL1 Growth arrest associated lncRNA 1 HGNC:53461 ENSG00000253669 . 401472 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.677029229 knock out up-regulate 9.38E-11 REG00012 LOC727993 PDYN antisense RNA 1 HGNC:53462 ENSG00000233896 . 727993 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DDN-AS1 DDN and PRKAG1 antisense RNA 1 HGNC:53464 ENSG00000257913 . 105369758 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.714020148 knock down up-regulate 0.000455106 REG00012 DDN-AS1 DDN and PRKAG1 antisense RNA 1 HGNC:53464 ENSG00000257913 . 105369758 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.587848257 knock down up-regulate 0.006329785 REG00012 DDN-AS1 DDN and PRKAG1 antisense RNA 1 HGNC:53464 ENSG00000257913 . 105369758 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.587848257 knock down up-regulate 0.006329785 REG00012 LOC101926941 SPRY4 antisense RNA 1 HGNC:53465 ENSG00000231185 . 101926941 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SPRY4-AS1 SPRY4 antisense RNA 1 HGNC:53465 ENSG00000231185 . 101926941 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.403248812 knock down down-regulator 0.048634914 REG00012 SPRY4-AS1 SPRY4 antisense RNA 1 HGNC:53465 ENSG00000231185 . 101926941 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.508392274 knock down down-regulator 0.028028086 REG00012 SPRY4-AS1 SPRY4 antisense RNA 1 HGNC:53465 ENSG00000231185 . 101926941 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.846330793 knock down down-regulator 0.013166873 REG00012 SPRY4-AS1 SPRY4 antisense RNA 1 HGNC:53465 ENSG00000231185 . 101926941 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.3077065 knock down down-regulator 0.002134908 REG00012 SPRY4-AS1 SPRY4 antisense RNA 1 HGNC:53465 ENSG00000231185 . 101926941 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.520458188 knock down down-regulator 0.00010762 REG00012 SPRY4-AS1 SPRY4 antisense RNA 1 HGNC:53465 ENSG00000231185 . 101926941 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.135064223 knock down down-regulator 0.000785496 REG00012 LOC102723778 long intergenic non-protein coding RNA 2497 HGNC:53482 ENSG00000251182 . 102723778 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02499 Long intergenic non-protein coding RNA 2499 HGNC:53484 ENSG00000250436 . 728040 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.494649709 knock down down-regulator 0.021587394 REG00012 LINC02499 Long intergenic non-protein coding RNA 2499 HGNC:53484 ENSG00000250436 . 728040 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.494649709 knock down down-regulator 0.021587394 REG00012 LINC02499 Long intergenic non-protein coding RNA 2499 HGNC:53484 ENSG00000250436 . 728040 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.0739811 knock down down-regulator 0.000120169 REG00012 LINC02513 Long intergenic non-protein coding RNA 2513 HGNC:53502 ENSG00000248227 . 105374410 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.762692141 knock down down-regulator 0.033069497 REG00012 LINC02516 Long intergenic non-protein coding RNA 2516 HGNC:53505 ENSG00000261083 . 101927087 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.762692141 knock down down-regulator 0.033069497 REG00012 LINC02525 Long intergenic non-protein coding RNA 2525 HGNC:53545 ENSG00000230269 . 100507194 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.576740358 knock down up-regulate 0.036621304 REG00012 LINC02525 Long intergenic non-protein coding RNA 2525 HGNC:53545 ENSG00000230269 . 100507194 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.576740358 knock down up-regulate 0.036621304 REG00012 LINC02532 Long intergenic non-protein coding RNA 2532 HGNC:53549 ENSG00000235142 . 100422737 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.649607901 knock down down-regulator 0.002311471 REG00012 LINC02535 Long intergenic non-protein coding RNA 2535 HGNC:53569 ENSG00000234155 . 101928820 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.283570145 knock down up-regulate 0.033383022 REG00012 LINC02535 Long intergenic non-protein coding RNA 2535 HGNC:53569 ENSG00000234155 . 101928820 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.237204963 knock down up-regulate 0.003911228 REG00012 LINC02535 Long intergenic non-protein coding RNA 2535 HGNC:53569 ENSG00000234155 . 101928820 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.237204963 knock down up-regulate 0.003911228 REG00012 LINC02535 Long intergenic non-protein coding RNA 2535 HGNC:53569 ENSG00000234155 . 101928820 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.237204963 knock down up-regulate 0.003911228 REG00012 LINC02542 Long intergenic non-protein coding RNA 2542 HGNC:53576 ENSG00000226453 . 102724168 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.620822837 knock down up-regulate 0.002530542 REG00012 LINC02542 Long intergenic non-protein coding RNA 2542 HGNC:53576 ENSG00000226453 . 102724168 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.066139526 knock down down-regulator 0.02847551 REG00012 LOC100506314 GPRC5D and HEBP1 antisense RNA 1 HGNC:53599 ENSG00000247498 . 100506314 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02562 Long intergenic non-protein coding RNA 2562 HGNC:53602 ENSG00000260265 . 105377283 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.13041023 knock down up-regulate 0.003970778 REG00012 BMF-AS1 BMF antisense RNA 1 HGNC:53612 ENSG00000259409 . 110806288 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.010461472 knock down down-regulator 1.33E-22 REG00012 BMF-AS1 BMF antisense RNA 1 HGNC:53612 ENSG00000259409 . 110806288 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.936515024 knock down up-regulate 0.033519963 REG00012 SLC25A34-AS1 SLC25A34 and TMEM82 antisense RNA 1 HGNC:53623 ENSG00000224459 . 110806303 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.82899277 knock down down-regulator 0.000611196 REG00012 MAL2-AS1 MAL2 antisense RNA 1 HGNC:53626 ENSG00000253972 . 105375726 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.875210112 knock down up-regulate 0.000477934 REG00012 MAL2-AS1 MAL2 antisense RNA 1 HGNC:53626 ENSG00000253972 . 105375726 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.725097092 knock down up-regulate 0.004633973 REG00012 ITGB1-DT ITGB1 divergent transcript HGNC:53718 ENSG00000229656 . 101929475 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.994143939 knock down up-regulate 3.93E-05 REG00012 ITGB1-DT ITGB1 divergent transcript HGNC:53718 ENSG00000229656 . 101929475 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.8588742 knock down up-regulate 0.003620616 REG00012 ITGB1-DT ITGB1 divergent transcript HGNC:53718 ENSG00000229656 . 101929475 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.883390428 knock down down-regulator 3.14E-07 REG00012 ITGB1-DT ITGB1 divergent transcript HGNC:53718 ENSG00000229656 . 101929475 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.398194939 knock down up-regulate 0.000259312 REG00012 DPH5-DT DPH5 divergent transcript HGNC:53720 ENSG00000233184 . 102606465 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.533802819 knock down down-regulator 0.001139764 REG00012 DPH5-DT DPH5 divergent transcript HGNC:53720 ENSG00000233184 . 102606465 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.166084033 knock down down-regulator 0.006152463 REG00012 BNC2-AS1 BNC2 antisense RNA 1 HGNC:53727 ENSG00000234779 . 111216284 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.254620323 knock down up-regulate 3.74E-18 REG00012 BNC2-AS1 BNC2 antisense RNA 1 HGNC:53727 ENSG00000234779 . 111216284 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.690622685 knock down up-regulate 4.30E-05 REG00012 LOC100133669 LY6E divergent transcript HGNC:53728 ENSG00000247317 . 100133669 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC00969 MIR570 host gene HGNC:53743 . . 440993 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RPS6KB2-AS1 RPS6KB2 antisense RNA 1 HGNC:53744 ENSG00000255949 . 111216279 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.433837301 knock out up-regulate 0.01765224 REG00012 RPS6KB2-AS1 RPS6KB2 antisense RNA 1 HGNC:53744 ENSG00000255949 . 111216279 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.940569232 knock down up-regulate 0.002258968 REG00012 LINC02575 Long intergenic non-protein coding RNA 2575 HGNC:53747 ENSG00000228709 . 111216286 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.593799487 knock down down-regulator 0.013603592 REG00012 LINC02575 Long intergenic non-protein coding RNA 2575 HGNC:53747 ENSG00000228709 . 111216286 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.593799487 knock down down-regulator 0.013603592 REG00012 LINC02580 Long intergenic non-protein coding RNA 2580 HGNC:53751 ENSG00000230587 . 100506047 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.093606383 knock down up-regulate 0.040822297 REG00012 LINC02580 Long intergenic non-protein coding RNA 2580 HGNC:53751 ENSG00000230587 . 100506047 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.093606383 knock down up-regulate 0.040822297 REG00012 FAM111A-DT FAM111A divergent transcript HGNC:53752 ENSG00000245571 . 101927204 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.597879426 knock down down-regulator 0.015603819 REG00012 FAM111A-DT FAM111A divergent transcript HGNC:53752 ENSG00000245571 . 101927204 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -4.67833153 knock down down-regulator 0.017450804 REG00012 FAM111A-DT FAM111A divergent transcript HGNC:53752 ENSG00000245571 . 101927204 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.864609436 knock down up-regulate 0.005154025 REG00012 FAM111A-DT FAM111A divergent transcript HGNC:53752 ENSG00000245571 . 101927204 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.715202783 knock down down-regulator 0.0303264 REG00012 LOC100130476 wound and keratinocyte migration associated lncRNA 2 HGNC:53754 ENSG00000237499 . 100130476 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 WAKMAR2 Wound and keratinocyte migration associated lncRNA 2 HGNC:53754 ENSG00000237499 . 100130476 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.623440391 knock down down-regulator 0.000231635 REG00012 WAKMAR2 Wound and keratinocyte migration associated lncRNA 2 HGNC:53754 ENSG00000237499 . 100130476 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.196240792 knock down down-regulator 9.57E-13 REG00012 KCCAT333 Long intergenic non-protein coding RNA 2888 HGNC:53765 ENSG00000236318 . 102659288 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ZNF460-AS1 ZNF460 antisense RNA 1 HGNC:53774 ENSG00000267871 . 105372476 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -3.299561956 knock down down-regulator 1.41E-06 REG00012 LOC101928238 ZNF426 divergent transcript HGNC:53777 ENSG00000278611 . 101928238 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 THORLNC Testis associated oncogenic lncRNA HGNC:53788 ENSG00000226856 . 100506797 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.046261228 knock out down-regulator 0.000590858 REG00012 LINC02582 Long intergenic non-protein coding RNA 2582 HGNC:53792 ENSG00000261780 . 100505817 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.669344419 knock out up-regulate 0.015690802 REG00012 LINC02582 Long intergenic non-protein coding RNA 2582 HGNC:53792 ENSG00000261780 . 100505817 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 2.124740876 knock down up-regulate 0.004651438 REG00012 LINC02582 Long intergenic non-protein coding RNA 2582 HGNC:53792 ENSG00000261780 . 100505817 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 2.124740876 knock down up-regulate 0.004651438 REG00012 LINC02582 Long intergenic non-protein coding RNA 2582 HGNC:53792 ENSG00000261780 . 100505817 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.722752548 knock down down-regulator 0.047114475 REG00012 LOC101805491 long intergenic non-protein coding RNA 2583 HGNC:53812 ENSG00000187600 . 101805491 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SYNGAP1-AS1 SYNGAP1 antisense RNA 1 HGNC:53831 ENSG00000274259 . 112390310 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.474378961 knock out down-regulator 0.036132804 REG00012 TMSB15B-AS1 TMSB15B antisense RNA 1 HGNC:53858 ENSG00000231728 . 100128594 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.434210215 knock down down-regulator 2.97E-05 REG00012 LINC02591 Long intergenic non-protein coding RNA 2591 HGNC:53901 ENSG00000263590 . 388692 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.080282253 knock down down-regulator 0.003018374 REG00012 LINC02591 Long intergenic non-protein coding RNA 2591 HGNC:53901 ENSG00000263590 . 388692 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.64753152 knock down down-regulator 0.026224664 REG00012 SIRLNT SIRT1 regulating lncRNA tumor promoter HGNC:53902 ENSG00000253802 . 112543493 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.613822226 knock out up-regulate 0.000156865 REG00012 ZKSCAN2-DT ZKSCAN2 divergent transcript HGNC:53912 ENSG00000274925 . 112577464 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.859465505 knock down down-regulator 0.037724713 REG00012 ZKSCAN2-DT ZKSCAN2 divergent transcript HGNC:53912 ENSG00000274925 . 112577464 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.257659572 knock down down-regulator 0.001429252 REG00012 LOC100130417 long intergenic non-protein coding RNA 2593 HGNC:53933 ENSG00000223764 . 100130417 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02593 Long intergenic non-protein coding RNA 2593 HGNC:53933 ENSG00000223764 . 100130417 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.356036254 knock down down-regulator 0.000684196 REG00012 LINC02593 Long intergenic non-protein coding RNA 2593 HGNC:53933 ENSG00000223764 . 100130417 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 2.12131379 knock down up-regulate 0.007220638 REG00012 CPNE8-AS1 CPNE8 antisense RNA 1 HGNC:53937 ENSG00000257718 . 107984504 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.825958728 knock down down-regulator 0.003612755 REG00012 LOC401585 long intergenic non-protein coding RNA 2595 HGNC:53946 ENSG00000231566 . 401585 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LNCOC1 LncRNA associated with ovarian cancer 1 HGNC:53947 ENSG00000253741 . 100288181 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -3.307925541 knock down down-regulator 0.007188427 REG00012 LNCOC1 LncRNA associated with ovarian cancer 1 HGNC:53947 ENSG00000253741 . 100288181 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 4.485864999 knock down up-regulate 0.003694579 REG00012 LGALSL-DT LGALSL divergent transcript HGNC:53951 ENSG00000223935 . 105374771 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 3.702494243 knock down up-regulate 0.009420579 REG00012 LOC100506113 UVRAG divergent transcript HGNC:53952 ENSG00000255507 . 100506113 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC401554 GPR107 adjacent cis regulating lncRNA HGNC:53957 ENSG00000196979 . 401554 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ZKSCAN7-AS1 ZKSCAN7 ZNF cluster antisense RNA 1 HGNC:53964 ENSG00000236869 . 112840933 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.685274012 knock down down-regulator 0.003825058 REG00012 ACTR3-AS1 ACTR3 antisense RNA 1 HGNC:53965 ENSG00000228857 . 101060091 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.838600768 knock out up-regulate 0.013402976 REG00012 LOC105373185 long intergenic non-protein coding RNA 2601 HGNC:53966 ENSG00000223714 . 105373185 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RMEL3 Enriched in melanoma 3 HGNC:53975 ENSG00000250961 . 123466201 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.801325089 knock down up-regulate 0.004104044 REG00012 RMEL3 Enriched in melanoma 3 HGNC:53975 ENSG00000250961 . 123466201 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.002881883 knock down down-regulator 0.00042368 REG00012 LOC101927895 EMC1 antisense RNA 1 HGNC:54050 ENSG00000230424 . 101927895 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EMC1-AS1 EMC1 antisense RNA 1 HGNC:54050 ENSG00000230424 . 101927895 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.897335594 knock out down-regulator 7.21E-05 REG00012 EMC1-AS1 EMC1 antisense RNA 1 HGNC:54050 ENSG00000230424 . 101927895 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.696946237 knock down down-regulator 0.011873767 REG00012 HSD11B1-AS1 HSD11B1 antisense RNA 1 HGNC:54053 ENSG00000227591 . 101930114 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.918179431 knock out up-regulate 0.046600778 REG00012 LOC728730 MAP4K3 divergent transcript HGNC:54056 ENSG00000231312 . 728730 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CRIM1-DT CRIM1 divergent transcript HGNC:54057 ENSG00000260025 . 100288911 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.60991023 knock out up-regulate 0.000321859 REG00012 CRIM1-DT CRIM1 divergent transcript HGNC:54057 ENSG00000260025 . 100288911 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.879163273 knock down up-regulate 0.00472432 REG00012 CRIM1-DT CRIM1 divergent transcript HGNC:54057 ENSG00000260025 . 100288911 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.740432532 knock down down-regulator 0.01039772 REG00012 CHROMR Cholesterol induced regulator of metabolism RNA HGNC:54059 ENSG00000223960 . 101927027 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.310535875 knock down down-regulator 0.014675246 REG00012 CHROMR Cholesterol induced regulator of metabolism RNA HGNC:54059 ENSG00000223960 . 101927027 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.85768664 knock down down-regulator 0.045450984 REG00012 CHROMR Cholesterol induced regulator of metabolism RNA HGNC:54059 ENSG00000223960 . 101927027 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.092505239 knock down up-regulate 0.016498646 REG00012 HECW2-AS1 HECW2 antisense RNA 1 HGNC:54062 ENSG00000229056 . 101927482 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.649357585 knock down down-regulator 0.000164715 REG00012 HECW2-AS1 HECW2 antisense RNA 1 HGNC:54062 ENSG00000229056 . 101927482 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.163722894 knock down up-regulate 0.030541652 REG00012 AC062017.1 HDAC4 antisense RNA 1 HGNC:54064 ENSG00000222020 . 101928111 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 HDAC4-AS1 HDAC4 antisense RNA 1 HGNC:54064 ENSG00000222020 . 101928111 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.007803523 knock down up-regulate 2.15E-17 REG00012 NCKAP5-AS2 NCKAP5 antisense RNA 2 HGNC:54065 ENSG00000226953 . 101928161 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.609730791 knock out up-regulate 0.00146573 REG00012 ODC1-DT ODC1 divergent transcript HGNC:54070 ENSG00000257135 . 101929715 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.348660728 knock down up-regulate 8.45E-05 REG00012 ODC1-DT ODC1 divergent transcript HGNC:54070 ENSG00000257135 . 101929715 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.017462008 knock down down-regulator 0.000111765 REG00012 ODC1-DT ODC1 divergent transcript HGNC:54070 ENSG00000257135 . 101929715 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.866180343 knock down up-regulate 0.013060637 REG00012 LINC02614 Long intergenic non-protein coding RNA 2614 HGNC:54072 ENSG00000241288 . 101927056 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.590483942 knock down up-regulate 8.56E-61 REG00012 LINC02614 Long intergenic non-protein coding RNA 2614 HGNC:54072 ENSG00000241288 . 101927056 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.126680713 knock down down-regulator 4.27E-11 REG00012 LINC02614 Long intergenic non-protein coding RNA 2614 HGNC:54072 ENSG00000241288 . 101927056 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.833315137 knock down down-regulator 6.31E-05 REG00012 UBE2D3-AS1 UBE2D3 antisense RNA 1 HGNC:54095 ENSG00000246560 . 105377348 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.938014675 knock down down-regulator 0.010664169 REG00012 UBE2D3-AS1 UBE2D3 antisense RNA 1 HGNC:54095 ENSG00000246560 . 105377348 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -4.099920543 knock down down-regulator 0.000417905 REG00012 LINC02623 Long intergenic non-protein coding RNA 2623 HGNC:54101 ENSG00000234944 . 101929445 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.36287813 knock down down-regulator 0.003633902 REG00012 LOC105378470 long intergenic non-protein coding RNA 2624 HGNC:54103 ENSG00000229775 . 105378470 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC102724589 long intergenic non-protein coding RNA 2626 HGNC:54105 ENSG00000236799 . 102724589 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02637 Long intergenic non-protein coding RNA 2637 HGNC:54120 ENSG00000272430 . 102724350 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.664510289 knock down down-regulator 2.09E-06 REG00012 LINC02637 Long intergenic non-protein coding RNA 2637 HGNC:54120 ENSG00000272430 . 102724350 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.204500858 knock down up-regulate 0.008252333 REG00012 LINC02637 Long intergenic non-protein coding RNA 2637 HGNC:54120 ENSG00000272430 . 102724350 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.75785481 knock down down-regulator 6.51E-16 REG00012 LINC02643 Long intergenic non-protein coding RNA 2643 HGNC:54126 ENSG00000230109 . 105376444 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.834065362 knock out down-regulator 9.00E-07 REG00012 LINC02649 Long intergenic non-protein coding RNA 2649 HGNC:54134 ENSG00000215244 . 399715 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.178219925 knock down up-regulate 0.005029174 REG00012 LASTR LncRNA associated with SART3 regulation of splicing HGNC:54143 ENSG00000242147 . 105376382 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.167796061 knock out up-regulate 0.012056204 REG00012 LASTR LncRNA associated with SART3 regulation of splicing HGNC:54143 ENSG00000242147 . 105376382 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 2.22243036 knock down up-regulate 0.005730895 REG00012 LASTR LncRNA associated with SART3 regulation of splicing HGNC:54143 ENSG00000242147 . 105376382 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -3.596865126 knock down down-regulator 0.002483834 REG00012 LINC02666 Long intergenic non-protein coding RNA 2666 HGNC:54152 ENSG00000283141 . 107984280 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.017329239 knock down down-regulator 1.19E-11 REG00012 LINC02666 Long intergenic non-protein coding RNA 2666 HGNC:54152 ENSG00000283141 . 107984280 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.871833862 knock down down-regulator 1.44E-05 REG00012 LINC02666 Long intergenic non-protein coding RNA 2666 HGNC:54152 ENSG00000283141 . 107984280 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.533276265 knock down down-regulator 7.36E-18 REG00012 LINC02666 Long intergenic non-protein coding RNA 2666 HGNC:54152 ENSG00000283141 . 107984280 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.825343967 knock down up-regulate 2.76E-22 REG00012 MIR378D2HG MIR378D2 host gene HGNC:54166 ENSG00000264448 . 114515521 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.716059042 knock down down-regulator 0.028554331 REG00012 LINC02678 Long intergenic non-protein coding RNA 2678 HGNC:54172 ENSG00000231483 . 105376383 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.627208717 knock down up-regulate 3.97E-07 REG00012 LINC02678 Long intergenic non-protein coding RNA 2678 HGNC:54172 ENSG00000231483 . 105376383 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.694329358 knock down up-regulate 1.34E-22 REG00012 LOC729970 CNN3 divergent transcript HGNC:54176 ENSG00000235501 . 729970 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 CT66 Cancer/testis associated transcript 66 HGNC:54198 ENSG00000234215 . 100507468 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.912615315 knock down up-regulate 0.041049788 REG00012 LINC02697 Long intergenic non-protein coding RNA 2697 HGNC:54211 ENSG00000255327 . 105369586 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.604116852 knock down up-regulate 9.62E-09 REG00012 LINC02697 Long intergenic non-protein coding RNA 2697 HGNC:54211 ENSG00000255327 . 105369586 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.283912678 knock down up-regulate 2.58E-20 REG00012 LINC02697 Long intergenic non-protein coding RNA 2697 HGNC:54211 ENSG00000255327 . 105369586 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.959628435 knock down down-regulator 0.000177112 REG00012 LINC02697 Long intergenic non-protein coding RNA 2697 HGNC:54211 ENSG00000255327 . 105369586 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.690916133 knock down up-regulate 1.33E-19 REG00012 CENATAC-DT CENATAC divergent transcript HGNC:54215 ENSG00000255121 . 107984396 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.342473032 knock down up-regulate 0.008482373 REG00012 CENATAC-DT CENATAC divergent transcript HGNC:54215 ENSG00000255121 . 107984396 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.155267045 knock down down-regulator 0.0154348 REG00012 CENATAC-DT CENATAC divergent transcript HGNC:54215 ENSG00000255121 . 107984396 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.968307798 knock down down-regulator 0.013652092 REG00012 LOC440028 long intergenic non-protein coding RNA 2709 HGNC:54226 ENSG00000245522 . 440028 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02709 Long intergenic non-protein coding RNA 2709 HGNC:54226 ENSG00000245522 . 440028 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.712492794 knock down up-regulate 5.95E-16 REG00012 LINC02709 Long intergenic non-protein coding RNA 2709 HGNC:54226 ENSG00000245522 . 440028 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.897741411 knock down down-regulator 4.72E-24 REG00012 LINC02709 Long intergenic non-protein coding RNA 2709 HGNC:54226 ENSG00000245522 . 440028 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.910935816 knock down down-regulator 1.22E-42 REG00012 LOC105369340 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PPP1R14B-AS1 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.6428 knock down up-regulate 0.002203 REG00012 PPP1R14B-AS1 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.6242 knock down up-regulate 0.04744 REG00012 PPP1R14B-AS1 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.6068 knock down up-regulate 0.01143 REG00012 PPP1R14B-AS1 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.6047 knock down up-regulate 0.0003556 REG00012 PPP1R14B-AS1 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.6497 knock down up-regulate 0.01378 REG00012 PPP1R14B-AS1 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.6567 knock down up-regulate 0.01419 REG00012 PPP1R14B-AS1 PPP1R14B antisense RNA 1 HGNC:54233 ENSG00000256940 . 105369340 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.721 knock down down-regulator 0.005065 REG00012 LINC02718 Long intergenic non-protein coding RNA 2718 HGNC:54235 ENSG00000255418 . 105376592 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.887549059 knock down up-regulate 6.45E-07 REG00012 LINC02718 Long intergenic non-protein coding RNA 2718 HGNC:54235 ENSG00000255418 . 105376592 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 2.518034662 knock down up-regulate 2.18E-82 REG00012 LINC02725 Long intergenic non-protein coding RNA 2725 HGNC:54242 ENSG00000273415 . 105369563 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.810594246 knock down down-regulator 1.33E-22 REG00012 LINC02725 Long intergenic non-protein coding RNA 2725 HGNC:54242 ENSG00000273415 . 105369563 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.82082143 knock down up-regulate 3.86E-07 REG00012 LOC101928865 long intergenic non-protein coding RNA 2728 HGNC:54245 ENSG00000251323 . 101928865 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LINC02732 Long intergenic non-protein coding RNA 2732 HGNC:54249 ENSG00000254416 . 105369486 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.430108412 knock out up-regulate 2.14E-12 REG00012 LINC02732 Long intergenic non-protein coding RNA 2732 HGNC:54249 ENSG00000254416 . 105369486 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.841688467 knock down down-regulator 4.49E-155 REG00012 LINC02732 Long intergenic non-protein coding RNA 2732 HGNC:54249 ENSG00000254416 . 105369486 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.664069646 knock down down-regulator 1.97E-07 REG00012 LINC02732 Long intergenic non-protein coding RNA 2732 HGNC:54249 ENSG00000254416 . 105369486 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.040691278 knock down up-regulate 3.99E-23 REG00012 LINC02732 Long intergenic non-protein coding RNA 2732 HGNC:54249 ENSG00000254416 . 105369486 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.804200801 knock down down-regulator 3.06E-23 REG00012 LINC02735 Long intergenic non-protein coding RNA 2735 HGNC:54252 ENSG00000255433 . 101927120 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -2.446160199 knock out down-regulator 0.000324331 REG00012 LOC105369443 long intergenic non-protein coding RNA 2737 HGNC:54254 ENSG00000256684 . 105369443 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02739 Long intergenic non-protein coding RNA 2739 HGNC:54256 ENSG00000255008 . 105369317 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.041355592 knock down up-regulate 8.94E-06 REG00012 LINC02742 Long intergenic non-protein coding RNA 2742 HGNC:54259 ENSG00000249867 . 105376603 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.871226126 knock down up-regulate 2.73E-07 REG00012 LINC02742 Long intergenic non-protein coding RNA 2742 HGNC:54259 ENSG00000249867 . 105376603 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.179633057 knock down up-regulate 9.53E-10 REG00012 LINC02747 Long intergenic non-protein coding RNA 2747 HGNC:54266 ENSG00000255774 . 105379407 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.85934903 knock out down-regulator 3.89E-25 REG00012 LINC02747 Long intergenic non-protein coding RNA 2747 HGNC:54266 ENSG00000255774 . 105379407 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.678889494 knock down up-regulate 5.36E-05 REG00012 LINC02747 Long intergenic non-protein coding RNA 2747 HGNC:54266 ENSG00000255774 . 105379407 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.20448444 knock down up-regulate 4.05E-12 REG00012 LINC02749 Long intergenic non-protein coding RNA 2749 HGNC:54268 ENSG00000254480 . 100506082 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.521347495 knock out down-regulator 4.13E-37 REG00012 LINC02749 Long intergenic non-protein coding RNA 2749 HGNC:54268 ENSG00000254480 . 100506082 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.593526935 knock down up-regulate 0.000130607 REG00012 LINC02758 Long intergenic non-protein coding RNA 2758 HGNC:54278 ENSG00000248990 . 105376602 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -2.809495161 knock down down-regulator 4.83E-24 REG00012 LINC02758 Long intergenic non-protein coding RNA 2758 HGNC:54278 ENSG00000248990 . 105376602 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.673277211 knock down up-regulate 8.82E-17 REG00012 HIF1A-AS3 HIF1A antisense RNA 3 HGNC:54284 ENSG00000258667 . 105370526 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.89615413 knock down up-regulate 6.30E-13 REG00012 HIF1A-AS3 HIF1A antisense RNA 3 HGNC:54284 ENSG00000258667 . 105370526 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.839287277 knock down up-regulate 0.039905591 REG00012 LINC02765 Long intergenic non-protein coding RNA 2765 HGNC:54285 ENSG00000234476 . 105373110 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.027196688 knock down down-regulator 1.92E-38 REG00012 LINC02765 Long intergenic non-protein coding RNA 2765 HGNC:54285 ENSG00000234476 . 105373110 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.662341883 knock down down-regulator 1.03E-10 REG00012 LINC02766 Long intergenic non-protein coding RNA 2766 HGNC:54286 ENSG00000229484 . 105376744 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.130086713 knock out up-regulate 1.85E-30 REG00012 LINC02777 Long intergenic non-protein coding RNA 2777 HGNC:54297 ENSG00000232453 . 105378753 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.942254002 knock down down-regulator 1.69E-05 REG00012 LINC02777 Long intergenic non-protein coding RNA 2777 HGNC:54297 ENSG00000232453 . 105378753 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.273707098 knock down down-regulator 0.001891422 REG00012 LINC02783 Long intergenic non-protein coding RNA 2783 HGNC:54303 ENSG00000204362 . 400743 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.319708834 knock down down-regulator 1.53E-38 REG00012 LINC02783 Long intergenic non-protein coding RNA 2783 HGNC:54303 ENSG00000204362 . 400743 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.734918222 knock down down-regulator 0.036555431 REG00012 LINC02783 Long intergenic non-protein coding RNA 2783 HGNC:54303 ENSG00000204362 . 400743 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.259219938 knock down down-regulator 5.52E-11 REG00012 MIR3659HG MIR3659 host gene HGNC:54306 ENSG00000224592 . 105378653 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.66364047 knock down down-regulator 0.004778753 REG00012 MIR3659HG MIR3659 host gene HGNC:54306 ENSG00000224592 . 105378653 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.940514663 knock down up-regulate 0.001587547 REG00012 LINC02790 Long intergenic non-protein coding RNA 2790 HGNC:54313 ENSG00000237435 . 102723661 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -3.425041089 knock down down-regulator 3.97E-243 REG00012 LINC02802 Long intergenic non-protein coding RNA 2802 HGNC:54326 ENSG00000232527 . 100996732 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.390475878 knock down up-regulate 8.12E-12 REG00012 LINC02802 Long intergenic non-protein coding RNA 2802 HGNC:54326 ENSG00000232527 . 100996732 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 2.584353335 knock down up-regulate 1.91E-21 REG00012 LINC02802 Long intergenic non-protein coding RNA 2802 HGNC:54326 ENSG00000232527 . 100996732 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.840991419 knock down up-regulate 2.14E-09 REG00012 LINC02802 Long intergenic non-protein coding RNA 2802 HGNC:54326 ENSG00000232527 . 100996732 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.271995593 knock down down-regulator 1.43E-23 REG00012 LINC02803 Long intergenic non-protein coding RNA 2803 HGNC:54328 ENSG00000227740 . 107985228 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.792546038 knock out down-regulator 0.002418956 REG00012 LINC02803 Long intergenic non-protein coding RNA 2803 HGNC:54328 ENSG00000227740 . 107985228 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 2.804130199 knock down up-regulate 1.24E-09 REG00012 LINC02803 Long intergenic non-protein coding RNA 2803 HGNC:54328 ENSG00000227740 . 107985228 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -3.593088946 knock down down-regulator 8.55E-10 REG00012 LINC02804 Long intergenic non-protein coding RNA 2804 HGNC:54338 ENSG00000274372 . 105371228 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 3.262853886 knock down up-regulate 1.09E-57 REG00012 LINC02804 Long intergenic non-protein coding RNA 2804 HGNC:54338 ENSG00000274372 . 105371228 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.871175841 knock down up-regulate 5.18E-06 REG00012 LINC02812 Long intergenic non-protein coding RNA 2812 HGNC:54344 ENSG00000230138 . 107984957 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.248454088 knock down up-regulate 3.09E-08 REG00012 LINC02813 Long intergenic non-protein coding RNA 2813 HGNC:54345 ENSG00000225334 . 107985338 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.875668222 knock down down-regulator 2.19E-62 REG00012 LINC02813 Long intergenic non-protein coding RNA 2813 HGNC:54345 ENSG00000225334 . 107985338 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.766370217 knock down up-regulate 1.06E-09 REG00012 LINC02816 Long intergenic non-protein coding RNA 2816 HGNC:54348 ENSG00000225857 . 105371638 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.213317277 knock out up-regulate 4.26E-55 REG00012 LINC02816 Long intergenic non-protein coding RNA 2816 HGNC:54348 ENSG00000225857 . 105371638 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.664047372 knock down up-regulate 0.000272689 REG00012 LINC02816 Long intergenic non-protein coding RNA 2816 HGNC:54348 ENSG00000225857 . 105371638 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.802936525 knock down up-regulate 8.20E-16 REG00012 LINC02818 Long intergenic non-protein coding RNA 2818 HGNC:54349 ENSG00000231966 . 107985229 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.047714183 knock down down-regulator 9.79E-52 REG00012 LINC02821 Long intergenic non-protein coding RNA 2821 HGNC:54352 ENSG00000257139 . 105369826 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.668454026 knock down up-regulate 0.015904165 REG00012 LINC02821 Long intergenic non-protein coding RNA 2821 HGNC:54352 ENSG00000257139 . 105369826 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.075974583 knock down down-regulator 2.76E-34 REG00012 LINC02821 Long intergenic non-protein coding RNA 2821 HGNC:54352 ENSG00000257139 . 105369826 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.174681935 knock down up-regulate 2.47E-29 REG00012 LINC02827 Long intergenic non-protein coding RNA 2827 HGNC:54358 ENSG00000236908 . 105369606 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 2.077733746 knock down up-regulate 4.03E-07 REG00012 TIAM1-AS1 TIAM1 antisense RNA 1 HGNC:54361 ENSG00000237594 . 150051 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.606058454 knock down down-regulator 0.008783043 REG00012 LINC02842 Long intergenic non-protein coding RNA 2842 HGNC:54378 ENSG00000254119 . 101929628 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.404282944 knock down down-regulator 1.69E-82 REG00012 LINC02842 Long intergenic non-protein coding RNA 2842 HGNC:54378 ENSG00000254119 . 101929628 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.811465086 knock down down-regulator 1.38E-19 REG00012 LINC02846 Long intergenic non-protein coding RNA 2846 HGNC:54381 ENSG00000260193 . 105376323 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.108813936 knock down up-regulate 2.41E-19 REG00012 LINC02846 Long intergenic non-protein coding RNA 2846 HGNC:54381 ENSG00000260193 . 105376323 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.772422411 knock down up-regulate 0.02079468 REG00012 LINC02846 Long intergenic non-protein coding RNA 2846 HGNC:54381 ENSG00000260193 . 105376323 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.25093707 knock down down-regulator 0.008310321 REG00012 LINC02846 Long intergenic non-protein coding RNA 2846 HGNC:54381 ENSG00000260193 . 105376323 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.662366296 knock down up-regulate 0.033118501 REG00012 LINC02848 Long intergenic non-protein coding RNA 2848 HGNC:54384 ENSG00000226581 . 107986806 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.859265838 knock down up-regulate 6.11E-11 REG00012 CCR5AS CCR5 antisense RNA HGNC:54398 ENSG00000223552 . 102724297 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.5982887 knock down down-regulator 0.032809222 REG00012 LOC151484 GPR55 cis regulatory suppressor of immune response RNA HGNC:54400 ENSG00000232520 . 151484 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 RNF213-AS1 RNF213 antisense RNA 1 HGNC:54402 ENSG00000263069 . 100294362 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.09135706 knock down down-regulator 0.016155804 REG00012 LOC102724927 long intergenic non-protein coding RNA 2861 HGNC:54406 ENSG00000262185 . 102724927 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02861 Long intergenic non-protein coding RNA 2861 HGNC:54406 ENSG00000262185 . 102724927 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -4.349315084 knock out down-regulator 0.002151831 REG00012 LINC02861 Long intergenic non-protein coding RNA 2861 HGNC:54406 ENSG00000262185 . 102724927 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.871558814 knock down up-regulate 2.32E-93 REG00012 LINC02861 Long intergenic non-protein coding RNA 2861 HGNC:54406 ENSG00000262185 . 102724927 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -3.238077143 knock down down-regulator 7.04E-36 REG00012 EMSLR E2F1 mRNA stabilizing lncRNA HGNC:54408 ENSG00000232445 . 101927746 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.60228336 knock down down-regulator 0.0222706 REG00012 EMSLR E2F1 mRNA stabilizing lncRNA HGNC:54408 ENSG00000232445 . 101927746 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.587248023 knock down down-regulator 0.045920159 REG00012 EMSLR E2F1 mRNA stabilizing lncRNA HGNC:54408 ENSG00000232445 . 101927746 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.84377907 knock down up-regulate 0.03936989 REG00012 EMSLR E2F1 mRNA stabilizing lncRNA HGNC:54408 ENSG00000232445 . 101927746 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.827237221 knock down up-regulate 0.036947856 REG00012 LNC-LBCS LncRNA bladder and prostate cancer suppressor, hnRNPK interacting HGNC:54418 ENSG00000228412 . 100506885 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.016786789 knock down up-regulate 0.005155327 REG00012 LNC-LBCS LncRNA bladder and prostate cancer suppressor, hnRNPK interacting HGNC:54418 ENSG00000228412 . 100506885 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.752068593 knock down up-regulate 0.004604173 REG00012 SOCAR Serous ovarian cancer associated RNA HGNC:54421 ENSG00000240350 . 105373557 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.781081443 knock down down-regulator 0.000620325 REG00012 SOCAR Serous ovarian cancer associated RNA HGNC:54421 ENSG00000240350 . 105373557 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.374653667 knock down down-regulator 8.35E-05 REG00012 SOCAR Serous ovarian cancer associated RNA HGNC:54421 ENSG00000240350 . 105373557 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 1.737683928 knock out up-regulate 6.68E-06 REG00012 SOCAR Serous ovarian cancer associated RNA HGNC:54421 ENSG00000240350 . 105373557 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.11437923 knock down up-regulate 0.006537294 REG00012 ECI2-DT ECI2 divergent transcript HGNC:54425 ENSG00000234817 . 100507506 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.662723114 knock down up-regulate 0.015071981 REG00012 ECI2-DT ECI2 divergent transcript HGNC:54425 ENSG00000234817 . 100507506 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.40979107 knock down down-regulator 0.029010282 REG00012 STUB1-DT STUB1 divergent transcript HGNC:54519 ENSG00000260394 . 105371184 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.683089812 knock down up-regulate 0.035156154 REG00012 STUB1-DT STUB1 divergent transcript HGNC:54519 ENSG00000260394 . 105371184 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.990775821 knock down down-regulator 0.046157036 REG00012 BREA2 Long intergenic non-protein coding RNA 2878 HGNC:54524 ENSG00000181097 . 286076 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LINC02882 Long intergenic non-protein coding RNA 2882 HGNC:54802 ENSG00000251138 . 100507377 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.681440618 knock out up-regulate 0.002105659 REG00012 MYG1-AS1 MYG1 antisense RNA 1 HGNC:54810 ENSG00000257605 . 112268097 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.074270489 knock down up-regulate 0.003811027 REG00012 MYG1-AS1 MYG1 antisense RNA 1 HGNC:54810 ENSG00000257605 . 112268097 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 2.373616958 knock out up-regulate 0.00025326 REG00012 MYG1-AS1 MYG1 antisense RNA 1 HGNC:54810 ENSG00000257605 . 112268097 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.785391815 knock down up-regulate 0.001789649 REG00012 MYG1-AS1 MYG1 antisense RNA 1 HGNC:54810 ENSG00000257605 . 112268097 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.79334106 knock down up-regulate 0.006126754 REG00012 MYG1-AS1 MYG1 antisense RNA 1 HGNC:54810 ENSG00000257605 . 112268097 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.919602292 knock down up-regulate 0.006197044 REG00012 MYG1-AS1 MYG1 antisense RNA 1 HGNC:54810 ENSG00000257605 . 112268097 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.849019614 knock down down-regulator 0.000235901 REG00012 SLBP-DT SLBP divergent transcript HGNC:54813 ENSG00000270195 . 118568800 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -0.908299812 knock down down-regulator 0.000133279 REG00012 SLBP-DT SLBP divergent transcript HGNC:54813 ENSG00000270195 . 118568800 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.679611707 knock down up-regulate 0.003081866 REG00012 SLBP-DT SLBP divergent transcript HGNC:54813 ENSG00000270195 . 118568800 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.595399737 knock down up-regulate 0.001730792 REG00012 LOC101929595 CYP2U1 and SGMS2 antisense RNA 1 HGNC:54817 ENSG00000245293 . 101929595 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SPCS3-AS1 SPCS3 antisense RNA 1 HGNC:54818 ENSG00000248980 . 116435303 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.625855984 knock down down-regulator 0.034349179 REG00012 SETBP1-DT SETBP1 divergent transcript HGNC:54819 ENSG00000267414 . 101927943 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.740772566 knock down down-regulator 5.41E-07 REG00012 KLRK1-AS1 KLRK1 antisense RNA 1 HGNC:54868 ENSG00000245648 . 101928100 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.876016648 knock down down-regulator 0.000137601 REG00012 KLRK1-AS1 KLRK1 antisense RNA 1 HGNC:54868 ENSG00000245648 . 101928100 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.33094459 knock down up-regulate 3.85E-17 REG00012 KLRK1-AS1 KLRK1 antisense RNA 1 HGNC:54868 ENSG00000245648 . 101928100 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.919905499 knock down down-regulator 2.08E-10 REG00012 KLRK1-AS1 KLRK1 antisense RNA 1 HGNC:54868 ENSG00000245648 . 101928100 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.935418718 knock down up-regulate 3.39E-07 REG00012 LOC200772 up-regulated in colorectal cancer liver metastasis HGNC:54869 ENSG00000233392 . 200772 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 UICLM Up-regulated in colorectal cancer liver metastasis HGNC:54869 ENSG00000233392 . 200772 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.560192944 knock down up-regulate 0.001048645 REG00012 UICLM Up-regulated in colorectal cancer liver metastasis HGNC:54869 ENSG00000233392 . 200772 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 3.05529243 knock down up-regulate 0.000290254 REG00012 PRDX6-AS1 PRDX6 antisense RNA 1 HGNC:54870 ENSG00000203739 . 101928673 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.8713 knock down down-regulator 6.64E-07 REG00012 IRF2-DT IRF2 divergent transcript HGNC:54871 ENSG00000271646 . 117134601 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.11279431 knock down up-regulate 0.000168535 REG00012 IRF2-DT IRF2 divergent transcript HGNC:54871 ENSG00000271646 . 117134601 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.646832663 knock down down-regulator 2.12E-05 REG00012 SLC7A2-IT1 SLC7A2 intronic transcript 1 HGNC:54925 ENSG00000279903 . 0 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.682152092 knock down up-regulate 0.03529442 REG00012 XPC-AS1 XPC antisense RNA 1 HGNC:55014 ENSG00000228242 . 107986063 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.835141243 knock down up-regulate 4.17E-06 REG00012 XPC-AS1 XPC antisense RNA 1 HGNC:55014 ENSG00000228242 . 107986063 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 2.058549278 knock down up-regulate 0.003008433 REG00012 MAP3K4-AS1 MAP3K4 antisense RNA 1 HGNC:55048 ENSG00000272841 . 117981787 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.069449519 knock down up-regulate 6.14E-28 REG00012 MAP3K4-AS1 MAP3K4 antisense RNA 1 HGNC:55048 ENSG00000272841 . 117981787 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.80766655 knock down up-regulate 0.00294709 REG00012 MAP3K4-AS1 MAP3K4 antisense RNA 1 HGNC:55048 ENSG00000272841 . 117981787 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.761124119 knock down down-regulator 9.09E-14 REG00012 MAP3K4-AS1 MAP3K4 antisense RNA 1 HGNC:55048 ENSG00000272841 . 117981787 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.640555705 knock down up-regulate 1.17E-06 REG00012 LINC02889 Long intergenic non-protein coding RNA 2889 HGNC:55071 ENSG00000236039 . 101927630 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.954301598 knock down down-regulator 6.96E-11 REG00012 TMEM167B-DT TMEM167B divergent transcript HGNC:55076 ENSG00000273382 . 105378892 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 2.313311044 knock down up-regulate 0.000219174 REG00012 TMEM167B-DT TMEM167B divergent transcript HGNC:55076 ENSG00000273382 . 105378892 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -2.740334453 knock down down-regulator 8.73E-05 REG00012 CARMAL Coronary artery disease region linked MFGE8 regulatory lncRNA HGNC:55102 ENSG00000260123 . 102724566 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.07279042 knock down up-regulate 0.000101769 REG00012 WDR5-DT WDR5 divergent transcript HGNC:55141 ENSG00000273249 . 118568806 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.771164836 knock down down-regulator 0.004247541 REG00012 WDR5-DT WDR5 divergent transcript HGNC:55141 ENSG00000273249 . 118568806 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.826515054 knock down down-regulator 9.24E-05 REG00012 DUSP5-DT DUSP5 divergent transcript HGNC:55154 ENSG00000273143 . 105378481 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.716349128 knock out down-regulator 0.020598602 REG00012 RALGPS2-AS1 RALGPS2 antisense RNA 1 HGNC:55163 ENSG00000273062 . 646976 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.494958009 knock down down-regulator 0.009972746 REG00012 RALGPS2-AS1 RALGPS2 antisense RNA 1 HGNC:55163 ENSG00000273062 . 646976 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.618333042 knock down down-regulator 0.01790247 REG00012 CSGALNACT2-DT CSGALNACT2 divergent transcript HGNC:55174 ENSG00000273008 . 118568825 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.82581537 knock down down-regulator 0.016161269 REG00012 CSGALNACT2-DT CSGALNACT2 divergent transcript HGNC:55174 ENSG00000273008 . 118568825 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.259076378 knock down down-regulator 0.005022597 REG00012 ARHGEF2-AS2 ARHGEF2 antisense RNA 2 HGNC:55175 ENSG00000273002 . 107985209 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.79450095 knock down down-regulator 0.001628667 REG00012 ARHGEF2-AS2 ARHGEF2 antisense RNA 2 HGNC:55175 ENSG00000273002 . 107985209 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.612203276 knock down down-regulator 0.00014172 REG00012 LRRC8D-DT LRRC8D divergent transcript HGNC:55186 ENSG00000272931 . 118568809 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.599064627 knock out down-regulator 0.000588218 REG00012 LOC102723582 WDR5B divergent transcript HGNC:55192 ENSG00000272758 . 102723582 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 SLC30A6-DT SLC30A6 divergent transcript HGNC:55203 ENSG00000272716 . 118568811 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.614320635 knock down down-regulator 0.004631897 REG00012 SLC30A6-DT SLC30A6 divergent transcript HGNC:55203 ENSG00000272716 . 118568811 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.646131368 knock down down-regulator 6.03E-05 REG00012 HNRNPD-DT HNRNPD divergent transcript HGNC:55205 ENSG00000272677 . 101928963 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.114910448 knock down down-regulator 0.003125671 REG00012 TIMMDC1-DT TIMMDC1 divergent transcript HGNC:55207 ENSG00000272662 . 118568812 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.879421232 knock out down-regulator 2.06E-06 REG00012 TIMMDC1-DT TIMMDC1 divergent transcript HGNC:55207 ENSG00000272662 . 118568812 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.920002874 knock down down-regulator 0.005063421 REG00012 TIMMDC1-DT TIMMDC1 divergent transcript HGNC:55207 ENSG00000272662 . 118568812 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.911632946 knock down down-regulator 7.83E-06 REG00012 H3-3A-DT H3-3A divergent transcript HGNC:55210 ENSG00000272562 . 118568813 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.680355467 knock down down-regulator 2.29E-68 REG00012 H3-3A-DT H3-3A divergent transcript HGNC:55210 ENSG00000272562 . 118568813 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.951251584 knock down up-regulate 3.34E-16 REG00012 BTF3-DT BTF3 divergent transcript HGNC:55211 ENSG00000272525 . 118568828 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.941949146 knock down up-regulate 2.26E-07 REG00012 BTF3-DT BTF3 divergent transcript HGNC:55211 ENSG00000272525 . 118568828 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 3.63153754 knock down up-regulate 9.07E-11 REG00012 FAM193B-DT FAM193B divergent transcript HGNC:55212 ENSG00000272459 . 105377750 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.875780497 knock down up-regulate 0.046615579 REG00012 FAM193B-DT FAM193B divergent transcript HGNC:55212 ENSG00000272459 . 105377750 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 4.103916452 knock down up-regulate 0.043530283 REG00012 LOC101929243 ILRUN antisense RNA 1 HGNC:55216 ENSG00000272288 . 101929243 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ILRUN-AS1 ILRUN antisense RNA 1 HGNC:55216 ENSG00000272288 . 101929243 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.918420513 knock down up-regulate 0.045552653 REG00012 ILRUN-AS1 ILRUN antisense RNA 1 HGNC:55216 ENSG00000272288 . 101929243 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -2.520663402 knock down down-regulator 0.025638793 REG00012 LOC105374952 NUP153 antisense RNA 1 HGNC:55217 ENSG00000272269 . 105374952 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 NUP153-AS1 NUP153 antisense RNA 1 HGNC:55217 ENSG00000272269 . 105374952 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.029152476 knock down down-regulator 0.011747189 REG00012 NUP153-AS1 NUP153 antisense RNA 1 HGNC:55217 ENSG00000272269 . 105374952 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.685958374 knock down up-regulate 0.001791819 REG00012 PDE7A-DT PDE7A divergent transcript HGNC:55223 ENSG00000272192 . 118568829 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.785716366 knock down down-regulator 0.001206278 REG00012 PDE7A-DT PDE7A divergent transcript HGNC:55223 ENSG00000272192 . 118568829 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.645475515 knock down down-regulator 0.001071032 REG00012 THBS1-IT1 THBS1 intronic transcript 1 HGNC:55225 ENSG00000276107 . 118597829 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.760894058 knock down up-regulate 0.036067343 REG00012 THBS1-IT1 THBS1 intronic transcript 1 HGNC:55225 ENSG00000276107 . 118597829 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.67995356 knock down down-regulator 0.041103024 REG00012 THBS1-IT1 THBS1 intronic transcript 1 HGNC:55225 ENSG00000276107 . 118597829 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.616291552 knock down down-regulator 0.000608512 REG00012 THBS1-IT1 THBS1 intronic transcript 1 HGNC:55225 ENSG00000276107 . 118597829 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.62268402 knock down down-regulator 0.002569852 REG00012 GRAPLDR GRAPL long non-coding downstream RNA HGNC:55226 ENSG00000262292 . 118597830 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.86170416 knock down up-regulate 1.01E-61 REG00012 GRAPLDR GRAPL long non-coding downstream RNA HGNC:55226 ENSG00000262292 . 118597830 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.526460713 knock down up-regulate 1.60E-36 REG00012 TMEM14B-DT TMEM14B divergent transcript HGNC:55230 ENSG00000272097 . 118597831 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -3.521608771 knock down down-regulator 2.48E-06 REG00012 TMEM14B-DT TMEM14B divergent transcript HGNC:55230 ENSG00000272097 . 118597831 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -2.295970073 knock down down-regulator 5.14E-05 REG00012 BCAN-AS1 BCAN antisense RNA 1 HGNC:55233 ENSG00000272068 . 105371453 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -4.441811688 knock down down-regulator 2.44E-40 REG00012 BCAN-AS1 BCAN antisense RNA 1 HGNC:55233 ENSG00000272068 . 105371453 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.76957677 knock down down-regulator 0.001611685 REG00012 BCAN-AS1 BCAN antisense RNA 1 HGNC:55233 ENSG00000272068 . 105371453 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.301071549 knock down up-regulate 1.22E-147 REG00012 BCAN-AS1 BCAN antisense RNA 1 HGNC:55233 ENSG00000272068 . 105371453 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.324674306 knock down down-regulator 7.41E-06 REG00012 BCAN-AS1 BCAN antisense RNA 1 HGNC:55233 ENSG00000272068 . 105371453 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.97759702 knock down up-regulate 0.011613832 REG00012 BCAN-AS1 BCAN antisense RNA 1 HGNC:55233 ENSG00000272068 . 105371453 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.441320578 knock down up-regulate 1.55E-55 REG00012 BCAN-AS1 BCAN antisense RNA 1 HGNC:55233 ENSG00000272068 . 105371453 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.90760405 knock down up-regulate 6.92E-31 REG00012 ANKH-DT ANKH divergent transcript HGNC:55234 ENSG00000272057 . 118597842 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.105965438 knock down down-regulator 0.036858151 REG00012 ANKH-DT ANKH divergent transcript HGNC:55234 ENSG00000272057 . 118597842 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.571926023 knock down up-regulate 0.009514228 REG00012 PNRC1-DT PNRC1 divergent transcript HGNC:55238 ENSG00000271931 . 118597843 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.916752273 knock down up-regulate 0.000164347 REG00012 PNRC1-DT PNRC1 divergent transcript HGNC:55238 ENSG00000271931 . 118597843 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.668960452 knock down up-regulate 0.00638175 REG00012 TAGAP-AS1 TAGAP antisense RNA 1 HGNC:55239 ENSG00000271913 . 105378083 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.688669314 knock down down-regulator 0.049466016 REG00012 TAGAP-AS1 TAGAP antisense RNA 1 HGNC:55239 ENSG00000271913 . 105378083 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.641240385 knock down up-regulate 0.000600338 REG00012 DCTN6-DT DCTN6 divergent transcript HGNC:55241 ENSG00000271869 . 118597835 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 3.120180154 knock down up-regulate 1.75E-07 REG00012 DCTN6-DT DCTN6 divergent transcript HGNC:55241 ENSG00000271869 . 118597835 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 3.120180154 knock down up-regulate 1.75E-07 REG00012 DCTN6-DT DCTN6 divergent transcript HGNC:55241 ENSG00000271869 . 118597835 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 3.120180154 knock down up-regulate 1.75E-07 REG00012 DCTN6-DT DCTN6 divergent transcript HGNC:55241 ENSG00000271869 . 118597835 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 2.054847509 knock down up-regulate 8.12E-08 REG00012 DCTN6-DT DCTN6 divergent transcript HGNC:55241 ENSG00000271869 . 118597835 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.748217692 knock down up-regulate 7.82E-05 REG00012 DCTN6-DT DCTN6 divergent transcript HGNC:55241 ENSG00000271869 . 118597835 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.182683399 knock down up-regulate 0.003108374 REG00012 DCTN6-DT DCTN6 divergent transcript HGNC:55241 ENSG00000271869 . 118597835 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.6721129 knock down up-regulate 0.018141678 REG00012 PDCD6IP-DT PDCD6IP divergent transcript HGNC:55244 ENSG00000271643 . 105377023 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.608330844 knock down down-regulator 0.000505143 REG00012 PDCD6IP-DT PDCD6IP divergent transcript HGNC:55244 ENSG00000271643 . 105377023 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.864455546 knock down down-regulator 0.000404359 REG00012 PDCD6IP-DT PDCD6IP divergent transcript HGNC:55244 ENSG00000271643 . 105377023 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.735585453 knock down down-regulator 0.0191776 REG00012 PDCD6IP-DT PDCD6IP divergent transcript HGNC:55244 ENSG00000271643 . 105377023 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.160195648 knock down down-regulator 0.003666779 REG00012 IKBKB-DT IKBKB divergent transcript HGNC:55254 ENSG00000253408 . 101929897 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.388104544 knock down down-regulator 0.02999403 REG00012 IKBKB-DT IKBKB divergent transcript HGNC:55254 ENSG00000253408 . 101929897 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.791706234 knock down down-regulator 0.004895853 REG00012 ST8SIA5-DT ST8SIA5 divergent transcript HGNC:55267 ENSG00000270112 . 105372097 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.352309627 knock down down-regulator 0.000139413 REG00012 ST8SIA5-DT ST8SIA5 divergent transcript HGNC:55267 ENSG00000270112 . 105372097 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.721779366 knock down down-regulator 0.045890726 REG00012 LOC101928659 C16orf95 divergent transcript HGNC:55269 ENSG00000270006 . 101928659 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ZNF132-DT ZNF132 divergent transcript HGNC:55273 ENSG00000269473 . 118827803 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.460997961 knock down down-regulator 0.003715774 REG00012 ZNF132-DT ZNF132 divergent transcript HGNC:55273 ENSG00000269473 . 118827803 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.259149615 knock down down-regulator 0.014748562 REG00012 ZNF132-DT ZNF132 divergent transcript HGNC:55273 ENSG00000269473 . 118827803 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -2.707835709 knock down down-regulator 0.047891106 REG00012 PGLS-DT PGLS divergent transcript HGNC:55274 ENSG00000269439 . 100507551 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.823388478 knock down down-regulator 6.55E-05 REG00012 PGLS-DT PGLS divergent transcript HGNC:55274 ENSG00000269439 . 100507551 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.147940948 knock down up-regulate 0.002973911 REG00012 GRAMD1A-AS1 GRAMD1A antisense RNA 1 HGNC:55275 ENSG00000269303 . 118827804 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.882345815 knock down down-regulator 0.006386602 REG00012 GRAMD1A-AS1 GRAMD1A antisense RNA 1 HGNC:55275 ENSG00000269303 . 118827804 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.64950378 knock down down-regulator 0.007060712 REG00012 MAST3-AS1 MAST3 antisense RNA 1 HGNC:55276 ENSG00000269145 . 118827815 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.615159966 knock down up-regulate 2.45E-08 REG00012 LOC105372483 ZNF497 antisense RNA 1 HGNC:55277 ENSG00000269054 . 105372483 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ZNF497-AS1 ZNF497 antisense RNA 1 HGNC:55277 ENSG00000269054 . 105372483 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.338706773 knock down down-regulator 0.017765897 REG00012 ZNF497-AS1 ZNF497 antisense RNA 1 HGNC:55277 ENSG00000269054 . 105372483 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -1.756661695 knock down down-regulator 0.005042594 REG00012 SF1-DT SF1 divergent transcript HGNC:55278 ENSG00000269038 . 118827805 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.714100875 knock down down-regulator 0.0232872 REG00012 SF1-DT SF1 divergent transcript HGNC:55278 ENSG00000269038 . 118827805 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.769590693 knock down up-regulate 0.00089061 REG00012 LOC101927884 EVA1A antisense RNA HGNC:55283 ENSG00000231172 . 101927884 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 EVA1A-AS EVA1A antisense RNA HGNC:55283 ENSG00000231172 . 101927884 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.066392946 knock down up-regulate 0.00048974 REG00012 EVA1A-AS EVA1A antisense RNA HGNC:55283 ENSG00000231172 . 101927884 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.787111157 knock down up-regulate 0.040300945 REG00012 EVA1A-AS EVA1A antisense RNA HGNC:55283 ENSG00000231172 . 101927884 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.700799422 knock down up-regulate 0.000705469 REG00012 EVA1A-AS EVA1A antisense RNA HGNC:55283 ENSG00000231172 . 101927884 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.688128396 knock down up-regulate 0.019214276 REG00012 CBARP-DT CBARP divergent transcript HGNC:55285 ENSG00000267778 . 118827813 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.832606439 knock out up-regulate 0.030853512 REG00012 BSG-AS1 BSG antisense RNA 1 HGNC:55286 ENSG00000267751 . 105372233 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.023260131 knock down up-regulate 2.70E-07 REG00012 GNA15-DT GNA15 divergent transcript HGNC:55293 ENSG00000267551 . 100996351 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.187573197 knock down up-regulate 0.001864107 REG00012 GNA15-DT GNA15 divergent transcript HGNC:55293 ENSG00000267551 . 100996351 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.602263792 knock down down-regulator 0.020178582 REG00012 KDSR-DT KDSR divergent transcript HGNC:55299 ENSG00000267390 . 118827811 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.630349852 knock down up-regulate 5.42E-13 REG00012 KDSR-DT KDSR divergent transcript HGNC:55299 ENSG00000267390 . 118827811 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.669009703 knock down up-regulate 5.30E-13 REG00012 LOC400684 DPY19L3 divergent transcript HGNC:55307 ENSG00000267213 . 400684 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DPY19L3-DT DPY19L3 divergent transcript HGNC:55307 ENSG00000267213 . 400684 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.631618913 knock down up-regulate 0.032005071 REG00012 DPY19L3-DT DPY19L3 divergent transcript HGNC:55307 ENSG00000267213 . 400684 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.807221453 knock down down-regulator 0.001278612 REG00012 DPY19L3-DT DPY19L3 divergent transcript HGNC:55307 ENSG00000267213 . 400684 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.592077285 knock down down-regulator 0.001062884 REG00012 ZNF45-AS1 ZNF45 antisense RNA 1 HGNC:55308 ENSG00000267191 . 118827818 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.184395112 knock down down-regulator 0.002610324 REG00012 LOC100507373 ADGRL1 antisense RNA 1 HGNC:55309 ENSG00000267169 . 100507373 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ADGRL1-AS1 ADGRL1 antisense RNA 1 HGNC:55309 ENSG00000267169 . 100507373 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.022909382 knock down up-regulate 0.033557414 REG00012 ADGRL1-AS1 ADGRL1 antisense RNA 1 HGNC:55309 ENSG00000267169 . 100507373 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.777051325 knock down down-regulator 0.00751466 REG00012 FMNL1-DT FMNL1 divergent transcript HGNC:55311 ENSG00000267121 . 339192 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -2.881270923 knock out down-regulator 6.95E-40 REG00012 FMNL1-DT FMNL1 divergent transcript HGNC:55311 ENSG00000267121 . 339192 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.031527936 knock down up-regulate 0.042916832 REG00012 FMNL1-DT FMNL1 divergent transcript HGNC:55311 ENSG00000267121 . 339192 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.894670396 knock down down-regulator 4.55E-06 REG00012 RANBP3-DT RANBP3 divergent transcript HGNC:55312 ENSG00000266983 . 100128568 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.593214961 knock down down-regulator 0.025525592 REG00012 RANBP3-DT RANBP3 divergent transcript HGNC:55312 ENSG00000266983 . 100128568 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.96299937 knock down down-regulator 0.033924094 REG00012 CEP192-DT CEP192 divergent transcript HGNC:55313 ENSG00000266969 . 119139898 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.421927429 knock out down-regulator 0.018564859 REG00012 CEP192-DT CEP192 divergent transcript HGNC:55313 ENSG00000266969 . 119139898 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.421927429 knock down down-regulator 0.018564859 REG00012 CEP192-DT CEP192 divergent transcript HGNC:55313 ENSG00000266969 . 119139898 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.421927429 knock down down-regulator 0.018564859 REG00012 GREB1L-DT GREB1L divergent transcript HGNC:55323 ENSG00000265984 . 101927496 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.807806338 knock down down-regulator 6.75E-12 REG00012 GREB1L-DT GREB1L divergent transcript HGNC:55323 ENSG00000265984 . 101927496 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.995327931 knock down up-regulate 5.98E-11 REG00012 LOC101927989 ZNF516 antisense RNA 1 HGNC:55324 ENSG00000265778 . 101927989 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC643542 DSEL antisense RNA 1 HGNC:55325 ENSG00000265533 . 643542 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NARF-AS2 NARF antisense RNA 2 HGNC:55327 ENSG00000265458 . 105371941 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.625823233 knock down up-regulate 0.001516224 REG00012 NARF-AS2 NARF antisense RNA 2 HGNC:55327 ENSG00000265458 . 105371941 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.838470365 knock down up-regulate 0.000825744 REG00012 MIR4733HG MIR4733 host gene HGNC:55332 ENSG00000264107 . 119139899 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.758145352 knock down down-regulator 0.016601176 REG00012 MIR4733HG MIR4733 host gene HGNC:55332 ENSG00000264107 . 119139899 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.75364131 knock down up-regulate 0.001973169 REG00012 MIR4733HG MIR4733 host gene HGNC:55332 ENSG00000264107 . 119139899 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.644077759 knock down down-regulator 0.002228763 REG00012 MIR4733HG MIR4733 host gene HGNC:55332 ENSG00000264107 . 119139899 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.68126366 knock down up-regulate 0.011173263 REG00012 MIR4733HG MIR4733 host gene HGNC:55332 ENSG00000264107 . 119139899 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 2.609293497 knock down up-regulate 0.016773694 REG00012 MIR4733HG MIR4733 host gene HGNC:55332 ENSG00000264107 . 119139899 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.836396127 knock down up-regulate 0.000466449 REG00012 MIF4GD-DT MIF4GD divergent transcript HGNC:55335 ENSG00000263843 . 100287042 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.673247876 knock down up-regulate 0.03257298 REG00012 AKAP1-DT AKAP1 divergent transcript HGNC:55339 ENSG00000263004 . 119139901 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.778581926 knock out up-regulate 1.07E-05 REG00012 AKAP1-DT AKAP1 divergent transcript HGNC:55339 ENSG00000263004 . 119139901 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.95253881 knock down up-regulate 9.27E-05 REG00012 AKAP1-DT AKAP1 divergent transcript HGNC:55339 ENSG00000263004 . 119139901 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.780992318 knock down up-regulate 4.70E-11 REG00012 CAMTA2-AS1 CAMTA2 antisense RNA 1 HGNC:55342 ENSG00000262678 . 101927979 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.652791658 knock down down-regulator 0.001810556 REG00012 CAMTA2-AS1 CAMTA2 antisense RNA 1 HGNC:55342 ENSG00000262678 . 101927979 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.674905683 knock down down-regulator 0.000515645 REG00012 GOSR2-DT GOSR2 divergent transcript HGNC:55346 ENSG00000261886 . 119139904 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.829284087 knock down down-regulator 0.015283158 REG00012 GOSR2-DT GOSR2 divergent transcript HGNC:55346 ENSG00000261886 . 119139904 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.910192755 knock down up-regulate 0.007729417 REG00012 GOSR2-DT GOSR2 divergent transcript HGNC:55346 ENSG00000261886 . 119139904 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.693349156 knock down up-regulate 0.009143692 REG00012 ZNF594-DT ZNF594 divergent transcript HGNC:55347 ENSG00000261879 . 100130950 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -3.116695115 knock down down-regulator 3.33E-05 REG00012 LOC100506083 DDX19A divergent transcript HGNC:55349 ENSG00000261777 . 100506083 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 DDX19A-DT DDX19A divergent transcript HGNC:55349 ENSG00000261777 . 100506083 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.375039617 knock down up-regulate 0.005508375 REG00012 DDX19A-DT DDX19A divergent transcript HGNC:55349 ENSG00000261777 . 100506083 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.375039617 knock down up-regulate 0.005508375 REG00012 DDX3ILA1 DDX3 interacting lncRNA 1 HGNC:55358 ENSG00000232756 . 105375368 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.406758922 knock down down-regulator 0.018664053 REG00012 DDX3ILA1 DDX3 interacting lncRNA 1 HGNC:55358 ENSG00000232756 . 105375368 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.603577971 knock down up-regulate 0.002197269 REG00012 CARHSP1-DT CARHSP1 divergent transcript HGNC:55361 ENSG00000261481 . 119545623 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.095802191 knock down down-regulator 0.001197961 REG00012 CARHSP1-DT CARHSP1 divergent transcript HGNC:55361 ENSG00000261481 . 119545623 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.624064478 knock down up-regulate 0.006987991 REG00012 LOC102723385 COQ7 divergent transcript HGNC:55362 ENSG00000261465 . 102723385 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 POLG-DT POLG divergent transcript HGNC:55363 ENSG00000261441 . 119545629 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.267367503 knock down down-regulator 0.0006558 REG00012 POLG-DT POLG divergent transcript HGNC:55363 ENSG00000261441 . 119545629 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.736015988 knock down up-regulate 0.002725023 REG00012 ST3GAL1-DT ST3GAL1 divergent transcript HGNC:55372 ENSG00000261220 . 119545630 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.665656308 knock down down-regulator 0.021615078 REG00012 TFIP11-DT TFIP11 divergent transcript HGNC:55374 ENSG00000261188 . 100507599 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.626752134 knock down up-regulate 0.022010883 REG00012 TFIP11-DT TFIP11 divergent transcript HGNC:55374 ENSG00000261188 . 100507599 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.78766244 knock down up-regulate 0.021084164 REG00012 TFIP11-DT TFIP11 divergent transcript HGNC:55374 ENSG00000261188 . 100507599 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.737985874 knock down up-regulate 0.016330206 REG00012 TFIP11-DT TFIP11 divergent transcript HGNC:55374 ENSG00000261188 . 100507599 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.221218522 knock down up-regulate 0.000272148 REG00012 PAPOLA-DT PAPOLA divergent transcript HGNC:55380 ENSG00000260806 . 730202 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.415441834 knock down down-regulator 0.044976499 REG00012 ITPRID2-DT ITPRID2 divergent transcript HGNC:55386 ENSG00000260742 . 119863860 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.873070946 knock down up-regulate 0.001963032 REG00012 ITPRID2-DT ITPRID2 divergent transcript HGNC:55386 ENSG00000260742 . 119863860 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.006467974 knock down up-regulate 2.57E-05 REG00012 TBC1D22A-DT TBC1D22A divergent transcript HGNC:55388 ENSG00000260708 . 119863861 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.763812743 knock down up-regulate 0.016847672 REG00012 PPM1L-DT PPM1L divergent transcript HGNC:55390 ENSG00000260572 . 119863869 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.6092 knock down up-regulate 0.02442 REG00012 ATP8A1-DT ATP8A1 divergent transcript HGNC:55392 ENSG00000260519 . 119863863 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.444538795 knock down down-regulator 9.53E-277 REG00012 CDH8-AS1 CDH8 antisense RNA 1 HGNC:55399 ENSG00000260115 . 119863871 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.617353316 knock out down-regulator 0.022429454 REG00012 CDH8-AS1 CDH8 antisense RNA 1 HGNC:55399 ENSG00000260115 . 119863871 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.902787271 knock down up-regulate 0.033968122 REG00012 CDH8-AS1 CDH8 antisense RNA 1 HGNC:55399 ENSG00000260115 . 119863871 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.977731156 knock down up-regulate 0.008707302 REG00012 DYNLRB2-AS1 DYNLRB2 antisense RNA 1 HGNC:55405 ENSG00000259867 . 102724084 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.849270896 knock down up-regulate 0.028891185 REG00012 DYNLRB2-AS1 DYNLRB2 antisense RNA 1 HGNC:55405 ENSG00000259867 . 102724084 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.64364101 knock down up-regulate 0.040355158 REG00012 HEATR3-AS1 HEATR3 antisense RNA 1 HGNC:55406 ENSG00000259843 . 120017339 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.377024454 knock down down-regulator 0.040326012 REG00012 HEATR3-AS1 HEATR3 antisense RNA 1 HGNC:55406 ENSG00000259843 . 120017339 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.189767585 knock down down-regulator 2.59E-10 REG00012 CTCF-DT CTCF divergent transcript HGNC:55409 ENSG00000259804 . 107984813 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.728922597 knock down down-regulator 0.00423197 REG00012 CTCF-DT CTCF divergent transcript HGNC:55409 ENSG00000259804 . 107984813 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.888277946 knock down up-regulate 0.002435698 REG00012 LOC100131315 GREM1 antisense RNA 1 HGNC:55411 ENSG00000259721 . 100131315 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 GREM1-AS1 GREM1 antisense RNA 1 HGNC:55411 ENSG00000259721 . 100131315 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.958845963 knock down up-regulate 1.19E-05 REG00012 GREM1-AS1 GREM1 antisense RNA 1 HGNC:55411 ENSG00000259721 . 100131315 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.693669993 knock down up-regulate 1.27E-14 REG00012 LOC101927751 ALDH1A3 antisense RNA 1 HGNC:55416 ENSG00000259583 . 101927751 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 APPBP2-DT APPBP2 divergent transcript HGNC:55423 ENSG00000259349 . 120017341 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.87464386 knock down up-regulate 0.007075235 REG00012 APPBP2-DT APPBP2 divergent transcript HGNC:55423 ENSG00000259349 . 120017341 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.749764122 knock down down-regulator 0.000884349 REG00012 APPBP2-DT APPBP2 divergent transcript HGNC:55423 ENSG00000259349 . 120017341 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.643184761 knock down down-regulator 2.61E-05 REG00012 APPBP2-DT APPBP2 divergent transcript HGNC:55423 ENSG00000259349 . 120017341 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.596709792 knock down up-regulate 1.39E-05 REG00012 SIPA1L1-AS1 SIPA1L1 antisense RNA 1 HGNC:55432 ENSG00000259146 . 102724015 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.630324282 knock out up-regulate 0.000622019 REG00012 SIPA1L1-AS1 SIPA1L1 antisense RNA 1 HGNC:55432 ENSG00000259146 . 102724015 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.6784845 knock down down-regulator 9.41E-06 REG00012 SIPA1L1-AS1 SIPA1L1 antisense RNA 1 HGNC:55432 ENSG00000259146 . 102724015 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.874983353 knock down up-regulate 0.000379223 REG00012 LOC100288846 MIA2 antisense RNA 1 HGNC:55436 ENSG00000258940 . 100288846 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 MIA2-AS1 MIA2 antisense RNA 1 HGNC:55436 ENSG00000258940 . 100288846 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.836262735 knock out down-regulator 0.004301106 REG00012 CCDC88C-DT CCDC88C divergent transcript HGNC:55438 ENSG00000258798 . 105370625 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.792285149 knock out up-regulate 0.040609027 REG00012 BAZ1A-AS1 BAZ1A antisense RNA 1 HGNC:55440 ENSG00000258738 . 112268124 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.900289022 knock down down-regulator 1.57E-11 REG00012 BAZ1A-AS1 BAZ1A antisense RNA 1 HGNC:55440 ENSG00000258738 . 112268124 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.040846258 knock down down-regulator 0.034785746 REG00012 LOC102724814 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 AP1G2-AS1 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.740467602 knock down up-regulate 0.005990252 REG00012 AP1G2-AS1 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.931373237 knock down down-regulator 0.003970329 REG00012 AP1G2-AS1 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.88637878 knock down up-regulate 0.000546256 REG00012 AP1G2-AS1 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.605277638 knock down up-regulate 0.035357766 REG00012 AP1G2-AS1 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.688020037 knock down up-regulate 0.036174342 REG00012 AP1G2-AS1 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.792691484 knock down down-regulator 0.005565574 REG00012 AP1G2-AS1 AP1G2 antisense RNA 1 HGNC:55442 ENSG00000258727 . 102724814 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.689153095 knock down up-regulate 0.000933296 REG00012 LRFN5-DT LRFN5 divergent transcript HGNC:55444 ENSG00000258636 . 105370469 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.712237406 knock down down-regulator 0.003633795 REG00012 LRFN5-DT LRFN5 divergent transcript HGNC:55444 ENSG00000258636 . 105370469 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.003104398 knock down up-regulate 0.000719541 REG00012 OXA1L-DT OXA1L divergent transcript HGNC:55448 ENSG00000258458 . 105370404 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.534195088 knock down up-regulate 0.000197941 REG00012 AJUBA-DT AJUBA divergent transcript HGNC:55449 ENSG00000258457 . 107984660 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.599589552 knock down up-regulate 0.004381652 REG00012 AJUBA-DT AJUBA divergent transcript HGNC:55449 ENSG00000258457 . 107984660 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.804684977 knock out up-regulate 0.016556094 REG00012 AJUBA-DT AJUBA divergent transcript HGNC:55449 ENSG00000258457 . 107984660 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.25095257 knock down up-regulate 0.001063129 REG00012 AJUBA-DT AJUBA divergent transcript HGNC:55449 ENSG00000258457 . 107984660 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.588459419 knock down up-regulate 5.54E-07 REG00012 AJUBA-DT AJUBA divergent transcript HGNC:55449 ENSG00000258457 . 107984660 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.177936274 knock down up-regulate 0.013397631 REG00012 LOC101927267 TROAP and PRPH antisense RNA 1 HGNC:55453 ENSG00000258334 . 101927267 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PPP1R12A-AS2 PPP1R12A antisense RNA 2 HGNC:55456 ENSG00000258048 . 105369864 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.673 knock down up-regulate 0.03708 REG00012 PPP1R12A-AS2 PPP1R12A antisense RNA 2 HGNC:55456 ENSG00000258048 . 105369864 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.8672 knock down up-regulate 0.01471 REG00012 PHLDA1-AS1 PHLDA1 antisense RNA 1 HGNC:55461 ENSG00000257453 . 120766149 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.698041804 knock down down-regulator 0.000269624 REG00012 PHLDA1-AS1 PHLDA1 antisense RNA 1 HGNC:55461 ENSG00000257453 . 120766149 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.0598326 knock down up-regulate 0.000642251 REG00012 MYL6B-AS1 MYL6B antisense RNA 1 HGNC:55472 ENSG00000257809 . 120766150 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.728744641 knock down down-regulator 0.019380834 REG00012 UHRF1BP1L-DT UHRF1BP1L divergent transcript HGNC:55473 ENSG00000257696 . 120766146 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.10889724 knock down down-regulator 0.000588371 REG00012 UHRF1BP1L-DT UHRF1BP1L divergent transcript HGNC:55473 ENSG00000257696 . 120766146 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.774668722 knock down down-regulator 0.006363641 REG00012 MIRLET7IHG MIRLET7I host gene HGNC:55478 ENSG00000257354 . 120766144 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.125503237 knock down down-regulator 0.0138578 REG00012 MIRLET7IHG MIRLET7I host gene HGNC:55478 ENSG00000257354 . 120766144 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.963227659 knock down down-regulator 0.000657824 REG00012 PRMT5-DT PRMT5 divergent transcript HGNC:55482 ENSG00000257285 . 101926933 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.965358069 knock out down-regulator 0.001791561 REG00012 PRMT5-DT PRMT5 divergent transcript HGNC:55482 ENSG00000257285 . 101926933 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.588428265 knock down down-regulator 0.035419283 REG00012 PRMT5-DT PRMT5 divergent transcript HGNC:55482 ENSG00000257285 . 101926933 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.927737555 knock down down-regulator 0.016550619 REG00012 ARHGEF17-AS1 ARHGEF17 antisense RNA 1 HGNC:55485 ENSG00000257038 . 100287837 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.861824459 knock out down-regulator 1.10E-09 REG00012 ARHGEF17-AS1 ARHGEF17 antisense RNA 1 HGNC:55485 ENSG00000257038 . 100287837 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.861116297 knock down down-regulator 0.018166757 REG00012 ARHGEF17-AS1 ARHGEF17 antisense RNA 1 HGNC:55485 ENSG00000257038 . 100287837 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.862007099 knock down down-regulator 0.000480791 REG00012 LOC101928069 DPP3 divergent transcript HGNC:55494 ENSG00000255517 . 101928069 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LOC101929089 TTC36 and KMT2A antisense RNA 1 HGNC:55495 ENSG00000255435 . 101929089 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PATL1-DT PATL1 divergent transcript HGNC:55501 ENSG00000255355 . 120883613 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.746790147 knock down up-regulate 1.01E-05 REG00012 PATL1-DT PATL1 divergent transcript HGNC:55501 ENSG00000255355 . 120883613 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.651757859 knock down down-regulator 0.000210858 REG00012 LOC101928424 TMEM123 divergent transcript HGNC:55502 ENSG00000255337 . 101928424 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TMEM123-DT TMEM123 divergent transcript HGNC:55502 ENSG00000255337 . 101928424 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.328002388 knock down down-regulator 0.000709963 REG00012 TMEM123-DT TMEM123 divergent transcript HGNC:55502 ENSG00000255337 . 101928424 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -2.47851278 knock down down-regulator 2.42E-05 REG00012 TMEM123-DT TMEM123 divergent transcript HGNC:55502 ENSG00000255337 . 101928424 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.832204002 knock down up-regulate 0.00824808 REG00012 TPBGL-AS1 TPBGL antisense RNA 1 HGNC:55506 ENSG00000255136 . 120883615 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.564611138 knock down down-regulator 3.82E-05 REG00012 TTC12-DT TTC12 divergent transcript HGNC:55508 ENSG00000255129 . 120883617 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.205974301 knock down down-regulator 0.001088885 REG00012 TSKU-AS1 TSKU antisense RNA 1 HGNC:55509 ENSG00000255100 . 101928837 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.836074204 knock down down-regulator 0.000495774 REG00012 TSKU-AS1 TSKU antisense RNA 1 HGNC:55509 ENSG00000255100 . 101928837 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.286390172 knock down up-regulate 0.00113312 REG00012 NECTIN1-DT NECTIN1 divergent transcript HGNC:55513 ENSG00000254854 . 102724301 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.610228744 knock down up-regulate 0.002189108 REG00012 ADM-DT ADM divergent transcript HGNC:55516 ENSG00000254554 . 105376544 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 4.609290666 knock down up-regulate 0.041707303 REG00012 ADM-DT ADM divergent transcript HGNC:55516 ENSG00000254554 . 105376544 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.331124386 knock down up-regulate 0.013622346 REG00012 ADM-DT ADM divergent transcript HGNC:55516 ENSG00000254554 . 105376544 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.63663696 knock down up-regulate 4.26E-06 REG00012 ADM-DT ADM divergent transcript HGNC:55516 ENSG00000254554 . 105376544 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 6.575707483 knock down up-regulate 0.016876232 REG00012 LOC105376114 UBQLN1 antisense RNA 1 HGNC:55518 ENSG00000254473 . 105376114 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 WWP1-AS1 WWP1 antisense RNA 1 HGNC:55520 ENSG00000254231 . 105375624 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.777595757 knock down up-regulate 0.001494753 REG00012 CTD-2530N21.4 PIWIL2 divergent transcript HGNC:55522 ENSG00000254064 . 100507071 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . RIP-seq 29476152 GSE90639 Inf . . . REG00012 LOC101927752 CLN8 antisense RNA 1 HGNC:55523 ENSG00000253982 . 101927752 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CLN8-AS1 CLN8 antisense RNA 1 HGNC:55523 ENSG00000253982 . 101927752 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.251416363 knock down down-regulator 0.042127608 REG00012 CLN8-AS1 CLN8 antisense RNA 1 HGNC:55523 ENSG00000253982 . 101927752 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.434217489 knock down down-regulator 0.00089848 REG00012 MTUS1-DT MTUS1 divergent transcript HGNC:55525 ENSG00000253944 . 101930275 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.807483449 knock out up-regulate 0.000384314 REG00012 MTUS1-DT MTUS1 divergent transcript HGNC:55525 ENSG00000253944 . 101930275 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.218846013 knock down down-regulator 0.002839263 REG00012 MTUS1-DT MTUS1 divergent transcript HGNC:55525 ENSG00000253944 . 101930275 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.781337704 knock down down-regulator 0.027084227 REG00012 OXR1-AS1 OXR1 antisense RNA 1 HGNC:55533 ENSG00000253582 . 105375700 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.743154802 knock down down-regulator 8.88E-05 REG00012 OXR1-AS1 OXR1 antisense RNA 1 HGNC:55533 ENSG00000253582 . 105375700 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.842277914 knock down up-regulate 0.036245196 REG00012 LOC105379194 CTNNA1 antisense RNA 1 HGNC:55535 ENSG00000253404 . 105379194 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DENND3-AS1 DENND3 antisense RNA 1 HGNC:55537 ENSG00000253210 . 101927963 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.596143999 knock down down-regulator 0.024231361 REG00012 DENND3-AS1 DENND3 antisense RNA 1 HGNC:55537 ENSG00000253210 . 101927963 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.912257716 knock down up-regulate 0.000308892 REG00012 LOC102724404 NIPAL4 divergent transcript HGNC:55542 ENSG00000251405 . 102724404 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 CCNO-DT CCNO divergent transcript HGNC:55543 ENSG00000251307 . 121009647 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.599927143 knock down down-regulator 0.024540038 REG00012 CCNO-DT CCNO divergent transcript HGNC:55543 ENSG00000251307 . 121009647 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.198330595 knock down up-regulate 0.000169739 REG00012 MARCHF11-DT MARCHF11 divergent transcript HGNC:55550 ENSG00000250448 . 401176 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.609869463 knock down down-regulator 2.13E-06 REG00012 HEATR5A-DT HEATR5A divergent transcript HGNC:55552 ENSG00000250365 . 101927124 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 2.66405159 knock down up-regulate 0.016809515 REG00012 HEATR5A-DT HEATR5A divergent transcript HGNC:55552 ENSG00000250365 . 101927124 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.618490201 knock down up-regulate 5.37E-08 REG00012 USP38-DT USP38 divergent transcript HGNC:55554 ENSG00000250326 . 121009650 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.7583289 knock out down-regulator 0.040312111 REG00012 USP38-DT USP38 divergent transcript HGNC:55554 ENSG00000250326 . 121009650 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.704804619 knock down up-regulate 0.000926502 REG00012 NGFR-AS1 NGFR antisense RNA 1 HGNC:55555 ENSG00000249906 . 100288866 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.90778419 knock down up-regulate 0.000448611 REG00012 LOC101929340 ESAM antisense RNA 1 HGNC:55558 ENSG00000250073 . 101929340 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 SLC41A3-AS1 SLC41A3 antisense RNA 1 HGNC:55559 ENSG00000250012 . 112267887 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.791703832 knock out down-regulator 5.94E-05 REG00012 GJD2-DT GJD2 divergent transcript HGNC:55560 ENSG00000250007 . 101928174 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.821748859 knock down down-regulator 0.002378148 REG00012 ANKHD1-DT ANKHD1 divergent transcript HGNC:55564 ENSG00000249637 . 121232368 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.664588132 knock down down-regulator 1.83E-06 REG00012 LOC101926943 GTF2I antisense RNA 1 HGNC:55572 ENSG00000232729 . 101926943 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 TICAM2-AS1 TICAM2 antisense RNA 1 HGNC:55575 ENSG00000249249 . 101927100 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.074958662 knock out down-regulator 0.007190945 REG00012 FAM151B-DT FAM151B divergent transcript HGNC:55578 ENSG00000249042 . 121232370 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.715534987 knock down down-regulator 0.024842067 REG00012 HRAT5 PDCD6 divergent transcript HGNC:55580 ENSG00000248925 . 102467073 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC102724596 ZNF652 antisense RNA 1 HGNC:55582 ENSG00000248714 . 102724596 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC100507250 NUP107 divergent transcript HGNC:55587 ENSG00000247363 . 100507250 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 NUP107-DT NUP107 divergent transcript HGNC:55587 ENSG00000247363 . 100507250 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.713266756 knock down down-regulator 0.000102821 REG00012 NUP107-DT NUP107 divergent transcript HGNC:55587 ENSG00000247363 . 100507250 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.985678482 knock down up-regulate 0.000870382 REG00012 BTG1-DT BTG1 divergent transcript HGNC:55600 ENSG00000245904 . 101928617 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -0.793343128 knock down down-regulator 9.98E-06 REG00012 BTG1-DT BTG1 divergent transcript HGNC:55600 ENSG00000245904 . 101928617 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.662775491 knock down down-regulator 2.28E-05 REG00012 LOC101559451 PELP1 divergent transcript HGNC:55614 ENSG00000244184 . 101559451 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 PELP1-DT PELP1 divergent transcript HGNC:55614 ENSG00000244184 . 101559451 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.740468507 knock down down-regulator 0.012257196 REG00012 PELP1-DT PELP1 divergent transcript HGNC:55614 ENSG00000244184 . 101559451 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.249803648 knock down down-regulator 0.00052108 REG00012 PFN2-AS1 PFN2 antisense RNA 1 HGNC:55631 ENSG00000242791 . 121832804 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.847456408 knock down down-regulator 0.006629722 REG00012 PFN2-AS1 PFN2 antisense RNA 1 HGNC:55631 ENSG00000242791 . 121832804 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.599082194 knock down down-regulator 0.003872231 REG00012 EXO5-DT EXO5 divergent transcript HGNC:55647 ENSG00000238287 . 105378672 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.984997514 knock down down-regulator 0.007979587 REG00012 EXO5-DT EXO5 divergent transcript HGNC:55647 ENSG00000238287 . 105378672 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.603901318 knock down down-regulator 0.009959117 REG00012 CAMSAP1-DT CAMSAP1 divergent transcript HGNC:55648 ENSG00000238058 . 107987141 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.282731214 knock down up-regulate 0.000113939 REG00012 LOC100996263 TENT5C divergent transcript HGNC:55656 ENSG00000236866 . 100996263 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 ZNF747-DT ZNF747 divergent transcript HGNC:55668 ENSG00000235560 . 107984875 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.093809585 knock down up-regulate 0.027730051 REG00012 ZNF747-DT ZNF747 divergent transcript HGNC:55668 ENSG00000235560 . 107984875 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.33282154 knock down down-regulator 0.045831301 REG00012 DOCK7-DT DOCK7 divergent transcript HGNC:55670 ENSG00000235545 . 121832810 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.06515272 knock down down-regulator 0.030832906 REG00012 TMEM11-DT TMEM11 divergent transcript HGNC:55671 ENSG00000235530 . 107984969 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -2.010952054 knock down down-regulator 8.47E-06 REG00012 SCMH1-DT SCMH1 divergent transcript HGNC:55675 ENSG00000235358 . 121847982 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.889055409 knock down up-regulate 0.024081015 REG00012 SCMH1-DT SCMH1 divergent transcript HGNC:55675 ENSG00000235358 . 121847982 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.711014638 knock down down-regulator 0.000635684 REG00012 MICOS10-DT MICOS10 divergent transcript HGNC:55676 ENSG00000235185 . 105378614 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.628536407 knock down down-regulator 0.00344215 REG00012 GRK3-AS1 GRK3 antisense RNA 1 HGNC:55679 ENSG00000234884 . 100996404 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.747432921 knock down down-regulator 9.60E-06 REG00012 CDC20-DT CDC20 divergent transcript HGNC:55681 ENSG00000234694 . 105378687 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -3.863372956 knock down down-regulator 0.00314911 REG00012 CDC20-DT CDC20 divergent transcript HGNC:55681 ENSG00000234694 . 105378687 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.75950451 knock down up-regulate 0.017183811 REG00012 ERICH2-DT ERICH2 divergent transcript HGNC:55686 ENSG00000234350 . 101926913 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 1.043412487 knock down up-regulate 0.015349805 REG00012 GTF3C2-AS2 GTF3C2 antisense RNA 2 HGNC:55699 ENSG00000234072 . 105374363 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -4.72134752 knock down down-regulator 0.014061265 REG00012 GTF3C2-AS2 GTF3C2 antisense RNA 2 HGNC:55699 ENSG00000234072 . 105374363 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.906504727 knock down down-regulator 0.012366877 REG00012 FMNL1-AS1 FMNL1 antisense RNA 1 HGNC:55717 ENSG00000233175 . 107985040 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.597014479 knock down up-regulate 6.71E-05 REG00012 FMNL1-AS1 FMNL1 antisense RNA 1 HGNC:55717 ENSG00000233175 . 107985040 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.970224246 knock down down-regulator 0.016352158 REG00012 PANK1-AS1 PANK1 antisense RNA 1 HGNC:55718 ENSG00000232936 . 105378421 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.622215831 knock down up-regulate 0.000122935 REG00012 PANK1-AS1 PANK1 antisense RNA 1 HGNC:55718 ENSG00000232936 . 105378421 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.252082653 knock down up-regulate 0.000216761 REG00012 PANK1-AS1 PANK1 antisense RNA 1 HGNC:55718 ENSG00000232936 . 105378421 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.992161233 knock down down-regulator 0.015161709 REG00012 LOC100129620 PLPPR5 antisense RNA 1 HGNC:55720 ENSG00000232825 . 100129620 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 ING2-DT ING2 divergent transcript HGNC:55723 ENSG00000232648 . 389247 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.679017642 knock down up-regulate 0.000128949 REG00012 ING2-DT ING2 divergent transcript HGNC:55723 ENSG00000232648 . 389247 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.023403473 knock down up-regulate 2.98E-06 REG00012 LOC101929295 lncRNA imatinib upregulated HGNC:55755 ENSG00000245552 . 101929295 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC100132215 EHBP1 antisense RNA 1 HGNC:55766 ENSG00000231609 . 100132215 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EHBP1-AS1 EHBP1 antisense RNA 1 HGNC:55766 ENSG00000231609 . 100132215 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.405622535 knock down down-regulator 0.000349594 REG00012 EHBP1-AS1 EHBP1 antisense RNA 1 HGNC:55766 ENSG00000231609 . 100132215 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.815983326 knock down down-regulator 2.20E-05 REG00012 GNB1-DT GNB1 divergent transcript HGNC:55772 ENSG00000231050 . 105378949 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.428489621 knock down down-regulator 0.007963019 REG00012 CBR1-AS1 CBR1 antisense RNA 1 HGNC:55777 ENSG00000230212 . 100133286 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.648443215 knock down down-regulator 0.049947677 REG00012 CBR1-AS1 CBR1 antisense RNA 1 HGNC:55777 ENSG00000230212 . 100133286 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.730352701 knock down down-regulator 0.002842501 REG00012 FLJ31356 FOSL2 antisense RNA 1 HGNC:55784 ENSG00000229951 . 403150 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 DNPEP-AS1 DNPEP antisense RNA 1 HGNC:55789 ENSG00000229525 . 105373884 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -4.090130539 knock down down-regulator 0.000293276 REG00012 DNPEP-AS1 DNPEP antisense RNA 1 HGNC:55789 ENSG00000229525 . 105373884 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.831303412 knock down up-regulate 0.001715 REG00012 IDH3B-DT IDH3B divergent transcript HGNC:55798 ENSG00000228293 . 122152330 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 2.167037886 knock down up-regulate 0.010704433 REG00012 IDH3B-DT IDH3B divergent transcript HGNC:55798 ENSG00000228293 . 122152330 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 2.859474402 knock down up-regulate 0.021894679 REG00012 SPOPL-DT SPOPL divergent transcript HGNC:55802 ENSG00000228043 . 105373637 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.837263538 knock down down-regulator 0.003546691 REG00012 SPOPL-DT SPOPL divergent transcript HGNC:55802 ENSG00000228043 . 105373637 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -2.26405638 knock down down-regulator 0.036331943 REG00012 MYO1B-AS1 MYO1B antisense RNA 1 HGNC:55807 ENSG00000227542 . 122152331 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.101481607 knock down up-regulate 0.003373782 REG00012 MYO1B-AS1 MYO1B antisense RNA 1 HGNC:55807 ENSG00000227542 . 122152331 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.391285361 knock down up-regulate 0.000198755 REG00012 MYO1B-AS1 MYO1B antisense RNA 1 HGNC:55807 ENSG00000227542 . 122152331 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.129527691 knock down up-regulate 0.001106508 REG00012 MYO1B-AS1 MYO1B antisense RNA 1 HGNC:55807 ENSG00000227542 . 122152331 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.585879236 knock down up-regulate 0.04242393 REG00012 WDR35-DT WDR35 divergent transcript HGNC:55818 ENSG00000227210 . 101928222 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 1.456247845 knock down up-regulate 1.34E-12 REG00012 WDR35-DT WDR35 divergent transcript HGNC:55818 ENSG00000227210 . 101928222 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.683543705 knock down down-regulator 0.000288081 REG00012 YAE1-DT YAE1 divergent transcript HGNC:55820 ENSG00000227172 . 105375240 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.992663164 knock down up-regulate 0.000294818 REG00012 YAE1-DT YAE1 divergent transcript HGNC:55820 ENSG00000227172 . 105375240 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.8269881 knock down down-regulator 1.41E-09 REG00012 R3HDML-AS1 R3HDML antisense RNA 1 HGNC:55830 ENSG00000226812 . 105372629 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.938696738 knock out down-regulator 0.002671225 REG00012 TSPAN14-AS1 TSPAN14 antisense RNA 1 HGNC:55833 ENSG00000226659 . 101929574 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.156030503 knock down down-regulator 0.000495914 REG00012 TSPAN14-AS1 TSPAN14 antisense RNA 1 HGNC:55833 ENSG00000226659 . 101929574 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.582505965 knock down up-regulate 0.004453204 REG00012 PPP1R15B-AS1 PPP1R15B and PIK3C2B antisense RNA 1 HGNC:55838 ENSG00000226330 . 122455336 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.757 knock down up-regulate 0.001374 REG00012 PPP1R15B-AS1 PPP1R15B and PIK3C2B antisense RNA 1 HGNC:55838 ENSG00000226330 . 122455336 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.6102 knock down up-regulate 0.004589 REG00012 LOC101928118 RWDD3 divergent transcript HGNC:55839 ENSG00000226026 . 101928118 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ZFAND3-DT ZFAND3 divergent transcript HGNC:55841 ENSG00000225945 . 107986593 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.489159166 knock down down-regulator 1.15E-08 REG00012 ZFAND3-DT ZFAND3 divergent transcript HGNC:55841 ENSG00000225945 . 107986593 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.585100419 knock down up-regulate 0.000877658 REG00012 ZFAND3-DT ZFAND3 divergent transcript HGNC:55841 ENSG00000225945 . 107986593 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.054119616 knock down down-regulator 3.77E-05 REG00012 S1PR1-DT S1PR1 divergent transcript HGNC:55842 ENSG00000225938 . 101928370 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.713563268 knock down down-regulator 0.002629159 REG00012 ANKRD65-AS1 ANKRD65 antisense RNA 1 HGNC:55844 ENSG00000225905 . 105378585 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.731664709 knock down down-regulator 0.049304192 REG00012 ANKRD65-AS1 ANKRD65 antisense RNA 1 HGNC:55844 ENSG00000225905 . 105378585 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 5.348744135 knock down up-regulate 0.008183273 REG00012 LOC105375304 SNX10 antisense RNA 1 HGNC:55845 ENSG00000225792 . 105375304 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LMX1B-DT LMX1B divergent transcript HGNC:55849 ENSG00000224842 . 105376277 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 2.759517832 knock down up-regulate 0.030872594 REG00012 HEXIM2-AS1 HEXIM2 antisense RNA 1 HGNC:55857 ENSG00000224505 . 112268203 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.247426376 knock down down-regulator 0.001994894 REG00012 HEXIM2-AS1 HEXIM2 antisense RNA 1 HGNC:55857 ENSG00000224505 . 112268203 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.325712119 knock down up-regulate 0.010801784 REG00012 HEXIM2-AS1 HEXIM2 antisense RNA 1 HGNC:55857 ENSG00000224505 . 112268203 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -2.711913353 knock down down-regulator 0.023996131 REG00012 HEXIM2-AS1 HEXIM2 antisense RNA 1 HGNC:55857 ENSG00000224505 . 112268203 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.90991549 knock down up-regulate 0.032179207 REG00012 HEXIM2-AS1 HEXIM2 antisense RNA 1 HGNC:55857 ENSG00000224505 . 112268203 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.4043567 knock down down-regulator 0.017575677 REG00012 HEXIM2-AS1 HEXIM2 antisense RNA 1 HGNC:55857 ENSG00000224505 . 112268203 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.123893783 knock down down-regulator 0.040021008 REG00012 BAZ2B-AS1 BAZ2B antisense RNA 1 HGNC:55862 ENSG00000224152 . 643072 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.761045844 knock down down-regulator 0.013770508 REG00012 CALCRL-AS1 CALCRL and TFPI antisense RNA 1 HGNC:55863 ENSG00000224063 . 105373786 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.981263824 knock down up-regulate 0.00010973 REG00012 CALCRL-AS1 CALCRL and TFPI antisense RNA 1 HGNC:55863 ENSG00000224063 . 105373786 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.744263129 knock down up-regulate 0.002799345 REG00012 MYH9-DT MYH9 divergent transcript HGNC:55867 ENSG00000223695 . 105377199 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -0.599468009 knock down down-regulator 0.000635995 REG00012 NUP133-DT NUP133 divergent transcript HGNC:55870 ENSG00000223635 . 101927478 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.747956322 knock down down-regulator 0.004464729 REG00012 NUP133-DT NUP133 divergent transcript HGNC:55870 ENSG00000223635 . 101927478 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.894227018 knock down down-regulator 0.043715499 REG00012 LOC100506100 ZDHHC12 divergent transcript HGNC:55873 ENSG00000223478 . 100506100 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 ZDHHC12-DT ZDHHC12 divergent transcript HGNC:55873 ENSG00000223478 . 100506100 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.930539433 knock down up-regulate 6.95E-07 REG00012 ZDHHC12-DT ZDHHC12 divergent transcript HGNC:55873 ENSG00000223478 . 100506100 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 3.021710044 knock down up-regulate 0.022884096 REG00012 ZDHHC12-DT ZDHHC12 divergent transcript HGNC:55873 ENSG00000223478 . 100506100 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.601226471 knock down down-regulator 0.001249451 REG00012 LINC02933 Long intergenic non-protein coding RNA 2933 HGNC:55908 ENSG00000266289 . 122965334 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 0.965487511 knock down up-regulate 9.21E-11 REG00012 LINC02933 Long intergenic non-protein coding RNA 2933 HGNC:55908 ENSG00000266289 . 122965334 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 1.917432128 knock down up-regulate 0.000156532 REG00012 FLRT2-AS1 FLRT2 antisense RNA 1 HGNC:55912 ENSG00000205562 . 100506731 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.883324013 knock out down-regulator 0.001503975 REG00012 RPL26L1-AS1 RPL26L1 antisense RNA 1 HGNC:55914 ENSG00000204758 . 100268168 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.47529369 knock down up-regulate 0.021192347 REG00012 RPL26L1-AS1 RPL26L1 antisense RNA 1 HGNC:55914 ENSG00000204758 . 100268168 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.67001599 knock down down-regulator 0.023561805 REG00012 ZNF225-AS1 ZNF225 and ZNF224 antisense RNA 1 HGNC:55916 ENSG00000186019 . 100379224 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -2.088478291 knock down down-regulator 0.011866043 REG00012 TOX-DT TOX divergent transcript HGNC:55935 ENSG00000167912 . 100505501 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.78502392 knock out up-regulate 0.019960171 REG00012 FLJ37453 SPEN antisense RNA 1 HGNC:55937 ENSG00000179743 . 729614 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 SPEN-AS1 SPEN antisense RNA 1 HGNC:55937 ENSG00000179743 . 729614 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.401250544 knock out down-regulator 0.019884437 REG00012 LINC02936 Long intergenic non-protein coding RNA 2936 HGNC:55940 ENSG00000227359 . 123464517 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.018742331 knock down down-regulator 2.91E-19 REG00012 LINC02937 Long intergenic non-protein coding RNA 2937 HGNC:55942 ENSG00000230537 . 100507103 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.64562159 knock down down-regulator 7.51E-11 REG00012 LINC02937 Long intergenic non-protein coding RNA 2937 HGNC:55942 ENSG00000230537 . 100507103 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.90012292 knock down up-regulate 2.44E-05 REG00012 LINC02940 Long intergenic non-protein coding RNA 2940 HGNC:55955 ENSG00000235888 . 102724740 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.024362139 knock down up-regulate 5.81E-09 REG00012 LINC02940 Long intergenic non-protein coding RNA 2940 HGNC:55955 ENSG00000235888 . 102724740 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.25240027 knock down up-regulate 4.26E-51 REG00012 LINC02948 Long intergenic non-protein coding RNA 2948 HGNC:55963 ENSG00000253182 . 105379351 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 3.127996473 knock out up-regulate 1.78E-15 REG00012 LINC02950 Long intergenic non-protein coding RNA 2950 HGNC:55965 ENSG00000254153 . 123466212 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.431622255 knock down up-regulate 5.13E-07 REG00012 LINC02950 Long intergenic non-protein coding RNA 2950 HGNC:55965 ENSG00000254153 . 123466212 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.344380578 knock down down-regulator 4.26E-29 REG00012 LINC02950 Long intergenic non-protein coding RNA 2950 HGNC:55965 ENSG00000254153 . 123466212 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.911884975 knock down down-regulator 0.000100079 REG00012 LINC02950 Long intergenic non-protein coding RNA 2950 HGNC:55965 ENSG00000254153 . 123466212 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.727356753 knock down down-regulator 1.58E-19 REG00012 MIR130AHG MIR130A host gene HGNC:55966 ENSG00000254602 . 123466203 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 0.640879913 knock down up-regulate 0.004737518 REG00012 SLC25A28-DT SLC25A28 divergent transcript HGNC:55979 ENSG00000260475 . 123466211 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.03936825 knock down down-regulator 2.25E-06 REG00012 MIR142HG MIR142 host genes HGNC:55980 ENSG00000265206 . 123466215 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.596955023 knock down down-regulator 0.008748867 REG00012 MIR142HG MIR142 host genes HGNC:55980 ENSG00000265206 . 123466215 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.822869271 knock down down-regulator 0.006361681 REG00012 LINC02962 Long intergenic non-protein coding RNA 2962 HGNC:55988 ENSG00000236427 . 112268240 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 1.63340709 knock down up-regulate 1.02E-05 REG00012 LINC02962 Long intergenic non-protein coding RNA 2962 HGNC:55988 ENSG00000236427 . 112268240 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.694083105 knock down down-regulator 3.07E-14 REG00012 ICAM4-AS1 ICAM4 antisense RNA 1 HGNC:55990 ENSG00000267607 . 123706506 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -3.562795048 knock down down-regulator 0.01716814 REG00012 ICAM4-AS1 ICAM4 antisense RNA 1 HGNC:55990 ENSG00000267607 . 123706506 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 3.078340588 knock down up-regulate 0.016940026 REG00012 LINC02966 Long intergenic non-protein coding RNA 2966 HGNC:56006 ENSG00000234997 . 101927400 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.246400873 knock down down-regulator 0.000117454 REG00012 LINC02966 Long intergenic non-protein coding RNA 2966 HGNC:56006 ENSG00000234997 . 101927400 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -2.269162083 knock down down-regulator 0.018627753 REG00012 LINC02966 Long intergenic non-protein coding RNA 2966 HGNC:56006 ENSG00000234997 . 101927400 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.470535059 knock down down-regulator 9.06E-38 REG00012 LINC02966 Long intergenic non-protein coding RNA 2966 HGNC:56006 ENSG00000234997 . 101927400 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 2.014809877 knock down up-regulate 3.49E-72 REG00012 LINC02966 Long intergenic non-protein coding RNA 2966 HGNC:56006 ENSG00000234997 . 101927400 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.103402721 knock down up-regulate 5.50E-75 REG00012 LINC02972 Long intergenic non-protein coding RNA 2972 HGNC:56013 ENSG00000249790 . 123706525 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.675481678 knock down up-regulate 0.000148221 REG00012 LINC02972 Long intergenic non-protein coding RNA 2972 HGNC:56013 ENSG00000249790 . 123706525 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.896968572 knock down down-regulator 2.38E-06 REG00012 LOC400710 ZNF473 cis regulating lncRNA HGNC:56021 ENSG00000204666 . 400710 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02976 Long intergenic non-protein coding RNA 2976 HGNC:56026 ENSG00000231113 . 123706548 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.715929933 knock down up-regulate 3.04E-10 REG00012 ZNF584-DT ZNF584 divergent transcript HGNC:56027 ENSG00000232098 . 123706526 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 2.332040242 knock down up-regulate 0.004824206 REG00012 ZNF584-DT ZNF584 divergent transcript HGNC:56027 ENSG00000232098 . 123706526 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -5.145133733 knock down down-regulator 0.016864094 REG00012 MVP-DT MVP divergent transcript HGNC:56029 ENSG00000238045 . 123706527 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.305503296 knock down down-regulator 0.01151745 REG00012 MVP-DT MVP divergent transcript HGNC:56029 ENSG00000238045 . 123706527 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.905466239 knock down down-regulator 0.027200917 REG00012 MVP-DT MVP divergent transcript HGNC:56029 ENSG00000238045 . 123706527 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.736686312 knock down down-regulator 0.035444446 REG00012 MVP-DT MVP divergent transcript HGNC:56029 ENSG00000238045 . 123706527 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.861280658 knock down up-regulate 0.007148086 REG00012 LOC100996419 MRNIP divergent transcript HGNC:56030 ENSG00000245317 . 100996419 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MTA1-DT MTA1 divergent transcript HGNC:56032 ENSG00000251602 . 100507437 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 -1.354582818 knock down down-regulator 0.042252572 REG00012 MTA1-DT MTA1 divergent transcript HGNC:56032 ENSG00000251602 . 100507437 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.596206146 knock down down-regulator 0.002436263 REG00012 MTA1-DT MTA1 divergent transcript HGNC:56032 ENSG00000251602 . 100507437 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.047437844 knock down down-regulator 0.013032535 REG00012 ZNF778-DT ZNF778 divergent transcript HGNC:56034 ENSG00000259877 . 123706547 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -2.096544164 knock down down-regulator 0.033118698 REG00012 ZNF778-DT ZNF778 divergent transcript HGNC:56034 ENSG00000259877 . 123706547 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -1.231683561 knock down down-regulator 0.029217961 REG00012 LOC105371049 PKD1 antisense RNA 1 HGNC:56035 ENSG00000259933 . 105371049 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 DSP-AS1 DSP antisense RNA 1 HGNC:56039 ENSG00000261189 . 101928076 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.197828515 knock out down-regulator 0.003445611 REG00012 DPH1-AS1 DPH1 antisense RNA 1 HGNC:56040 ENSG00000263050 . 123706529 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.614080851 knock down down-regulator 0.017454898 REG00012 ATP8B1-AS1 ATP8B1 antisense RNA 1 HGNC:56042 ENSG00000267040 . 100505549 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -3.093982992 knock down down-regulator 1.02E-05 REG00012 ATP8B1-AS1 ATP8B1 antisense RNA 1 HGNC:56042 ENSG00000267040 . 100505549 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 1.004361113 knock down up-regulate 5.16E-08 REG00012 LINC02980 Long intergenic non-protein coding RNA 2980 HGNC:56046 ENSG00000272462 . 123706533 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.874289026 knock down up-regulate 2.57E-14 REG00012 LINC02980 Long intergenic non-protein coding RNA 2980 HGNC:56046 ENSG00000272462 . 123706533 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.03035151 knock down up-regulate 0.000373445 REG00012 JTB-DT JTB divergent transcript HGNC:56047 ENSG00000272654 . 123706540 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.712356634 knock down up-regulate 0.000447033 REG00012 JTB-DT JTB divergent transcript HGNC:56047 ENSG00000272654 . 123706540 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.865035548 knock down up-regulate 0.000536343 REG00012 SLC16A4-AS1 SLC16A4 antisense RNA 1 HGNC:56051 ENSG00000273373 . 123706514 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 1.08927077 knock down up-regulate 0.000373453 REG00012 SLC16A4-AS1 SLC16A4 antisense RNA 1 HGNC:56051 ENSG00000273373 . 123706514 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.907539031 knock down up-regulate 0.000131654 REG00012 CKAP2-DT CKAP2 divergent transcript HGNC:56053 ENSG00000278238 . 123706541 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.622600551 knock down down-regulator 0.034108938 REG00012 CKAP2-DT CKAP2 divergent transcript HGNC:56053 ENSG00000278238 . 123706541 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.349046623 knock down down-regulator 0.009733322 REG00012 LOC101929523 THBS2 antisense RNA 1 HGNC:56059 ENSG00000226445 . 101929523 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC02983 Long intergenic non-protein coding RNA 2983 HGNC:56060 ENSG00000234432 . 100129484 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 0.625075542 knock down up-regulate 3.78E-06 REG00012 LINC02984 Long intergenic non-protein coding RNA 2984 HGNC:56063 ENSG00000237807 . 100507516 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.638910471 knock down up-regulate 2.82E-05 REG00012 LINC02984 Long intergenic non-protein coding RNA 2984 HGNC:56063 ENSG00000237807 . 100507516 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.598961164 knock down down-regulator 1.43E-10 REG00012 LINC02984 Long intergenic non-protein coding RNA 2984 HGNC:56063 ENSG00000237807 . 100507516 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.667055054 knock down up-regulate 4.64E-56 REG00012 TENM2-AS1 TENM2 antisense RNA 2 HGNC:56066 ENSG00000253978 . 101927862 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 0.722797688 knock out up-regulate 0.007164056 REG00012 CAPN1-AS1 CAPN1 antisense RNA 1 HGNC:56068 ENSG00000254614 . 728975 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.863637843 knock down up-regulate 0.000188978 REG00012 CAPN1-AS1 CAPN1 antisense RNA 1 HGNC:56068 ENSG00000254614 . 728975 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -0.626951749 knock down down-regulator 2.12E-05 REG00012 CAPN1-AS1 CAPN1 antisense RNA 1 HGNC:56068 ENSG00000254614 . 728975 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.936974043 knock down up-regulate 1.31E-05 REG00012 CAPN1-AS1 CAPN1 antisense RNA 1 HGNC:56068 ENSG00000254614 . 728975 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.685585905 knock down down-regulator 0.009119429 REG00012 TIRAP-AS1 TIRAP antisense RNA 1 HGNC:56069 ENSG00000255062 . 105369557 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -3.36392091 knock down down-regulator 4.27E-07 REG00012 TIRAP-AS1 TIRAP antisense RNA 1 HGNC:56069 ENSG00000255062 . 105369557 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.407477836 knock down down-regulator 0.00223155 REG00012 TIRAP-AS1 TIRAP antisense RNA 1 HGNC:56069 ENSG00000255062 . 105369557 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.995057507 knock down up-regulate 0.001576699 REG00012 TIRAP-AS1 TIRAP antisense RNA 1 HGNC:56069 ENSG00000255062 . 105369557 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.838043721 knock down down-regulator 0.001366592 REG00012 LOC102724064 B4GAT1 divergent transcript HGNC:56070 ENSG00000255468 . 102724064 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 B4GAT1-DT B4GAT1 divergent transcript HGNC:56070 ENSG00000255468 . 102724064 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 0.675808691 knock down up-regulate 1.54E-31 REG00012 B4GAT1-DT B4GAT1 divergent transcript HGNC:56070 ENSG00000255468 . 102724064 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 1.548773673 knock down up-regulate 0.013663758 REG00012 LOC100506691 long intergenic non-protein coding RNA 2985 HGNC:56073 ENSG00000256546 . 100506691 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 EIF5-DT EIF5 divergent transcript HGNC:56080 ENSG00000259775 . 123706522 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.699632651 knock down down-regulator 0.010476038 REG00012 EIF5-DT EIF5 divergent transcript HGNC:56080 ENSG00000259775 . 123706522 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -0.628508347 knock down down-regulator 8.56E-07 REG00012 MIR30DHG MIR30D and MIR30B host gene HGNC:56081 ENSG00000259820 . 102723694 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.119521673 knock down down-regulator 0.010924944 REG00012 MIR30DHG MIR30D and MIR30B host gene HGNC:56081 ENSG00000259820 . 102723694 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 1.616468462 knock down up-regulate 0.010120572 REG00012 TRMT61A-DT TRMT61A divergent transcript HGNC:56082 ENSG00000260285 . 123706535 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -2.137742746 knock down down-regulator 0.009946809 REG00012 TRMT61A-DT TRMT61A divergent transcript HGNC:56082 ENSG00000260285 . 123706535 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -2.165225764 knock down down-regulator 0.012376776 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 29660014 GSE109604 1.027026279 knock down up-regulate 1.72E-05 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.458949009 knock down down-regulator 0.004271043 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 0.904003237 knock down up-regulate 0.009369894 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.848220527 knock down down-regulator 0.015220033 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -1.17200535 knock down down-regulator 0.029501369 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.153800737 knock down up-regulate 0.004203021 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 -0.710555641 knock down down-regulator 0.009493049 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 1.832069057 knock down up-regulate 7.59E-05 REG00012 CTNS-AS1 CTNS antisense RNA 1 HGNC:56090 ENSG00000262903 . 105371492 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.985189557 knock down up-regulate 0.006861905 REG00012 PP14571 GPC1 antisense RNA 1 HGNC:56102 ENSG00000218416 . 100130449 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC100129917 PCGF3 antisense RNA 1 HGNC:56108 ENSG00000249592 . 100129917 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 LOC101928978 long intergenic non-protein coding RNA 2994 HGNC:56109 ENSG00000250546 . 101928978 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 LOC102724776 MAP9 antisense RNA 1 HGNC:56110 ENSG00000250910 . 102724776 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 LINC03006 Long intergenic non-protein coding RNA 3006 HGNC:56131 ENSG00000272693 . 441242 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.159943325 knock down down-regulator 8.31E-36 REG00012 LINC03006 Long intergenic non-protein coding RNA 3006 HGNC:56131 ENSG00000272693 . 441242 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 0.921962749 knock down up-regulate 1.69E-08 REG00012 LOC100133091 long intergenic non-protein coding RNA 3009 HGNC:56134 ENSG00000205485 . 100133091 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 GS1-124K5.4 long intergenic non-protein coding RNA 3011 HGNC:56136 ENSG00000237310 . 100289098 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 STEAP1B-AS1 STEAP1B antisense RNA 1 HGNC:56137 ENSG00000232759 . 100506178 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -1.032269811 knock down down-regulator 0.002890547 REG00012 STEAP1B-AS1 STEAP1B antisense RNA 1 HGNC:56137 ENSG00000232759 . 100506178 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -1.404609233 knock out down-regulator 0.018478068 REG00012 STEAP1B-AS1 STEAP1B antisense RNA 1 HGNC:56137 ENSG00000232759 . 100506178 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.200173801 knock down down-regulator 9.37E-05 REG00012 STEAP1B-AS1 STEAP1B antisense RNA 1 HGNC:56137 ENSG00000232759 . 100506178 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 -1.035433061 knock down down-regulator 0.0054633 REG00012 STEAP1B-AS1 STEAP1B antisense RNA 1 HGNC:56137 ENSG00000232759 . 100506178 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -1.61002479 knock down down-regulator 0.019902263 REG00012 LOC100506497 CPVL antisense RNA 2 HGNC:56138 ENSG00000272568 . 100506497 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 CPVL-AS2 CPVL antisense RNA 2 HGNC:56138 ENSG00000272568 . 100506497 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.097584582 knock down up-regulate 0.000501468 REG00012 CPVL-AS2 CPVL antisense RNA 2 HGNC:56138 ENSG00000272568 . 100506497 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.654667692 knock down up-regulate 0.001100006 REG00012 FAM131B-AS2 FAM131B antisense RNA 2 HGNC:56141 ENSG00000232533 . 100507507 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.851341044 knock down up-regulate 0.020200857 REG00012 FAM131B-AS2 FAM131B antisense RNA 2 HGNC:56141 ENSG00000232533 . 100507507 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.789392234 knock down up-regulate 0.002956708 REG00012 PPP1R3B-DT PPP1R3B divergent transcript HGNC:56150 ENSG00000248538 . 102724880 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.6694 knock down up-regulate 0.01125 REG00012 ADAM7-AS1 ADAM7, ADAMDEC1 and ADAM28 antisense RNA 1 HGNC:56152 ENSG00000253535 . 101929294 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 0.693599552 knock down up-regulate 0.009254373 REG00012 ADAM7-AS1 ADAM7, ADAMDEC1 and ADAM28 antisense RNA 1 HGNC:56152 ENSG00000253535 . 101929294 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.650754277 knock down down-regulator 0.019905312 REG00012 ADAM7-AS1 ADAM7, ADAMDEC1 and ADAM28 antisense RNA 1 HGNC:56152 ENSG00000253535 . 101929294 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 2.85483478 knock down up-regulate 6.16E-05 REG00012 SYT15-AS1 SYT15 antisense RNA 1 HGNC:56167 ENSG00000231187 . 101927699 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 30371874 GSE116059 -0.97109391 knock down down-regulator 0.031658695 REG00012 SYT15-AS1 SYT15 antisense RNA 1 HGNC:56167 ENSG00000231187 . 101927699 Long non-coding RNA Long non-coding Huh-7 cell line CVCL_0336 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 30371874 GSE116133 -1.043221065 knock down down-regulator 0.000196749 REG00012 SYT15-AS1 SYT15 antisense RNA 1 HGNC:56167 ENSG00000231187 . 101927699 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.836698548 knock down up-regulate 0.004072714 REG00012 SYT15-AS1 SYT15 antisense RNA 1 HGNC:56167 ENSG00000231187 . 101927699 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -1.695368531 knock down down-regulator 0.0136982 REG00012 SYT15-AS1 SYT15 antisense RNA 1 HGNC:56167 ENSG00000231187 . 101927699 Long non-coding RNA Long non-coding ES-2 cell line CVCL_3509 Homo sapiens Ovarian cancer 2C73: Ovarian cancer RNA-seq 33829040 GSE161087 0.634246038 knock down up-regulate 0.024891694 REG00012 SYT9-AS1 SYT9 antisense RNA 1 HGNC:56173 ENSG00000251364 . 100506258 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.972955145 knock down down-regulator 0.013178964 REG00012 CD44-DT CD44 divergent transcript HGNC:56175 ENSG00000255521 . 100507144 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 1.228306838 knock down up-regulate 0.00274625 REG00012 CD44-DT CD44 divergent transcript HGNC:56175 ENSG00000255521 . 100507144 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 2.818648647 knock down up-regulate 0.001394092 REG00012 CD44-DT CD44 divergent transcript HGNC:56175 ENSG00000255521 . 100507144 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 0.874435745 knock down up-regulate 0.039988121 REG00012 CD44-DT CD44 divergent transcript HGNC:56175 ENSG00000255521 . 100507144 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -4.344128024 knock down down-regulator 0.004489885 REG00012 SLC38A4-AS1 SLC38A4 antisense RNA 1 HGNC:56178 ENSG00000257261 . 100288798 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146546 -0.606588538 knock out down-regulator 0.039751427 REG00012 LOC101929162 PRDM4 antisense RNA 1 HGNC:56186 ENSG00000258136 . 101929162 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 MIR3171HG MIR3171 host gene HGNC:56193 ENSG00000258932 . 728755 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 32761127 GSE146803 -0.620696892 knock down down-regulator 0.039467271 REG00012 MIDEAS-AS1 MIDEAS antisense RNA 1 HGNC:56194 ENSG00000259065 . 100506476 Long non-coding RNA Long non-coding A549 CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 32761127 GSE146547 -1.412391686 knock down down-regulator 0.003007198 REG00012 MIDEAS-AS1 MIDEAS antisense RNA 1 HGNC:56194 ENSG00000259065 . 100506476 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.647329173 knock down down-regulator 0.032226068 REG00012 MIDEAS-AS1 MIDEAS antisense RNA 1 HGNC:56194 ENSG00000259065 . 100506476 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.961099182 knock down down-regulator 0.027688023 REG00012 MIDEAS-AS1 MIDEAS antisense RNA 1 HGNC:56194 ENSG00000259065 . 100506476 Long non-coding RNA Long non-coding A549 cell line CVCL_0023 Homo sapiens Lung adenocarcinoma 2C25: Lung cancer RNA-seq 33829040 GSE161087 0.646407776 knock down up-regulate 0.004524412 REG00012 MIDEAS-AS1 MIDEAS antisense RNA 1 HGNC:56194 ENSG00000259065 . 100506476 Long non-coding RNA Long non-coding MV3 cell line CVCL_W280 Homo sapiens Amelanotic melanoma 2C30: Melanoma RNA-seq 33829040 GSE161087 -0.99646523 knock down down-regulator 6.83E-05 REG00012 GTF2A1-AS1 GTF2A1 antisense RNA 1 HGNC:56195 ENSG00000273783 . 101928504 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 0.662324671 knock down up-regulate 0.000202182 REG00012 GTF2A1-AS1 GTF2A1 antisense RNA 1 HGNC:56195 ENSG00000273783 . 101928504 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 0.769294465 knock down up-regulate 2.37E-36 REG00012 LINC03036 Long intergenic non-protein coding RNA 3036 HGNC:56220 ENSG00000229272 . 125177373 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 0.60223924 knock down up-regulate 0.009869644 REG00012 LINC03037 Long intergenic non-protein coding RNA 3037 HGNC:56227 ENSG00000230952 . 125177375 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 1.491312994 knock down up-regulate 0.014721189 REG00012 LINC03037 Long intergenic non-protein coding RNA 3037 HGNC:56227 ENSG00000230952 . 125177375 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.613308916 knock down up-regulate 1.65E-06 REG00012 SYNM-AS2 SYNM antisense RNA 2 HGNC:56228 ENSG00000261054 . 125177379 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -1.208504959 knock down down-regulator 0.020153197 REG00012 PRR11-AS1 PRR11 antisense RNA 1 HGNC:56242 ENSG00000265415 . 0 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.673179666 knock down down-regulator 0.005735071 REG00012 LINC03038 Long intergenic non-protein coding RNA 3038 HGNC:56244 ENSG00000274225 . 124905036 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.964861201 knock down down-regulator 2.57E-05 REG00012 LINC03038 Long intergenic non-protein coding RNA 3038 HGNC:56244 ENSG00000274225 . 124905036 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 2.597126475 knock down up-regulate 4.30E-44 REG00012 ACE2-DT ACE2 divergent transcript HGNC:56255 ENSG00000225833 . 104798195 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -0.622463765 knock down down-regulator 0.010485566 REG00012 ACE2-DT ACE2 divergent transcript HGNC:56255 ENSG00000225833 . 104798195 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 1.415051322 knock down up-regulate 6.02E-05 REG00012 LOC100506406 CAPSL divergent transcript HGNC:56266 ENSG00000249748 . 100506406 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507 . . . . REG00012 INE1 Inactivation escape 1 HGNC:6060 ENSG00000224975 INE1_HUMAN 8552 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 IPW Imprinted in Prader-Willi syndrome HGNC:6109 . . 3653 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 KCNQ1OT1 KCNQ1 opposite strand/antisense transcript 1 HGNC:6295 ENSG00000269821 . 10984 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE78507; GSE92021 . . . . REG00012 PVT1 Pvt1 oncogene HGNC:9709 ENSG00000249859 . 5820 Long non-coding RNA Long non-coding HEK293T CVCL_0063 Homo sapiens Normal . eCLIP-seq 29476152 GSE92021 . . . . REG00012 PVT1 Pvt1 oncogene HGNC:9709 ENSG00000249859 . 5820 Long non-coding RNA Long non-coding HepG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 32761127 GSE146802 -1.063830082 knock down down-regulator 0.001760368 REG00012 PVT1 Pvt1 oncogene HGNC:9709 ENSG00000249859 . 5820 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq . GSE146805 -1.00762499 knock down down-regulator 0.000804168 REG00012 PVT1 Pvt1 oncogene HGNC:9709 ENSG00000249859 . 5820 Long non-coding RNA Long non-coding HEPG2 CVCL_0027 Homo sapiens Hepatocellular carcinoma 2C12: Liver cancer RNA-seq 33829040 GSE161086 -0.94639713 knock down down-regulator 0.004916368 REG00012 PVT1 Pvt1 oncogene HGNC:9709 ENSG00000249859 . 5820 Long non-coding RNA Long non-coding PANC-1 cell line CVCL_0480 Homo sapiens Pancreatic ductal adenocarcinoma 2C10: Pancreatic cancer RNA-seq 33829040 GSE161087 -0.611460456 knock down down-regulator 0.045248341 REG00012 RFPL3S RFPL3 antisense HGNC:9981 ENSG00000205853 RFL3S_HUMAN 10737 Long non-coding RNA Long non-coding BE2C . Homo sapiens Healthy . RNA-seq 33829040 GSE161086 -0.832724611 knock down down-regulator 4.92E-05